BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0171.0004.p (392 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KFN3.1 B3KFN3_9BACI Galactokinase 569 e-160 B1DH22.1 B1DH22_9BACL Galactokinase 511 e-143 B0K6A9.1 B0K6A9_THEPX Galactokinase 408 e-112 B0K7L8.1 B0K7L8_THEP3 Galactokinase 406 e-111 Q8R8R7.1 GAL1_THETN Galactokinase EC=2.7.1.6 399 e-109 >B3KFN3.1 B3KFN3_9BACI Galactokinase Length = 392 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 272/389 (69%), Positives = 323/389 (83%) Query: 1 MSLQDLKVKFIEKYGKSTEEVRVFYAPGRVNLIGEHLDYNGGYVFPAALDFGTTLIVRPR 60 M+ Q L +F++K+G+S +VR+F APGRVNLIGEHLDYNGGYV PAAL+FGTTLI+RPR Sbjct: 1 MTTQQLMERFMDKHGESQHKVRIFNAPGRVNLIGEHLDYNGGYVLPAALEFGTTLIIRPR 60 Query: 61 SDGKVQFASTNFPYEASIDYSEIGKAKTGEWVDYPVGVMVELAKKDLPVSAGYDLLFHGE 120 D KV F+STN PYE +I E K +W DYPVGV+ EL K +S+GYDLL+HG+ Sbjct: 61 DDNKVSFSSTNIPYELTISLDEDYGYKIDQWTDYPVGVITELNKIGCGLSSGYDLLYHGD 120 Query: 121 IPNGSGLSSSASIEVVTGFAFLTLLGGDTDTVEIALLSQRAENQYVGVNSGIMDQFAVAN 180 IPNG+GLSSSASIEVVT +AFL + G +TDTVEIA LSQR EN +VGVNSGIMDQFAVAN Sbjct: 121 IPNGAGLSSSASIEVVTAYAFLKMEGKETDTVEIAKLSQRVENLFVGVNSGIMDQFAVAN 180 Query: 181 GKRDQAILLMCDTLEYSLIPFVTGSYKLVISNTNKKRGLVDSKYNERRSQCEEALAILKQ 240 GK+D AILLMCDTLEY L+PF TG+YK+VISNTNK+RGLVDSKYNERRS+C+ AL IL++ Sbjct: 181 GKQDHAILLMCDTLEYELVPFRTGAYKIVISNTNKRRGLVDSKYNERRSECDRALEILQK 240 Query: 241 EVPGLSYLAELKPEQFEAHKDKITDETVQRRARHVVEENQRVLDSVELLKQNDLKQFGLY 300 E+P LSYLA+L P+QF +D I DETV+RRA+HVVEENQRVLDSV+ LK+ +L+ FG Y Sbjct: 241 ELPALSYLAQLNPDQFATLRDSIQDETVRRRAQHVVEENQRVLDSVKALKEGNLEVFGQY 300 Query: 301 MNDSHVSLRDLYEVSCEELDVMVEEAQKIPGTLGSRMTGAGFGGCTVSLVHENDVERFIR 360 MN SH SLR LYEV+ +ELD +VEEAQ+IPGTLGSRMTGAGFGGCTVSLVHE+ VERFI Sbjct: 301 MNQSHDSLRYLYEVTGDELDALVEEAQRIPGTLGSRMTGAGFGGCTVSLVHEDAVERFIA 360 Query: 361 EVGEAYRTRTGLIGEFYVCGIGNGVEELK 389 EVG+ Y RTGL +FYVCG+G GV E+K Sbjct: 361 EVGQQYEARTGLKADFYVCGVGQGVHEVK 389 >B1DH22.1 B1DH22_9BACL Galactokinase Length = 390 Score = 511 bits (1316), Expect = e-143, Method: Compositional matrix adjust. Identities = 243/388 (62%), Positives = 301/388 (77%) Query: 2 SLQDLKVKFIEKYGKSTEEVRVFYAPGRVNLIGEHLDYNGGYVFPAALDFGTTLIVRPRS 61 S++ L +FI+++G E++ F+APGRVNLIGEH DYNGGYVFPAAL FGTTL++R R Sbjct: 3 SIEQLTQQFIQQFGGEAAEIKAFHAPGRVNLIGEHTDYNGGYVFPAALTFGTTLLIRKRD 62 Query: 62 DGKVQFASTNFPYEASIDYSEIGKAKTGEWVDYPVGVMVELAKKDLPVSAGYDLLFHGEI 121 D ++ A+TNFP S+D +I + +W++YP G++ EL +K + S+GYDLLFHGEI Sbjct: 63 DRQLGLATTNFPSSKSLDIDKIAFDEADDWMNYPKGIVYELGQKGIQFSSGYDLLFHGEI 122 Query: 122 PNGSGLSSSASIEVVTGFAFLTLLGGDTDTVEIALLSQRAENQYVGVNSGIMDQFAVANG 181 PNG+GLSSSASIEVVT +A LT+ G TDTV+IALLSQ++EN++ GV GIMDQFAVANG Sbjct: 123 PNGAGLSSSASIEVVTAYALLTMEGKPTDTVQIALLSQKSENEFNGVQCGIMDQFAVANG 182 Query: 182 KRDQAILLMCDTLEYSLIPFVTGSYKLVISNTNKKRGLVDSKYNERRSQCEEALAILKQE 241 K+D AILLMCDTLEY L+PF +G+YKLVI NTNK+RGLVDS YNERRSQCE+A+ L+ Sbjct: 183 KKDHAILLMCDTLEYELVPFQSGAYKLVIGNTNKRRGLVDSAYNERRSQCEQAVVDLQAA 242 Query: 242 VPGLSYLAELKPEQFEAHKDKITDETVQRRARHVVEENQRVLDSVELLKQNDLKQFGLYM 301 P L L ++ EQF A+K I DE V+ RA+HVVEE RVL S++ LK NDL+ FG YM Sbjct: 243 FPELKLLGQINLEQFNANKHLIKDEVVRNRAQHVVEEIDRVLRSMDALKANDLEAFGQYM 302 Query: 302 NDSHVSLRDLYEVSCEELDVMVEEAQKIPGTLGSRMTGAGFGGCTVSLVHENDVERFIRE 361 N SH SLRDLYEV+ ELD MV A+++PG LGSRMTGAGFGGCTVSLVHE+ +ERF E Sbjct: 303 NGSHDSLRDLYEVTGSELDAMVAAARQVPGVLGSRMTGAGFGGCTVSLVHEDSIERFKEE 362 Query: 362 VGEAYRTRTGLIGEFYVCGIGNGVEELK 389 VG Y TGL +FYVC IGNGVE+L+ Sbjct: 363 VGRKYTEATGLTPDFYVCSIGNGVEQLQ 390 >B0K6A9.1 B0K6A9_THEPX Galactokinase Length = 387 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 203/376 (53%), Positives = 268/376 (71%), Gaps = 2/376 (0%) Query: 14 YGKSTEEVRVFYAPGRVNLIGEHLDYNGGYVFPAALDFGTTLIVRPRSDGKVQFASTNFP 73 YGK+ E+R+FY+PGRVNLIGEH DYNGGYVFP ALDFGT +R R+D KV AS NF Sbjct: 13 YGKNDAEIRLFYSPGRVNLIGEHTDYNGGYVFPCALDFGTYAAIRKRNDKKVFMASLNFD 72 Query: 74 YEASIDYSEIGKAKTGEWVDYPVGVMVELAKKDLPVSAGYDLLFHGEIPNGSGLSSSASI 133 + +D + K+ +W +YP GV+ L + S G++++F G IPNG+GLSSSASI Sbjct: 73 LKVEVDLDALNFDKSHDWANYPKGVLKVLQDEGYDFS-GFEIVFEGNIPNGAGLSSSASI 131 Query: 134 EVVTGFAFLTLLGGDTDTVEIALLSQRAENQYVGVNSGIMDQFAVANGKRDQAILLMCDT 193 E+VT A + + D +++ L Q+AEN +VGVN GIMDQFAV GK+D AILL DT Sbjct: 132 ELVTAVAVNEVFNLNIDRIKLVKLCQKAENTFVGVNCGIMDQFAVGMGKKDHAILLKSDT 191 Query: 194 LEYSLIPFVTGSYKLVISNTNKKRGLVDSKYNERRSQCEEALAILKQEVPGLSYLAELKP 253 LEYS +P YK++I+NTNK+RGL+DSKYNERRS+CE+AL+ L++ +P + L+E+ Sbjct: 192 LEYSYVPLKLEGYKILITNTNKRRGLLDSKYNERRSECEKALSYLQKALP-VKNLSEITI 250 Query: 254 EQFEAHKDKITDETVQRRARHVVEENQRVLDSVELLKQNDLKQFGLYMNDSHVSLRDLYE 313 EQFE +KD I DE +++RA+HV+ EN+RVLD+V+ L DL +FG M +SH SLRD YE Sbjct: 251 EQFEEYKDLIPDEVLRKRAKHVITENKRVLDAVKALNDKDLIKFGELMVESHNSLRDDYE 310 Query: 314 VSCEELDVMVEEAQKIPGTLGSRMTGAGFGGCTVSLVHENDVERFIREVGEAYRTRTGLI 373 V+ +ELD +VEEA K+ G +GSRMTGAGFGGCTVS+V E+ VE FI+ V Y + G Sbjct: 311 VTGKELDTLVEEALKLKGVIGSRMTGAGFGGCTVSIVKEDAVEEFIKVVTHNYTQKIGYR 370 Query: 374 GEFYVCGIGNGVEELK 389 Y+ GIG G E+K Sbjct: 371 PTVYITGIGEGAGEIK 386 >B0K7L8.1 B0K7L8_THEP3 Galactokinase Length = 387 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 203/376 (53%), Positives = 267/376 (71%), Gaps = 2/376 (0%) Query: 14 YGKSTEEVRVFYAPGRVNLIGEHLDYNGGYVFPAALDFGTTLIVRPRSDGKVQFASTNFP 73 YGK+ E+R+FY+PGRVNLIGEH DYNGGYVFP ALDFGT +R R+D KV AS NF Sbjct: 13 YGKNDAEIRLFYSPGRVNLIGEHTDYNGGYVFPCALDFGTYAAIRKRNDKKVFMASLNFD 72 Query: 74 YEASIDYSEIGKAKTGEWVDYPVGVMVELAKKDLPVSAGYDLLFHGEIPNGSGLSSSASI 133 + +D K+ +W +YP GV+ L + S G++++F G IPNG+GLSSSASI Sbjct: 73 LKVEVDLDAFIYDKSHDWANYPKGVLKVLQDEGYDFS-GFEIVFEGNIPNGAGLSSSASI 131 Query: 134 EVVTGFAFLTLLGGDTDTVEIALLSQRAENQYVGVNSGIMDQFAVANGKRDQAILLMCDT 193 E+VT A + + D +++ L Q+AEN +VGVN GIMDQFAV GK+D AILL DT Sbjct: 132 ELVTAVAVNEVFNLNIDRIKLVKLCQKAENTFVGVNCGIMDQFAVGMGKKDHAILLKSDT 191 Query: 194 LEYSLIPFVTGSYKLVISNTNKKRGLVDSKYNERRSQCEEALAILKQEVPGLSYLAELKP 253 LEYS +P YK++I+NTNK+RGL+DSKYNERRS+CE+AL+ L++ +P + L+E+ Sbjct: 192 LEYSYVPLKLEGYKILITNTNKRRGLLDSKYNERRSECEKALSYLQKALP-VKNLSEITI 250 Query: 254 EQFEAHKDKITDETVQRRARHVVEENQRVLDSVELLKQNDLKQFGLYMNDSHVSLRDLYE 313 EQFE +KD I DE +++RA+HV+ EN+RVLD+V+ L DL +FG M +SH SLRD YE Sbjct: 251 EQFEEYKDLIPDEVLRKRAKHVITENKRVLDAVKALNDKDLIKFGELMIESHNSLRDDYE 310 Query: 314 VSCEELDVMVEEAQKIPGTLGSRMTGAGFGGCTVSLVHENDVERFIREVGEAYRTRTGLI 373 V+ +ELD +VEEA K+ G +GSRMTGAGFGGCTVS+V E+ VE FI+ V Y + G Sbjct: 311 VTGKELDTLVEEALKLKGVIGSRMTGAGFGGCTVSIVKEDAVEEFIKVVTHNYTQKIGYR 370 Query: 374 GEFYVCGIGNGVEELK 389 Y+ GIG G E+K Sbjct: 371 PTVYITGIGEGAGEIK 386 >Q8R8R7.1 GAL1_THETN Galactokinase EC=2.7.1.6 Length = 390 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 206/383 (53%), Positives = 268/383 (69%), Gaps = 3/383 (0%) Query: 8 VKFIEK-YGKSTEEVRVFYAPGRVNLIGEHLDYNGGYVFPAALDFGTTLIVRPRSDGKVQ 66 V+ +EK YGKS E+R+FY+PGRVNLIGEH DYNGGYVFP ALDFGT +R R D KV Sbjct: 6 VEALEKFYGKSDREIRLFYSPGRVNLIGEHTDYNGGYVFPCALDFGTYAAIRKRDDKKVF 65 Query: 67 FASTNFPYEASIDYSEIGKAKTGEWVDYPVGVMVELAKKDLPVSAGYDLLFHGEIPNGSG 126 AS NF + +D I K +W +YP GV+ L ++ S G++++F G IP G+G Sbjct: 66 MASLNFDLKVEVDLDSIFYDKEHDWANYPKGVLKILQEEGYEFS-GFEIVFGGNIPVGAG 124 Query: 127 LSSSASIEVVTGFAFLTLLGGDTDTVEIALLSQRAENQYVGVNSGIMDQFAVANGKRDQA 186 LSSSASIE+VT A + + D + + L QRAEN +VGVN GIMDQFAV GK+ A Sbjct: 125 LSSSASIEMVTAVAVNEVFNLNIDRINLVKLCQRAENTFVGVNCGIMDQFAVGMGKKGHA 184 Query: 187 ILLMCDTLEYSLIPFVTGSYKLVISNTNKKRGLVDSKYNERRSQCEEALAILKQEVPGLS 246 ILL DTLEYS +P YK++I+NTNKKRGL+DSKYNERRS+CE+AL LK+ +P + Sbjct: 185 ILLKSDTLEYSYVPLNLEGYKILITNTNKKRGLLDSKYNERRSECEKALTYLKKALP-VK 243 Query: 247 YLAELKPEQFEAHKDKITDETVQRRARHVVEENQRVLDSVELLKQNDLKQFGLYMNDSHV 306 L+E+ E+FE +KD I DE +++RARHV+ EN+RVLD+V+ L ND+ +FG M +SH Sbjct: 244 NLSEVTVERFEEYKDLIPDEVLRKRARHVITENKRVLDAVKALNDNDIVKFGKLMIESHN 303 Query: 307 SLRDLYEVSCEELDVMVEEAQKIPGTLGSRMTGAGFGGCTVSLVHENDVERFIREVGEAY 366 SLR+ +EV+ +ELD +VEEA K+ G +GSRMTGAGFGGCTVS+V E+ VE FI V Y Sbjct: 304 SLRNDFEVTGKELDTLVEEALKLKGVVGSRMTGAGFGGCTVSIVKEDAVEEFIEVVTRNY 363 Query: 367 RTRTGLIGEFYVCGIGNGVEELK 389 + G YV G+G G E++ Sbjct: 364 TQKIGYAPTVYVTGVGEGAGEVE 386 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.136 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,351,653,106 Number of extensions: 101764979 Number of successful extensions: 290134 Number of sequences better than 1.0e-05: 992 Number of HSP's gapped: 287382 Number of HSP's successfully gapped: 1097 Length of query: 392 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 254 Effective length of database: 1,760,596,133 Effective search space: 447191417782 Effective search space used: 447191417782 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)