BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0168.0026.p (541 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDL0.1 B3KDL0_9BACI ABC transporter related 998 0.0 B1D5S0.1 B1D5S0_9BACL ABC transporter related 924 0.0 B8I1C3.1 B8I1C3_CLOCE ABC transporter related 856 0.0 C0ZCM4.1 C0ZCM4_BREBN Putative ABC transporter ATP-binding protein 855 0.0 B0TBH3.1 B0TBH3_HELMI Abc transporter 838 0.0 >B3KDL0.1 B3KDL0_9BACI ABC transporter related Length = 541 Score = 998 bits (2581), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/541 (89%), Positives = 516/541 (95%) Query: 1 MISTSGVTLRYGKRALFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEANTGEVHM 60 MISTSGVTLRYGKRALFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIE N GEVHM Sbjct: 1 MISTSGVTLRYGKRALFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPNQGEVHM 60 Query: 61 TPGERLAVLKQNHFEYDEYPVLETVIMGHTRLYDIMKEKDALYAKSDFSEADGLRAGELE 120 TP ER+AVLKQNH+EYD+YPVLETVIMGH RLY+IMKEKD LYAKSDFSE DG+RAGELE Sbjct: 61 TPNERMAVLKQNHYEYDQYPVLETVIMGHARLYNIMKEKDELYAKSDFSEEDGMRAGELE 120 Query: 121 GEFAELNGWDAEPDAAAMLIGLGIMREMHDKKMAELSGNEKVRVLLAQALFGRPNNLLLD 180 GEFAELNGWDAEPDAAA+LIGLGI RE+HDKKM+ELSGNEKVRVLLAQALFGRP+NLLLD Sbjct: 121 GEFAELNGWDAEPDAAALLIGLGIPRELHDKKMSELSGNEKVRVLLAQALFGRPHNLLLD 180 Query: 181 EPTNHLDLESIGWLENFLMDYEGTVIVVSHDRHFLNKVCTHIADIDFGKIQMYVGNYDFW 240 EPTNHLDLESI WLENFLMDYEGTVIVVSHDRHFLNKVCTHIADIDFGKIQ+YVGNYDFW Sbjct: 181 EPTNHLDLESIQWLENFLMDYEGTVIVVSHDRHFLNKVCTHIADIDFGKIQLYVGNYDFW 240 Query: 241 YESSQLAQALQRDANKKKEDKIKELQAFIQRFSANASKSKQATSRKKQLEKITLDDIRPS 300 YESS+LA LQRDANKKKE+KIKELQAFIQRFSANASKSKQATSRKKQL+KITL+D+RPS Sbjct: 241 YESSKLALELQRDANKKKEEKIKELQAFIQRFSANASKSKQATSRKKQLDKITLEDLRPS 300 Query: 301 NRKYPFLNFKPEREAGKQLLTISGLTKTVEGEKMLDEFSIVVNKGDKIAFVGPNSQPKSL 360 NRKYPFL+FKPEREAGKQLLTI G+TK+++GEK+LD S VVNKGDKIAFVGPN PK+ Sbjct: 301 NRKYPFLHFKPEREAGKQLLTIDGITKSMDGEKVLDNVSFVVNKGDKIAFVGPNGMPKTT 360 Query: 361 LFDIIMGEKEADAGEYTWGVTTTQAYFPKDNSSYFDGVNLNLVEWLRQYSKDQDETFLRG 420 LF II GE EADAGEY+WGVTTTQAYFPKDNS+YFDGV++NLVEWLRQYSKDQDETFLRG Sbjct: 361 LFQIITGETEADAGEYSWGVTTTQAYFPKDNSAYFDGVDINLVEWLRQYSKDQDETFLRG 420 Query: 421 FLGRMLFAGEEALKKASVLSGGEKVRCMLAKMMLNGANVLVFDEPTNHLDLESITALNNG 480 FLGRMLF+GEEALKKASVLSGGEKVRCMLAKMMLNGANVL+FDEPTNHLDLESITALNNG Sbjct: 421 FLGRMLFSGEEALKKASVLSGGEKVRCMLAKMMLNGANVLIFDEPTNHLDLESITALNNG 480 Query: 481 LIDFDGTILFTSHDHQFIQTIANRIIEITPAGVIDRTMTYDEYLENPEIKEMRARMYPVE 540 LIDFDGTILFTSHDHQFIQTIANRIIEITP G+IDR+M+YDEYLE+ EIK +R MYPVE Sbjct: 481 LIDFDGTILFTSHDHQFIQTIANRIIEITPNGIIDRSMSYDEYLESEEIKGLRESMYPVE 540 Query: 541 V 541 V Sbjct: 541 V 541 >B1D5S0.1 B1D5S0_9BACL ABC transporter related Length = 539 Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/539 (80%), Positives = 487/539 (90%) Query: 1 MISTSGVTLRYGKRALFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEANTGEVHM 60 MISTSG+TLR+GK+ LFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGE+E ++GEVH+ Sbjct: 1 MISTSGITLRFGKKPLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEVEQSSGEVHI 60 Query: 61 TPGERLAVLKQNHFEYDEYPVLETVIMGHTRLYDIMKEKDALYAKSDFSEADGLRAGELE 120 TPGERLAVLKQNHFEYDE+ VLETVIMGH +LYD+MKEKDALYAK+DF++ DG+RAGELE Sbjct: 61 TPGERLAVLKQNHFEYDEFNVLETVIMGHKKLYDVMKEKDALYAKADFTDEDGMRAGELE 120 Query: 121 GEFAELNGWDAEPDAAAMLIGLGIMREMHDKKMAELSGNEKVRVLLAQALFGRPNNLLLD 180 EFA++NGW+AE AA ML GLGI ++HDKKMAEL GNEKVRVLLAQALFG PN LLLD Sbjct: 121 AEFADMNGWEAESQAAEMLNGLGITPDLHDKKMAELGGNEKVRVLLAQALFGEPNILLLD 180 Query: 181 EPTNHLDLESIGWLENFLMDYEGTVIVVSHDRHFLNKVCTHIADIDFGKIQMYVGNYDFW 240 EPTNHLD+ESI WLE+FL YEGTV+VVSHDRHFLN VCTHIADIDFGKIQMYVGNYDFW Sbjct: 181 EPTNHLDIESIRWLEDFLSGYEGTVVVVSHDRHFLNTVCTHIADIDFGKIQMYVGNYDFW 240 Query: 241 YESSQLAQALQRDANKKKEDKIKELQAFIQRFSANASKSKQATSRKKQLEKITLDDIRPS 300 YESSQLA ALQR NKKKEDKIKELQAFIQRFSAN SKSKQATSRKK L+KITLDDIRPS Sbjct: 241 YESSQLALALQRGENKKKEDKIKELQAFIQRFSANKSKSKQATSRKKLLDKITLDDIRPS 300 Query: 301 NRKYPFLNFKPEREAGKQLLTISGLTKTVEGEKMLDEFSIVVNKGDKIAFVGPNSQPKSL 360 NRKYPF++FK EREAGK LL + GLTKT++GEK++D +I VNKGDKIAFVGPN PK++ Sbjct: 301 NRKYPFIHFKGEREAGKSLLLVEGLTKTIDGEKVIDNLTIAVNKGDKIAFVGPNGLPKTV 360 Query: 361 LFDIIMGEKEADAGEYTWGVTTTQAYFPKDNSSYFDGVNLNLVEWLRQYSKDQDETFLRG 420 LF ++MGE EADAG + WGVTTTQ YFPKDN+ YFDGV LNLVEWLRQYSKD DETF+RG Sbjct: 361 LFQLLMGELEADAGTFQWGVTTTQGYFPKDNAPYFDGVELNLVEWLRQYSKDPDETFIRG 420 Query: 421 FLGRMLFAGEEALKKASVLSGGEKVRCMLAKMMLNGANVLVFDEPTNHLDLESITALNNG 480 FLGRMLF+G++A+KKASVLSGGEKVRCML+K+ML+GANV V DEPTNHLDLESITALNNG Sbjct: 421 FLGRMLFSGDDAIKKASVLSGGEKVRCMLSKIMLSGANVFVLDEPTNHLDLESITALNNG 480 Query: 481 LIDFDGTILFTSHDHQFIQTIANRIIEITPAGVIDRTMTYDEYLENPEIKEMRARMYPV 539 L D D T+LFTSHDHQF+QTIANRI+EITP G+IDR M+YDEYLE+ EIK +R RMY V Sbjct: 481 LTDTDCTVLFTSHDHQFVQTIANRIMEITPNGLIDRMMSYDEYLESEEIKALRERMYAV 539 >B8I1C3.1 B8I1C3_CLOCE ABC transporter related Length = 538 Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/537 (74%), Positives = 470/537 (87%) Query: 1 MISTSGVTLRYGKRALFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEANTGEVHM 60 MIS +GV+LRYG RALFE+VNIKFT GNCYGLIGANG+GKSTFLKILSGEIE N G++ + Sbjct: 1 MISANGVSLRYGGRALFENVNIKFTQGNCYGLIGANGSGKSTFLKILSGEIEPNKGDISI 60 Query: 61 TPGERLAVLKQNHFEYDEYPVLETVIMGHTRLYDIMKEKDALYAKSDFSEADGLRAGELE 120 TPGER+AVLKQ+H+ YDEY VL+TVIMGH RL +IM EK+ LYAKSDF+EA+G+R ELE Sbjct: 61 TPGERMAVLKQDHYAYDEYEVLKTVIMGHKRLVEIMDEKEILYAKSDFTEAEGIRLSELE 120 Query: 121 GEFAELNGWDAEPDAAAMLIGLGIMREMHDKKMAELSGNEKVRVLLAQALFGRPNNLLLD 180 GEFAELNGW+AE DAA +L GL I E H K M +L GN+KVRVLLAQALFG P+ LLLD Sbjct: 121 GEFAELNGWEAESDAAMLLNGLNITEEYHHKLMKDLDGNQKVRVLLAQALFGNPDILLLD 180 Query: 181 EPTNHLDLESIGWLENFLMDYEGTVIVVSHDRHFLNKVCTHIADIDFGKIQMYVGNYDFW 240 EPTNHLD+ SI WLENFL ++E VIVVSHDRHFLN+VCTHIADIDFGKIQ+YVGNYDFW Sbjct: 181 EPTNHLDVASITWLENFLANFENIVIVVSHDRHFLNQVCTHIADIDFGKIQLYVGNYDFW 240 Query: 241 YESSQLAQALQRDANKKKEDKIKELQAFIQRFSANASKSKQATSRKKQLEKITLDDIRPS 300 Y+SSQLA +DANKK E +IKELQ FIQRFSANASKSKQATSRKK L+K+TL+DIRPS Sbjct: 241 YQSSQLALQQAKDANKKTEARIKELQEFIQRFSANASKSKQATSRKKLLDKLTLEDIRPS 300 Query: 301 NRKYPFLNFKPEREAGKQLLTISGLTKTVEGEKMLDEFSIVVNKGDKIAFVGPNSQPKSL 360 +RKYPF++FKPEREAG LL ++GL+K +EGEK+L++F+++VNKGDKIAFVG K+ Sbjct: 301 SRKYPFVDFKPEREAGNDLLMVNGLSKEIEGEKLLNDFNLIVNKGDKIAFVGTYGNAKTT 360 Query: 361 LFDIIMGEKEADAGEYTWGVTTTQAYFPKDNSSYFDGVNLNLVEWLRQYSKDQDETFLRG 420 LF ++MGE E D+GE+ WGVTT+QAYFP DNS +FDGV+LNLV+WLRQ+S DQ ETFLRG Sbjct: 361 LFKVLMGEMEPDSGEFKWGVTTSQAYFPTDNSKFFDGVDLNLVDWLRQFSNDQTETFLRG 420 Query: 421 FLGRMLFAGEEALKKASVLSGGEKVRCMLAKMMLNGANVLVFDEPTNHLDLESITALNNG 480 +LGRMLF+GEEALKKASVLSGGEKVRCML+KMML+GANVLV DEPTNHLDLESIT+LNNG Sbjct: 421 WLGRMLFSGEEALKKASVLSGGEKVRCMLSKMMLSGANVLVLDEPTNHLDLESITSLNNG 480 Query: 481 LIDFDGTILFTSHDHQFIQTIANRIIEITPAGVIDRTMTYDEYLENPEIKEMRARMY 537 LI++ GTILFTSHDH+F+QTIANRIIEITP G+IDR MTYDEYLEN +I +R M+ Sbjct: 481 LINYKGTILFTSHDHEFVQTIANRIIEITPKGIIDRQMTYDEYLENEDIAALRKEMW 537 >C0ZCM4.1 C0ZCM4_BREBN Putative ABC transporter ATP-binding protein Length = 537 Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/537 (76%), Positives = 471/537 (87%), Gaps = 1/537 (0%) Query: 1 MISTSGVTLRYGKRALFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEANTGEVHM 60 MIST VTLRYGKRALFEDV+IKFTPGNCYGLIGANGAGKSTF+KILSGEI+ +G V + Sbjct: 1 MISTQNVTLRYGKRALFEDVSIKFTPGNCYGLIGANGAGKSTFVKILSGEIDPTSGHVSV 60 Query: 61 TPGERLAVLKQNHFEYDEYPVLETVIMGHTRLYDIMKEKDALYAKSDFSEADGLRAGELE 120 TPGER+AVLKQNHFE+DEY VL+TVIMGH RL++IM+EK ALY K DFSE DG RA +LE Sbjct: 61 TPGERIAVLKQNHFEFDEYEVLKTVIMGHKRLFEIMEEKTALYMKEDFSEEDGNRASQLE 120 Query: 121 GEFAELNGWDAEPDAAAMLIGLGIMREMHDKKMAELSGNEKVRVLLAQALFGRPNNLLLD 180 GEF ELNGW AE DAA++LIGLGI ++HDK+M +L+ +EKVRVLLAQALFG P+ LLLD Sbjct: 121 GEFEELNGWMAEADAASLLIGLGIPTDLHDKQMKDLASSEKVRVLLAQALFGNPHILLLD 180 Query: 181 EPTNHLDLESIGWLENFLMDYEGTVIVVSHDRHFLNKVCTHIADIDFGKIQMYVGNYDFW 240 EPTNHLD+ESI WLENFL DYE TVIVVSHDRHFLNKVCTHIADIDFGKIQMYVGNYDFW Sbjct: 181 EPTNHLDIESIRWLENFLADYENTVIVVSHDRHFLNKVCTHIADIDFGKIQMYVGNYDFW 240 Query: 241 YESSQLAQALQRDANKKKEDKIKELQAFIQRFSANASKSKQATSRKKQLEKITLDDIRPS 300 YESSQLA + RD NKKKE+K+KELQ FI RFSANASKSKQATSRKK LEKITL+DIRPS Sbjct: 241 YESSQLALKMVRDQNKKKEEKMKELQEFIARFSANASKSKQATSRKKLLEKITLEDIRPS 300 Query: 301 NRKYPFLNFKPEREAGKQLLTISGLTKTVEGEKMLDEFSIVVNKGDKIAFVGPNSQPKSL 360 +RKYPF+NFKPEREAGK L+ I GL+KT+EGEK+ + + +NKGDK+AFVGPN K+ Sbjct: 301 SRKYPFINFKPEREAGKNLVAIEGLSKTIEGEKLFENLHLTINKGDKVAFVGPNELAKTT 360 Query: 361 LFDIIMGEKEADAGEYTWGVTTTQAYFPKDNSSYFDGVNLNLVEWLRQYSKDQDETFLRG 420 F I+MGE + D+G + WGVTT+QAYFPKDN+ YF+ +L+LV+WLRQYSKDQDETF+RG Sbjct: 361 FFQILMGEVQPDSGSFEWGVTTSQAYFPKDNAEYFNS-DLSLVDWLRQYSKDQDETFIRG 419 Query: 421 FLGRMLFAGEEALKKASVLSGGEKVRCMLAKMMLNGANVLVFDEPTNHLDLESITALNNG 480 FLGRMLF+G+EALKK++VLSGGEKVRCML+KMML ANVL+ DEPTNHLDLESITALNNG Sbjct: 420 FLGRMLFSGDEALKKSNVLSGGEKVRCMLSKMMLASANVLIMDEPTNHLDLESITALNNG 479 Query: 481 LIDFDGTILFTSHDHQFIQTIANRIIEITPAGVIDRTMTYDEYLENPEIKEMRARMY 537 LI+FDGT+LF SHDHQF+QTIANR+IE TP GVID+ MTYDEYLE+ EIK +R Y Sbjct: 480 LIEFDGTLLFVSHDHQFVQTIANRVIEFTPKGVIDKMMTYDEYLESDEIKRLRDEHY 536 >B0TBH3.1 B0TBH3_HELMI Abc transporter Length = 537 Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/535 (75%), Positives = 471/535 (88%), Gaps = 1/535 (0%) Query: 1 MISTSGVTLRYGKRALFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEANTGEVHM 60 MIST +TLR+GKR LFEDVNIKFTPGN YGLIGANGAGKSTFLKILSGEIE ++GEV + Sbjct: 1 MISTQNLTLRFGKRVLFEDVNIKFTPGNTYGLIGANGAGKSTFLKILSGEIEPSSGEVVV 60 Query: 61 TPGERLAVLKQNHFEYDEYPVLETVIMGHTRLYDIMKEKDALYAKSDFSEADGLRAGELE 120 TPGER+AVLKQNHFE+DEY V++TVIMGH RLY +M+EKDA+YAK+DF+E DG+RA ELE Sbjct: 61 TPGERIAVLKQNHFEFDEYDVIKTVIMGHARLYQVMEEKDAIYAKADFTEEDGMRAAELE 120 Query: 121 GEFAELNGWDAEPDAAAMLIGLGIMREMHDKKMAELSGNEKVRVLLAQALFGRPNNLLLD 180 GEFAELNGWDAE +AA +L GLG+ +H+++M EL N KVRVLLAQALFG P+ LLLD Sbjct: 121 GEFAELNGWDAESEAANLLTGLGVPNALHNRQMKELETNVKVRVLLAQALFGNPHILLLD 180 Query: 181 EPTNHLDLESIGWLENFLMDYEGTVIVVSHDRHFLNKVCTHIADIDFGKIQMYVGNYDFW 240 EPTNHLDL+SI WLENFL DY+G VIVVSHDRHFLN+VCTHIADIDFGKIQ+YVGNYDFW Sbjct: 181 EPTNHLDLDSISWLENFLADYKGIVIVVSHDRHFLNQVCTHIADIDFGKIQLYVGNYDFW 240 Query: 241 YESSQLAQALQRDANKKKEDKIKELQAFIQRFSANASKSKQATSRKKQLEKITLDDIRPS 300 YESSQLA + R+ANKKKE+KIKEL+ FI+RFSANASKSKQATSRKK L+KITLDDI+PS Sbjct: 241 YESSQLALQMARNANKKKEEKIKELEQFIRRFSANASKSKQATSRKKLLDKITLDDIKPS 300 Query: 301 NRKYPFLNFKPEREAGKQLLTISGLTKTVEGEKMLDEFSIVVNKGDKIAFVGPNSQPKSL 360 NRKYP++ FKP+REAG LLT+SGLTKT++GEK+L+ S VNKGDKIAFVG N K+ Sbjct: 301 NRKYPYIVFKPDREAGNDLLTVSGLTKTIDGEKVLNNVSFTVNKGDKIAFVGSNGLAKTT 360 Query: 361 LFDIIMGEKEADAGEYTWGVTTTQAYFPKDNSSYFDGVNLNLVEWLRQYSKDQDETFLRG 420 LF I+MGE EAD+GE+ WG+TT+QAYFPKDNS+YF +LNL++WLRQY+KDQDE F+RG Sbjct: 361 LFQILMGELEADSGEFKWGITTSQAYFPKDNSAYFTNGDLNLIDWLRQYAKDQDEGFVRG 420 Query: 421 FLGRMLFAGEEALKKASVLSGGEKVRCMLAKMMLNGANVLVFDEPTNHLDLESITALNNG 480 FLGRMLF+G+E LKK SVLSGGEKVRCML++MML+GANVL+ DEPTNHLDLESITALNNG Sbjct: 421 FLGRMLFSGDETLKKVSVLSGGEKVRCMLSRMMLSGANVLIMDEPTNHLDLESITALNNG 480 Query: 481 LIDFDGTILFTSHDHQFIQTIANRIIEITPAGVIDRTMTYDEYLE-NPEIKEMRA 534 LI FDGT+LF S DHQF QTIANRIIE+TP G+ID+ MT+DEYLE +KE++ Sbjct: 481 LISFDGTLLFVSQDHQFTQTIANRIIELTPDGLIDKLMTFDEYLEYQASLKEVQG 535 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,199,866,626 Number of extensions: 136683518 Number of successful extensions: 834289 Number of sequences better than 1.0e-05: 23059 Number of HSP's gapped: 820716 Number of HSP's successfully gapped: 30666 Length of query: 541 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 400 Effective length of database: 1,732,333,088 Effective search space: 692933235200 Effective search space used: 692933235200 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)