BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0168.0023.p (360 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K527.1 B3K527_9BACI NLP/P60 protein 231 1e-58 C0ZDC2.1 C0ZDC2_BREBN Putative uncharacterized protein 101 1e-19 C0ZCP7.1 C0ZCP7_BREBN Putative gamma-DL-glutamyl hydrolase EC=3.... 93 3e-17 C0ZHY3.1 C0ZHY3_BREBN Putative uncharacterized protein 92 9e-17 B3K6N7.1 B3K6N7_9BACI NLP/P60 protein 82 9e-14 >B3K527.1 B3K527_9BACI NLP/P60 protein Length = 268 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 123/265 (46%), Positives = 165/265 (62%), Gaps = 23/265 (8%) Query: 95 GDVGYTSRGEQYISVAAAPAAQTGVIQATVRLREAPSTSGQVIGYLYTGDRVTIVEETNS 154 G GY S E +S A+ + GV + V +R PSTSG+V+ ++ G+RV I+ +++S Sbjct: 27 GSYGYGSVNE--VSAASVQSVTKGVASSNVYMRNKPSTSGKVVDRVHKGERVQILGKSSS 84 Query: 155 YWYKVRTANGNVGYTSSSDQYIAADGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 214 WYK++T++G GY SS +YI Sbjct: 85 -WYKIKTSDGKQGYASS--KYI------------------NQSSGSSNTSGNSGSTAPSA 123 Query: 215 ANVIESVIAAGMGYLGTPYEFGSSRSDTSTFDCSDFIRQIFMDAANLKLPADSRQQGDWI 274 + +E VI+AGM YLGTPYEFGS+R+ TSTFDCS F+R+ FMD AN+ LP+DSR+QG ++ Sbjct: 124 SASVEKVISAGMKYLGTPYEFGSNRNSTSTFDCSAFVRRAFMDGANITLPSDSRKQGQYV 183 Query: 275 KQNSTVVTDISGLKRGDLMFFMDYKGSSDSAYAGIDKSTARITHVAMYLGDGQLLQTYSV 334 K T V +++ LKRGDL+FFM Y+GSS SAYAG+DKS RITHVA+YLGD +LL TYS Sbjct: 184 KDKGTAVYNVNQLKRGDLVFFMSYRGSSASAYAGLDKSKQRITHVAIYLGDNKLLHTYSK 243 Query: 335 ASGGVRVDKLSASWMKRFLYGGSVI 359 SGGV V SW RF++GGSV+ Sbjct: 244 QSGGVLVGNFGDSWKHRFMHGGSVL 268 >C0ZDC2.1 C0ZDC2_BREBN Putative uncharacterized protein Length = 227 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 18/145 (12%) Query: 215 ANVIESVIAAGMGYLGTPYEFGSSRSDTSTFDCSDFIRQIFMDAANLKLPADSRQQGDWI 274 +++ + VI+ GM Y G PY+FGSS+ T TFDCS F +++F + + LP DSRQQ Sbjct: 101 SDIADQVISEGMKYKGVPYKFGSSKKTTRTFDCSSFTQRVFKEVG-VSLPRDSRQQS--- 156 Query: 275 KQNSTVVTDISGLKRGDLMFFMDYKGSSDSAYAGIDKSTARITHVAMYLGDGQLLQTYSV 334 K V D L++GDL+FF Y SS +RITHVA+Y GD +LL TY Sbjct: 157 KVGQKVSKD--QLQKGDLVFFHSYGSSS-----------SRITHVAIYAGDNKLLHTYG- 202 Query: 335 ASGGVRVDKLSASWMKRFLYGGSVI 359 G + SW KRF G VI Sbjct: 203 KPGVTTTNFKGTSWEKRFEVGRRVI 227 >C0ZCP7.1 C0ZCP7_BREBN Putative gamma-DL-glutamyl hydrolase EC=3.4.19.- Length = 293 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 19/138 (13%) Query: 215 ANVIESVIAAGMGYLGTPYEFGSSRSDTSTFDCSDFIRQIFMDAANLKLPADSRQQGDWI 274 + V + VI G Y+GT Y++GSS S T TFDCS F +++F +A + LP DSRQQ Sbjct: 166 STVADQVIKNGEKYMGTNYKYGSSSSTTKTFDCSSFTQRVFKEAG-ITLPRDSRQQSTVG 224 Query: 275 KQNSTVVTDISGLKRGDLMFFMDYKGSSDSAYAGIDKSTARITHVAMYLGDGQLLQTYSV 334 K S S L++GDL+F A ++ ++ RITHVA+Y GDG++L TY Sbjct: 225 KSVSK-----SNLQKGDLIFMK----------ASVNSTSDRITHVAIYAGDGKILHTY-- 267 Query: 335 ASGGVRVDKLSAS-WMKR 351 S GV K + W KR Sbjct: 268 GSPGVTYSKYDGTNWEKR 285 >C0ZHY3.1 C0ZHY3_BREBN Putative uncharacterized protein Length = 166 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 18/142 (12%) Query: 219 ESVIAAGMGYLGTPYEFGSSRSDTSTFDCSDFIRQIFMDAANLKLPADSRQQGDWIKQNS 278 + VIA G Y+GTPY+FG+S + T+ FDCS F +++F A LP SR Q K + Sbjct: 42 DKVIATGRKYMGTPYKFGASSNTTAVFDCSSFTKRVFKVAVGKSLPRTSRDQA---KVGT 98 Query: 279 TVVTDISGLKRGDLMFFMDYKGSSDSAYAGIDKSTARITHVAMYLGDGQLLQTYSVASGG 338 +V S LK+GDL+FF K ++ RITHVA+Y G+ +LL TY G Sbjct: 99 SV--SKSNLKKGDLVFFKASKTTTSK----------RITHVAIYAGNNKLLHTY--GKPG 144 Query: 339 VRVDKLS-ASWMKRFLYGGSVI 359 V SW KRF+ V+ Sbjct: 145 VTYSTFKGTSWEKRFVSARRVL 166 >B3K6N7.1 B3K6N7_9BACI NLP/P60 protein Length = 164 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 18/139 (12%) Query: 221 VIAAGMGYLGTPYEFGSSRSDTSTFDCSDFIRQIFMDAANLKLPADSRQQGDWIKQNSTV 280 V+ G Y+GTPY+FG+S S T FDCS F++ IF + LP S Q K S Sbjct: 44 VVNFGKQYMGTPYKFGASTSTTRVFDCSSFMKHIFKKYG-VNLPRTSAAQSKVGKAVSK- 101 Query: 281 VTDISGLKRGDLMFFMDYKGSSDSAYAGIDKSTARITHVAMYLGDGQLLQTYSVASGGVR 340 S L+ GDL+FF SS S G + +THVA+Y+G+ ++L TY GV Sbjct: 102 ----SNLRAGDLVFF-----SSGSRANGRN-----VTHVAVYMGNNKILHTY--GKPGVT 145 Query: 341 VDKLSASWMKRFLYGGSVI 359 + LS +W K +L V+ Sbjct: 146 ISSLSGNWSKTYLKARRVL 164 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.131 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,714,945,256 Number of extensions: 63246828 Number of successful extensions: 179745 Number of sequences better than 1.0e-05: 333 Number of HSP's gapped: 180800 Number of HSP's successfully gapped: 385 Length of query: 360 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 223 Effective length of database: 1,770,017,148 Effective search space: 394713824004 Effective search space used: 394713824004 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)