BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0168.0015.p (289 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDJ7.1 B3KDJ7_9BACI MCP methyltransferase CheR-type 486 e-136 Q8YVX1.1 Q8YVX1_ANASP All1848 protein 345 3e-93 Q3M3Q8.1 Q3M3Q8_ANAVT MCP methyltransferase, CheR-type 343 8e-93 B2J1T5.1 B2J1T5_NOSP7 MCP methyltransferase, CheR-type EC=2.1.1.80 334 6e-90 A4J3Z9.1 A4J3Z9_DESRM MCP methyltransferase, CheR-type 324 6e-87 >B3KDJ7.1 B3KDJ7_9BACI MCP methyltransferase CheR-type Length = 284 Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust. Identities = 221/258 (85%), Positives = 246/258 (95%) Query: 32 GVHRFYGYDFRNYALPSLKRRIWHHVHAENVPTISALQEKVLHDRACFERFVYSLSIPVT 91 G+HRFYGYDFRNYA+PSL+RRIWHHVHAE V TISALQ+KVLHDR+CFER +Y+LSIPVT Sbjct: 27 GIHRFYGYDFRNYAIPSLRRRIWHHVHAEGVSTISALQDKVLHDRSCFERLIYNLSIPVT 86 Query: 92 EMFRDPGLFLTFRQKVIPLLRTYPYIRIWHAGCSTGEEVYSMAILLHEEGLYDKARIYAT 151 EMFRDP LFLTFRQ V+PLLRTYPYIRIWHAGCSTGEEVYSMAILLHEEGLY+K+RIYAT Sbjct: 87 EMFRDPKLFLTFRQSVVPLLRTYPYIRIWHAGCSTGEEVYSMAILLHEEGLYEKSRIYAT 146 Query: 152 DMNARSLQQAKEGVYEISKMRQYTKNYMEAGGTRAFSEYYTAKYNSVILQPYLRKNIIFA 211 DMN+RSLQQAKEGV++I +M+QYTKNY+EAGGTR+FSEYYTAKYNSVI QP+L+KN+IFA Sbjct: 147 DMNSRSLQQAKEGVFDIKRMKQYTKNYLEAGGTRSFSEYYTAKYNSVIFQPFLKKNMIFA 206 Query: 212 EHNLATDTSFNEFNVIFCRNVMIYFNDELRDHVHGLFHESLSRFGVLVLGSKESIHFTRY 271 EHNLATD SFNEFNVIFCRNVMIYFND+LRDHVHGLFHESLS FG+LVLG+KESIHFT Y Sbjct: 207 EHNLATDRSFNEFNVIFCRNVMIYFNDQLRDHVHGLFHESLSHFGILVLGAKESIHFTNY 266 Query: 272 SDSYEPLDRVEKIYRKNK 289 S++YE LDRVEKIYRK K Sbjct: 267 SEAYETLDRVEKIYRKIK 284 >Q8YVX1.1 Q8YVX1_ANASP All1848 protein Length = 276 Score = 345 bits (884), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 158/256 (61%), Positives = 201/256 (78%) Query: 32 GVHRFYGYDFRNYALPSLKRRIWHHVHAENVPTISALQEKVLHDRACFERFVYSLSIPVT 91 GV+++YG+DFRNYA+ SLKRRI+ + E V ISALQE++LHDR C ERF+ SL++ VT Sbjct: 19 GVYQYYGHDFRNYAVSSLKRRIYSFMRLEGVDNISALQEQLLHDRTCLERFLLSLTVNVT 78 Query: 92 EMFRDPGLFLTFRQKVIPLLRTYPYIRIWHAGCSTGEEVYSMAILLHEEGLYDKARIYAT 151 MFRDP +L FR +V+P+LRTYP+IRIWHAGCS+GEEVYSMAILL EE LY + RIYAT Sbjct: 79 SMFRDPSFYLAFRNQVVPILRTYPFIRIWHAGCSSGEEVYSMAILLQEENLYHRCRIYAT 138 Query: 152 DMNARSLQQAKEGVYEISKMRQYTKNYMEAGGTRAFSEYYTAKYNSVILQPYLRKNIIFA 211 D N + LQ AK G++ + M++YT+ Y++AGG ++FSEYYTA Y+ I + LR+NIIFA Sbjct: 139 DTNEKVLQNAKSGIFPLKMMQEYTQLYLKAGGKQSFSEYYTAAYDHAIFRASLRENIIFA 198 Query: 212 EHNLATDTSFNEFNVIFCRNVMIYFNDELRDHVHGLFHESLSRFGVLVLGSKESIHFTRY 271 +HNLATD+SFNEFNVIFCRNV+IYFN L+ VH LFH SL FG+L LG +ESI FT Y Sbjct: 199 QHNLATDSSFNEFNVIFCRNVLIYFNQILQKRVHTLFHNSLCSFGILGLGKQESIRFTPY 258 Query: 272 SDSYEPLDRVEKIYRK 287 YE + + EK+YR+ Sbjct: 259 EQYYEEIAKGEKLYRR 274 >Q3M3Q8.1 Q3M3Q8_ANAVT MCP methyltransferase, CheR-type Length = 276 Score = 343 bits (881), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 158/256 (61%), Positives = 201/256 (78%) Query: 32 GVHRFYGYDFRNYALPSLKRRIWHHVHAENVPTISALQEKVLHDRACFERFVYSLSIPVT 91 GV+++YG+DFRNYA+ SLKRRI + E V ISALQ+++LHDRAC ERF+ SL++ VT Sbjct: 19 GVYQYYGHDFRNYAVSSLKRRIHSFMRLEGVDNISALQQQLLHDRACLERFLLSLTVNVT 78 Query: 92 EMFRDPGLFLTFRQKVIPLLRTYPYIRIWHAGCSTGEEVYSMAILLHEEGLYDKARIYAT 151 MFRDP +L FR +V+P+LRTYP+IRIWHAGCS+GEEVYSMAILL EE LY + RIYAT Sbjct: 79 SMFRDPSFYLAFRNQVVPILRTYPFIRIWHAGCSSGEEVYSMAILLQEENLYHRCRIYAT 138 Query: 152 DMNARSLQQAKEGVYEISKMRQYTKNYMEAGGTRAFSEYYTAKYNSVILQPYLRKNIIFA 211 D N + LQ AK G++ + M++YT+ Y++AGG R+FSEYYTA Y+ I + LR+NIIFA Sbjct: 139 DTNEKVLQNAKSGIFSLKMMQEYTQLYLKAGGKRSFSEYYTAAYDHAIFRASLRENIIFA 198 Query: 212 EHNLATDTSFNEFNVIFCRNVMIYFNDELRDHVHGLFHESLSRFGVLVLGSKESIHFTRY 271 +HNLATD+SFNEFNVIFCRNV+IYFN L+ VH LF+ SL FG+L LG +ESI FT Y Sbjct: 199 QHNLATDSSFNEFNVIFCRNVLIYFNQILQKRVHTLFYNSLCSFGILGLGKQESIRFTPY 258 Query: 272 SDSYEPLDRVEKIYRK 287 YE + + EK+YR+ Sbjct: 259 EQYYEEIAKGEKLYRR 274 >B2J1T5.1 B2J1T5_NOSP7 MCP methyltransferase, CheR-type EC=2.1.1.80 Length = 283 Score = 334 bits (856), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 152/256 (59%), Positives = 199/256 (77%) Query: 32 GVHRFYGYDFRNYALPSLKRRIWHHVHAENVPTISALQEKVLHDRACFERFVYSLSIPVT 91 GV+++YGYDFR+YAL SLKRRI + E + ISALQE++LH+RA ERF+ +L++ VT Sbjct: 24 GVYQYYGYDFRDYALSSLKRRIQSFMQLEGLANISALQERLLHNRAYLERFLLALTVNVT 83 Query: 92 EMFRDPGLFLTFRQKVIPLLRTYPYIRIWHAGCSTGEEVYSMAILLHEEGLYDKARIYAT 151 MFRDP + TFR +V+P L+TYP+IRIWHAGCSTGEEVYSMAILL EEGLY + RIYAT Sbjct: 84 SMFRDPSFYNTFRNQVVPFLQTYPFIRIWHAGCSTGEEVYSMAILLQEEGLYHRCRIYAT 143 Query: 152 DMNARSLQQAKEGVYEISKMRQYTKNYMEAGGTRAFSEYYTAKYNSVILQPYLRKNIIFA 211 D N + LQ A+ G++ + M++YT Y++AGG ++FSEYYTA Y++ I + LR+N++FA Sbjct: 144 DTNEKVLQNARSGIFSLKLMQEYTHLYLKAGGKKSFSEYYTAAYDNAIFRSSLRENVVFA 203 Query: 212 EHNLATDTSFNEFNVIFCRNVMIYFNDELRDHVHGLFHESLSRFGVLVLGSKESIHFTRY 271 +HNLATD+SFNEFNVI CRNV+IYFN L+ VH LF+ SL FG+L LG +ESI FT Y Sbjct: 204 QHNLATDSSFNEFNVIICRNVLIYFNQALQKRVHQLFYNSLCTFGILGLGKQESIRFTSY 263 Query: 272 SDSYEPLDRVEKIYRK 287 YE + + EK+Y+K Sbjct: 264 EQHYEEIVKGEKLYKK 279 >A4J3Z9.1 A4J3Z9_DESRM MCP methyltransferase, CheR-type Length = 269 Score = 324 bits (830), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 147/257 (57%), Positives = 195/257 (75%) Query: 31 SGVHRFYGYDFRNYALPSLKRRIWHHVHAENVPTISALQEKVLHDRACFERFVYSLSIPV 90 G+ + YGYDFR+Y S++RRIWH V AE + TISALQE+V H C +R + SI V Sbjct: 11 QGIFQLYGYDFRDYVFSSIRRRIWHRVQAERLTTISALQERVFHQPDCMQRLLLDFSIQV 70 Query: 91 TEMFRDPGLFLTFRQKVIPLLRTYPYIRIWHAGCSTGEEVYSMAILLHEEGLYDKARIYA 150 TEMFRDP F FR++V+P LR YP+IRIWHAGCS+GEEVYSM ILL+EEGL DK+ +YA Sbjct: 71 TEMFRDPDFFKVFRERVVPCLREYPFIRIWHAGCSSGEEVYSMVILLYEEGLSDKSILYA 130 Query: 151 TDMNARSLQQAKEGVYEISKMRQYTKNYMEAGGTRAFSEYYTAKYNSVILQPYLRKNIIF 210 TD+N +L+ A+ G + + KM+ YT NY+ AGG + FS+YYTAK + V+ + +L+KNI+F Sbjct: 131 TDINEVALKTARAGAFPLEKMKTYTGNYLRAGGCQDFSQYYTAKDDYVVFRNFLKKNIVF 190 Query: 211 AEHNLATDTSFNEFNVIFCRNVMIYFNDELRDHVHGLFHESLSRFGVLVLGSKESIHFTR 270 A+HNL TD+SFNEF+VI CRNVMIYFN +L++ VHGLF +SL+ G LVLG KE I FT Sbjct: 191 AQHNLVTDSSFNEFDVIICRNVMIYFNKKLQNRVHGLFCQSLNYSGYLVLGKKEDIKFTA 250 Query: 271 YSDSYEPLDRVEKIYRK 287 +++ Y+ L ++IY+K Sbjct: 251 HAEHYKELYAEQRIYQK 267 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.324 0.137 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,618,053,102 Number of extensions: 63183679 Number of successful extensions: 163484 Number of sequences better than 1.0e-05: 1669 Number of HSP's gapped: 160483 Number of HSP's successfully gapped: 1669 Length of query: 289 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 155 Effective length of database: 1,798,280,193 Effective search space: 278733429915 Effective search space used: 278733429915 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 130 (54.7 bits)