BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0168.0010.p
         (110 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KDJ1.1 B3KDJ1_9BACI Putative uncharacterized protein                120   4e-26
C0ZGE8.1 C0ZGE8_BREBN Putative uncharacterized protein                 72   1e-11
A8VVC2.1 A8VVC2_9BACI Putative uncharacterized protein                 62   2e-08
B1DKM0.1 B1DKM0_9BACL Putative uncharacterized protein                 58   3e-07

>B3KDJ1.1 B3KDJ1_9BACI Putative uncharacterized protein
          Length = 115

 Score =  120 bits (301), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 56/98 (57%), Positives = 74/98 (75%)

Query: 12  EVEEHPFELRHEVKRLNARLDKIADSLEKSEFKDILENYTNPKKRIITNLMAGISRGLGL 71
           EV+EHPFELRHEVK+LN RLDKIA +LEKSE KD+++NY NPKKRII NL AG++RGLGL
Sbjct: 16  EVQEHPFELRHEVKKLNTRLDKIAATLEKSEMKDMIDNYMNPKKRIIANLTAGLARGLGL 75

Query: 72  SLGTFVXXXXXXXXXXXXXNVPVIGEYLGEIKKYIDAN 109
           +LGT +             NVP+IG+++  ++ YI+ +
Sbjct: 76  TLGTALVLGLLGYILSFFVNVPMIGDFISNLQGYIEQS 113


>C0ZGE8.1 C0ZGE8_BREBN Putative uncharacterized protein
          Length = 103

 Score = 72.4 bits (176), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 55/87 (63%)

Query: 22  HEVKRLNARLDKIADSLEKSEFKDILENYTNPKKRIITNLMAGISRGLGLSLGTFVXXXX 81
            EV+++N R+ KIA  LE     D+++NYT P+K +  N +AG++RGLGL++GT +    
Sbjct: 12  QEVRKVNERMHKIAMFLEDIRLADVIQNYTAPRKLLWINFLAGLARGLGLTIGTAIVLAF 71

Query: 82  XXXXXXXXXNVPVIGEYLGEIKKYIDA 108
                    ++P++G+Y+ ++ +Y++ 
Sbjct: 72  LGSLLTQFLSIPILGDYIRQLVEYVET 98


>A8VVC2.1 A8VVC2_9BACI Putative uncharacterized protein
          Length = 115

 Score = 61.6 bits (148), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)

Query: 19  ELRHEV-KRLNARLDKIADSLEKSEFKDILENYTNPKKRIITNLMAGISRGLGLSLGTFV 77
           E RHE  +R  A LDK+ D   K   KD+  ++T+ K+ I TNL+AG++RG+GL++GT +
Sbjct: 20  EKRHEENERFEALLDKLEDMTTKGRLKDMAYHFTDKKEVIKTNLIAGVARGVGLTVGTAI 79

Query: 78  XXXXXXXXXXXXXNVPVIGEY----LGEIKKYIDA 108
                        ++P+IGE+    L E+++Y D 
Sbjct: 80  FLVILFFILSNMVDLPLIGEWIANLLNEVEQYQDT 114


>B1DKM0.1 B1DKM0_9BACL Putative uncharacterized protein
          Length = 120

 Score = 57.8 bits (138), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 20  LRHEVKRLNARLDKIADSLEKSEFKDILENYTNPKKRIITNLMAGISRGLGLSLG--TFV 77
           + H + RL+ RL KIA  +E+++  D ++   +P + +  NL+ G+SRG+G+++G   F 
Sbjct: 23  MEHTLSRLDMRLSKIATDMERTQIADYVDLLNHPLRLMWRNLLGGLSRGVGIAIGFTFFA 82

Query: 78  XXXXXXXXXXXXXNVPVIGEYLGEIKKYI 106
                        N+P+IG+Y+ +I + +
Sbjct: 83  ATILYVLRIIGALNLPIIGDYIADIVRVV 111


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.314    0.136    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 568,094,205
Number of extensions: 18100510
Number of successful extensions: 53180
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 53190
Number of HSP's successfully gapped: 5
Length of query: 110
Length of database: 3,060,696,203
Length adjustment: 77
Effective length of query: 33
Effective length of database: 2,335,278,048
Effective search space: 77064175584
Effective search space used: 77064175584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 126 (53.1 bits)