BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0168.0007.p (449 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KA85.1 B3KA85_9BACI Extracellular solute-binding protein family 1 386 e-105 B1DAP7.1 B1DAP7_9BACL Extracellular solute-binding protein family 1 385 e-105 C5D6S6.1 C5D6S6_9BACI Extracellular solute-binding protein family 1 384 e-105 B0K7T3.1 B0K7T3_THEP3 Extracellular solute-binding protein, fami... 365 6e-99 C3J2S5.1 C3J2S5_9BACI Extracellular solute-binding protein family 1 241 9e-62 >B3KA85.1 B3KA85_9BACI Extracellular solute-binding protein family 1 Length = 436 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 200/433 (46%), Positives = 281/433 (64%), Gaps = 9/433 (2%) Query: 21 VSKIVVLC--MLLVMTATACSSNSPNTAPSPKGGNNQTAETSAPENTADPEMEPEQGAKL 78 + K++ L L + TAC N+ A ET A ENT E++PE+GAKL Sbjct: 3 MKKLLTLAATFTLAFSITACGGNTAAPATEAPAETPPAQETPA-ENTETQELKPEEGAKL 61 Query: 79 MVWEAKEQLEYMKGVAADFEKKYGVPVNVEELAGGDQGGRLATDGPAKLAADVLTLPHDQ 138 +VWE++++ Y VA +F +KYGV V +EEL+ DQ +LA DGP+ LAADV+ PHD Sbjct: 62 VVWESRDERAYTDAVAKEFTEKYGVEVTIEELSPTDQVTKLAQDGPSGLAADVVLFPHDN 121 Query: 139 ISQAVKAGLLLPNDVFEEETKASMVETAVQASSYDGVLYGYPKSVETYALFYNKDLVPEA 198 + +AV L+LPND +EE+TK++ E A+Q SYDGVLYGYP++ ETY ++YNKDLV E Sbjct: 122 LGKAVATNLVLPNDFYEEKTKSNNTEAAIQGVSYDGVLYGYPRAAETYLMYYNKDLVKEV 181 Query: 199 PKTWNDIIAFANTYNKPKENKFAIMWEFVG-YYTYPFIGSFGGYIFGDSNSNPKDIGLNN 257 P T ++I F+ T+ +NK+ M+E Y+ YPF+ S GGYIFG+ ++ DIGLNN Sbjct: 182 PTTMEEVIEFSKTFTDKSKNKYGFMFETGNLYFAYPFLASNGGYIFGNGGADVNDIGLNN 241 Query: 258 EGTIKGFTFLQSLKKILPLNAGDITFDVKTQLFQEGKLAMNIDGPWSTGSFKDHV--NFG 315 EG +K SLK+ILP+ +GDIT D+K LF G LAM+I+GPW G +K+ + G Sbjct: 242 EGAVKSMEVYASLKEILPVKSGDITPDIKRGLFTAGDLAMDINGPWELGGYKEALGDKLG 301 Query: 316 VVPLPKGPNGEEMISFSGVKSYYVNSYTAYPVAARLFAHFASSKDNQLKNYKMTGAIPAS 375 V P+P G+ +SFSG+K++YV+S+T YP AARLFA FA+SK+ QL+ + G++P + Sbjct: 302 VAPIPT-IGGQPAVSFSGIKAWYVSSFTKYPQAARLFADFATSKEAQLQLSALVGSVPTN 360 Query: 376 IEAGESQEIKNDPITLGFFEQFQHSVPMPAISEINAVWEPLKAAFVSLWNDPGLDVKQTM 435 EA E +IKND F EQF+ S PMP++ E+ VW P+ AA +W D DVK+T+ Sbjct: 361 NEAQEDDQIKNDEYVSAFTEQFKSSQPMPSVPEMANVWSPVGAALAEIW-DNNKDVKETL 419 Query: 436 DQTVKTIQSDLES 448 D+ V ++ DL S Sbjct: 420 DKAVTQVK-DLNS 431 >B1DAP7.1 B1DAP7_9BACL Extracellular solute-binding protein family 1 Length = 441 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 191/383 (49%), Positives = 265/383 (69%), Gaps = 4/383 (1%) Query: 63 ENTADPEMEPEQGAKLMVWEAKEQLEYMKGVAADFEKKYGVPVNVEELAGGDQGGRLATD 122 E+ AD + PE+GA L VW++K + +++ +A +F +Y +PV +EE+ DQ +L TD Sbjct: 53 EDPADEAIVPEEGATLTVWDSKNERSFVEEMAKEFTAQYNIPVKIEEVESPDQVKKLTTD 112 Query: 123 GPAKLAADVLTLPHDQISQAVKAGLLLPNDVFEEETKASMVETAVQASSYDGVLYGYPKS 182 GPA + AD++T PHD + QAV AGL+LPND FEE+TK + E AV A + DG+LYGYP+S Sbjct: 113 GPAGIGADIVTFPHDNLGQAVAAGLILPNDFFEEDTKTANAEAAVNAVTSDGILYGYPRS 172 Query: 183 VETYALFYNKDLVPEAPKTWNDIIAFANTYNKPKENKFAIMWEFVG-YYTYPFIGSFGGY 241 VETYALFYNKDLV P +++DI+ F+ T+N P +NK+A+MWE Y+ Y F S GGY Sbjct: 173 VETYALFYNKDLVQTPPASFDDIVTFSKTFNDPAKNKYALMWEMGNFYFNYIFFASTGGY 232 Query: 242 IFGDSNSNPKDIGLNNEGTIKGFTFLQSLKKILPLNAGDITFDVKTQLFQEGKLAMNIDG 301 +FG++ +N DIGLNN+G ++G + QSLK+ILP+ +GD + D+ F + LAM I G Sbjct: 233 VFGENGTNAADIGLNNDGAVEGLKYFQSLKQILPIKSGDASADIIQGKFADKSLAMTITG 292 Query: 302 PWSTGSFKD-HVNFGVVPLPKGPNGEEMISFSGVKSYYVNSYTAYPVAARLFAHFASSKD 360 PW G FK+ +NFGV P+P NG+ +SFSGVK++YVNS+T YP A+RLFA+F SSK Sbjct: 293 PWKVGDFKNLGINFGVAPIPT-INGKPAVSFSGVKAWYVNSFTKYPNASRLFANFISSKA 351 Query: 361 NQLKNYKMTGAIPASIEAGESQEIKNDPITLGFFEQFQHSVPMPAISEINAVWEPLKAAF 420 QLK+Y +TGAIPA+ EA E K D I+ GF QF +S MP+I E+ +VW+P+ AA Sbjct: 352 GQLKDYSLTGAIPANKEAMEDPTFKADEISSGFAAQFVNSQAMPSIPEMGSVWDPIGAAL 411 Query: 421 VSLWNDPGLDVKQTMDQTVKTIQ 443 +WN+ D K +D V +Q Sbjct: 412 ADIWNE-NKDPKAALDNAVTQVQ 433 >C5D6S6.1 C5D6S6_9BACI Extracellular solute-binding protein family 1 Length = 432 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 202/439 (46%), Positives = 285/439 (64%), Gaps = 14/439 (3%) Query: 15 RSKMNAVSKIVVLCMLLVMTATACSSNSPNTAPSPKGGNNQTAETSAPENTADPEMEPEQ 74 + K +S + V+ ++ + A AC S + + G N+ A T+ ++ E++PE+ Sbjct: 2 KKKRRGISILAVMVLVFSLLA-ACGPTSSHKSV----GKNEPASTNEGDSK---EIKPEK 53 Query: 75 GAKLMVWEAKEQL-EYMKGVAADFEKKYGVPVNVEELAGGDQGGRLATDGPAKLAADVLT 133 GAKL VWE+ + E+ K VA +F KKYGVPV EE+ D +L TDGPA LAADV Sbjct: 54 GAKLKVWESGGAIGEWTKYVAEEFTKKYGVPVTFEEVGHTDAPEKLKTDGPAGLAADVFA 113 Query: 134 LPHDQISQAVKAGLLLPNDVFEEETKASMVETAVQASSYDGVLYGYPKSVETYALFYNKD 193 PHD + V AGL+L N F EE + +++A++ ++ DG LYGYP S+ETYALFYNKD Sbjct: 114 APHDHLGSMVPAGLVLEN-FFPEEYQDKFMKSAIEGTTVDGTLYGYPTSIETYALFYNKD 172 Query: 194 LVPEAPKTWNDIIAFANTYNKPKENKFAIMWEFVG-YYTYPFIGSFGGYIFGDSNSNPKD 252 LV + PKT +++I A + NK+ M E Y+ Y FIG +GGY+FGD+N+NPKD Sbjct: 173 LVKKLPKTMDELITQAKELTDIRNNKYGFMMEVANLYFVYSFIGGYGGYVFGDNNTNPKD 232 Query: 253 IGLNNEGTIKGFTFLQSL-KKILPLNAGDITFDVKTQLFQEGKLAMNIDGPWSTGSFKDH 311 IGLNNEG +K +Q + K+ILPL DIT+DVK LF EGKLA NIDGPW+ +D Sbjct: 233 IGLNNEGAVKAGKLMQRIHKEILPLKVEDITYDVKQSLFNEGKLAFNIDGPWAVAGHRDA 292 Query: 312 -VNFGVVPLPKGPNGEEMISFSGVKSYYVNSYTAYPVAARLFAHFASSKDNQLKNYKMTG 370 VNFGV+PLPK NG+ SFSG++++YVN+YT YP AA LFA FA+S++ LK ++MTG Sbjct: 293 GVNFGVIPLPKLENGQTPTSFSGIRAFYVNAYTKYPNAASLFAKFATSEEMLLKRFEMTG 352 Query: 371 AIPASIEAGESQEIKNDPITLGFFEQFQHSVPMPAISEINAVWEPLKAAFVSLWNDPGLD 430 +P +++ IKND I F EQ +++VPMP I ++ VWEP+ +A ++WND G D Sbjct: 353 QLPPVQSLLDNETIKNDEIASAFLEQAKYAVPMPNIPQMPMVWEPMASALTTIWND-GKD 411 Query: 431 VKQTMDQTVKTIQSDLESK 449 K+ +D V I++ + ++ Sbjct: 412 PKEALDAAVDQIKAGIATQ 430 >B0K7T3.1 B0K7T3_THEP3 Extracellular solute-binding protein, family 1 Length = 429 Score = 365 bits (936), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 188/433 (43%), Positives = 273/433 (63%), Gaps = 11/433 (2%) Query: 18 MNAVSKIVVLCMLLVMTATACSSNSPNTAPSPKGGNNQTAETSAPENTADPEMEPEQGAK 77 M +KI+ L ++V +A + + + Q +ET + E++PE GAK Sbjct: 1 MKKYTKIIALLTVMVFALSAALTGCGGSKITETEEKAQVSETET-----NQELKPEPGAK 55 Query: 78 LMVWEAK-EQLEYMKGVAADFEKKYGVPVNVEELAGGDQGGRLATDGPAKLAADVLTLPH 136 L+VWE++ + E+++ A F +KYGV V E + D GRLATDGPA + ADV PH Sbjct: 56 LLVWESEGPEGEFIQYAAKKFTEKYGVEVVYEPVTHTDARGRLATDGPAGIGADVFAAPH 115 Query: 137 DQISQAVKAGLLLPNDVFEEETKASMVETAVQASSYDGVLYGYPKSVETYALFYNKDLVP 196 D + V +GL+ PND+F + + ++ AV A SY GV+YGYP +ETYALFYNKD V Sbjct: 116 DHTGELVVSGLIQPNDIFADRIRNEFMQGAVDAVSYQGVVYGYPTGIETYALFYNKDYVK 175 Query: 197 EAPKTWNDIIAFANTYNKPKENKFAIMWEFVG--YYTYPFIGSFGGYIFGDSNSNPKDIG 254 E PKT+ D+I FA +N P +N+FA MW+ VG Y+++ FI +GGY+FGD +N DIG Sbjct: 176 EPPKTYEDLIKFAKEFNNPAKNQFAFMWD-VGNAYFSHSFIAGYGGYVFGDGGTNKDDIG 234 Query: 255 LNNEGTIKGFTFLQSLKKILPLNAGDITFDVKTQLFQEGKLAMNIDGPWSTGSFKDH-VN 313 LN++ ++G FL SLK+ILPL D + V +F+EGK AM I+GPW+ +++ VN Sbjct: 235 LNSKEAVEGAKFLVSLKEILPLKTDDTNYQVMDGMFKEGKAAMIINGPWAVRGYQEAGVN 294 Query: 314 FGVVPLPKGPNGEEMISFSGVKSYYVNSYTAYPVAARLFAHFASSKDNQLKNYKMTGAIP 373 FG+ PLP PN + SFSGV++ +V++YT YP AA+LFA F +S++ LK Y++T IP Sbjct: 295 FGIAPLPLLPNDKHPASFSGVRTMFVSAYTKYPKAAKLFADFITSEEMLLKRYEITKQIP 354 Query: 374 ASIEAGESQEIKNDPITLGFFEQFQHSVPMPAISEINAVWEPLKAAFVSLWNDPGLDVKQ 433 ++ IKNDP F EQ Q +VPMP+I ++ VWEP AF +WND G+D ++ Sbjct: 355 PMKSLMDADIIKNDPYAAPFLEQAQFAVPMPSIPQMGVVWEPYARAFQVMWND-GVDPQK 413 Query: 434 TMDQTVKTIQSDL 446 +D+ V+TI+ + Sbjct: 414 ALDEAVQTIKDAI 426 >C3J2S5.1 C3J2S5_9BACI Extracellular solute-binding protein family 1 Length = 424 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 151/442 (34%), Positives = 240/442 (54%), Gaps = 34/442 (7%) Query: 18 MNAVSKIVVLCMLLVMTATACSSNSPNTAPSPKGGNNQTAETSAPENTADPEMEPEQGAK 77 M + ++ +LL+ AC PKG + +TAE + +PE K Sbjct: 1 MRKALSLFLMAVLLIGVLGACGPK--RDVQQPKGNDQKTAEQ---------DKKPE---K 46 Query: 78 LMVW--EAKEQLEYMKGVAADFEKKYGVPVNVEELAGGDQGGRLATDGPAKLAADVLTLP 135 L+VW + ++Q + +K + + +K G+ + + ++ DQ +LA DGPA DV P Sbjct: 47 LVVWVNDDEKQKQALKDIFQKYTEKTGIKIEMAAVSMLDQTKKLALDGPAGKGPDVFYQP 106 Query: 136 HDQISQAVKAGLLLPNDVFEEETKASMVETAVQASSYDGVLYGYPKSVETYALFYNKDLV 195 HD+I V GL P D+ + K TA+ A +YDG YG P VETY +FYNK+LV Sbjct: 107 HDRIGDIVLQGLADPVDL--GDAKGEYSPTAINAVTYDGKTYGVPMVVETYGVFYNKNLV 164 Query: 196 PEAPKTWNDIIAFANTYNKPKENKFAIMWEFVGYY-TYPFIGSFGGYIFGDSNS--NPKD 252 PEAPKT +D++ A ++++ + E +Y YPF +GGY+F + N + D Sbjct: 165 PEAPKTMDDLMKIAKEKTNAAKDQYGFLMEATNFYFVYPFFAGYGGYVFKNENGKYDTSD 224 Query: 253 IGLNNEGTIKGFTFLQSLKK--ILPLNAGDITFDVKTQLFQEGKLAMNIDGPWSTGSFKD 310 IGL N+G +KG +QS K +P +IT D+ LF +G +A+ I GPW+ S+K+ Sbjct: 225 IGLANDGAVKGAELVQSWFKNGYIP---KEITGDIMNGLFTKGNVAVAITGPWNIASYKE 281 Query: 311 HV--NFGVVPLPKGPNGEEMISFSGVKSYYVNSYTAYPVAARLFAHFASSKDNQLKNYKM 368 + PLP NGE SF GVK++ +++Y+ A F F ++++N L Y++ Sbjct: 282 ALGDKLATAPLPVLDNGEHPKSFVGVKTWMLSAYSQNKEWAVDFMKFVTNEENSLHYYEV 341 Query: 369 TGAIPASIEAGESQEIKNDPITLGFFEQFQHSVPMPAISEINAVWEPLKAA--FVSLWND 426 G +PA+ +A +++I NDP+ GF EQ Q+ PMP + E++ VWEP+ A F++ ++ Sbjct: 342 AGEMPANEKALTNEKITNDPLIAGFAEQIQYGEPMPNVPEMSQVWEPMGNALQFIAKGDN 401 Query: 427 PGLDVKQTMDQTVKTIQSDLES 448 P K + + VKTIQ + + Sbjct: 402 P----KAVLGEAVKTIQDKIAA 419 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.131 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,829,658,049 Number of extensions: 125069025 Number of successful extensions: 305055 Number of sequences better than 1.0e-05: 1165 Number of HSP's gapped: 302652 Number of HSP's successfully gapped: 1165 Length of query: 449 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 310 Effective length of database: 1,751,175,118 Effective search space: 542864286580 Effective search space used: 542864286580 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 133 (55.8 bits)