BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0168.0004.p (241 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDI7.1 B3KDI7_9BACI Pirin domain protein 222 2e-56 B7GJT2.1 B7GJT2_ANOFW Pirin-related protein 197 7e-49 A4IST2.1 A4IST2_GEOTN Putative pirin-like protein 183 1e-44 A9U7S7.1 A9U7S7_PHYPA Predicted protein (Fragment) 183 1e-44 B4BN82.1 B4BN82_9BACI Pirin domain protein 182 2e-44 >B3KDI7.1 B3KDI7_9BACI Pirin domain protein Length = 239 Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 106/239 (44%), Positives = 156/239 (65%) Query: 3 MIKVITSAERHTSNREWIHSEFSFSFADYDDPSNAHFGALLAHNDNELSPGQGMHEHPHH 62 MIK++T+AERHT++ + IHSEFSFSF DY DP N HFG+LLAHN+ L P +G HH Sbjct: 1 MIKIMTAAERHTTHEDGIHSEFSFSFGDYIDPHNEHFGSLLAHNEYVLQPMEGFDRRFHH 60 Query: 63 DLEIITYVVSGVLKHQDDLGNHAELQGGSVQVMSAGTGINHSETNPSDSEHVRFLQIWLL 122 DL I+ V+ G L ++DD G EL G++ V++ G+G+ H+E N S SE VR+L++W L Sbjct: 61 DLVIVHLVLEGTLTYEDDTGKLMELTPGTIHVVNTGSGVYHAERNASSSEDVRYLEMWFL 120 Query: 123 PDQPGRQPKWDAKFYPAEHKTNTLLPVASGKGEEGALEIHENVTVYLSSLERSRELKYQQ 182 P +PG + + E + N +LP+ + +L +V +Y S LE +EL Y Sbjct: 121 PAEPGLETSHHQSNFTKEQQLNQMLPIIGSGNGKSSLPQSLDVVMYSSILETGQELTYSL 180 Query: 183 REDRRTHIYLISGHLEIACSDGVFQLEPGDAARIRKSCDLHLKGTGSDSNAEFILIDLP 241 DRR H+Y+I+GH+EI+ DGVF ++ GDAARI++ +L +G S+ ++E +LID+P Sbjct: 181 AGDRRMHLYVINGHVEISSEDGVFDIKAGDAARIQRRHELTFRGNSSEGSSEMVLIDMP 239 >B7GJT2.1 B7GJT2_ANOFW Pirin-related protein Length = 234 Score = 197 bits (501), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 105/241 (43%), Positives = 150/241 (62%), Gaps = 9/241 (3%) Query: 3 MIKVITSAERHTSNREWIHSEFSFSFADYDDPSNAHFGALLAHNDNELSPGQGMHEHPHH 62 MI V + ER SN W+ S FSFSFA+Y D N +FG L ND+ ++P +G HPH Sbjct: 1 MIYVYPAHERFESNHGWLQSYFSFSFAEYFDRKNMNFGPLRVFNDDIIAPQRGFGAHPHQ 60 Query: 63 DLEIITYVVSGVLKHQDDLGNHAELQGGSVQVMSAGTGINHSETNPSDSEHVRFLQIWLL 122 ++EI+T V+ G L+H+D+LGNH + G VQ M+AGTGI HSE NPS +E V LQ+W L Sbjct: 61 EMEIVTVVLKGQLEHRDNLGNHRIISFGEVQRMTAGTGIVHSEMNPSTTEEVNLLQLWFL 120 Query: 123 PDQPGRQPKWDAKFYPAEHKTNTLLPVASGK--GEEGALEIHENVTVYLSSLERSRELKY 180 PD G P ++ Y E N LLP+ S G++ A IH+++T+YLS LE ++ + + Sbjct: 121 PDTYGLTPSYEQVSYDIEKMKNRLLPIVSQTQAGDQVAY-IHQDITMYLSDLENNQHITF 179 Query: 181 QQREDRRTHIYLISGHLEIACSDGVFQLEPGDAARIRKSCDLHLKGTGSDSNAEFILIDL 240 Q+E RR ++++I G E+ +D L+ DAARI LH+ + +N+ F+LIDL Sbjct: 180 HQQEGRRIYLFVIEG--ELVLNDDTM-LQRRDAARITDITTLHIT---AKTNSRFMLIDL 233 Query: 241 P 241 P Sbjct: 234 P 234 >A4IST2.1 A4IST2_GEOTN Putative pirin-like protein Length = 235 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 144/240 (60%), Gaps = 7/240 (2%) Query: 3 MIKVITSAERHTSNREWIHSEFSFSFADYDDPSNAHFGALLAHNDNELSPGQGMHEHPHH 62 MI++ ++ R+ ++ W+ + SFSF +Y DP+N FG L ND+ ++P G HPH Sbjct: 1 MIRIDRASSRYHADYGWLKTYHSFSFGEYYDPNNIQFGPLRVLNDDVIAPLAGFGAHPHR 60 Query: 63 DLEIITYVVSGVLKHQDDLGNHAELQGGSVQVMSAGTGINHSETNPSDSEHVRFLQIWLL 122 ++EI++ V+ G L+H+D G+ A G VQ MSAGTGI HSE NPS +E V FLQ+W L Sbjct: 61 EMEIVSIVLKGYLQHEDSTGHKAVTTFGGVQRMSAGTGIVHSEVNPSATEEVNFLQLWFL 120 Query: 123 PDQPGRQPKWDAKFYPAEHKTNTLLPVASGK-GEEGALEIHENVTVYLSSLERSRELKYQ 181 P++ G P ++ +P E N LLPV + + G IH ++T+YLS LE EL + Sbjct: 121 PEEYGLTPSYERVEFPVEKMRNALLPVVAKQPSSPGIAHIHHDLTIYLSDLEAGHELTFT 180 Query: 182 QREDRRTHIYLISGHLEIACSDGVFQLEPGDAARIRKSCDLHLKGTGSDSNAEFILIDLP 241 Q E+R +++I G L + +G L+ DAARI ++ L L ++ A F+LIDLP Sbjct: 181 QPEERNIFVFVIEGDLSL---NGEADLQRRDAARITETPTLRLL---TNEGARFMLIDLP 234 >A9U7S7.1 A9U7S7_PHYPA Predicted protein (Fragment) Length = 269 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 83/112 (74%), Positives = 96/112 (85%) Query: 1 MIMIKVITSAERHTSNREWIHSEFSFSFADYDDPSNAHFGALLAHNDNELSPGQGMHEHP 60 M MIKV+TSAERHTS R WIHSEFSFSFADYDDPSNAHFG LLAHNDN+LSP QG +HP Sbjct: 157 MEMIKVVTSAERHTSERGWIHSEFSFSFADYDDPSNAHFGCLLAHNDNQLSPKQGFKKHP 216 Query: 61 HHDLEIITYVVSGVLKHQDDLGNHAELQGGSVQVMSAGTGINHSETNPSDSE 112 HHDLEI++YV+SG L+H DD+GN +L G+VQ MSAG+G+ HSETNPS+ E Sbjct: 217 HHDLEIVSYVISGTLEHNDDMGNQVQLPAGTVQAMSAGSGVMHSETNPSEEE 268 >B4BN82.1 B4BN82_9BACI Pirin domain protein Length = 235 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 143/240 (59%), Gaps = 7/240 (2%) Query: 3 MIKVITSAERHTSNREWIHSEFSFSFADYDDPSNAHFGALLAHNDNELSPGQGMHEHPHH 62 MI++ ++ R+ ++ W+ + SFSF +Y DP+N FG L ND+ ++P G HPH Sbjct: 1 MIRIDRASSRYHADYGWLKTYHSFSFGEYYDPNNIQFGPLRVLNDDVIAPLAGFGAHPHR 60 Query: 63 DLEIITYVVSGVLKHQDDLGNHAELQGGSVQVMSAGTGINHSETNPSDSEHVRFLQIWLL 122 ++EI++ V+ G L+H+D G+ A G VQ MSAGTGI HSE NPS +E V FLQ+W L Sbjct: 61 EMEIVSIVLKGYLQHEDSTGHKAVTTFGGVQRMSAGTGIVHSEVNPSTTEEVNFLQLWFL 120 Query: 123 PDQPGRQPKWDAKFYPAEHKTNTLLPVASGK-GEEGALEIHENVTVYLSSLERSRELKYQ 181 P++ G P ++ +P E N LLPV + + G IH+++T+YLS LE EL + Sbjct: 121 PEEYGLTPSYERVEFPVEKMRNALLPVVAKQPSSPGIAHIHQDLTIYLSDLEAGHELTFT 180 Query: 182 QREDRRTHIYLISGHLEIACSDGVFQLEPGDAARIRKSCDLHLKGTGSDSNAEFILIDLP 241 Q E R ++I G L + +G L+ DAARI ++ L L ++ A F+LIDLP Sbjct: 181 QPEGRNIFAFVIEGDLSL---NGEADLQRRDAARITETPTLRLL---TNEGARFMLIDLP 234 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.133 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,561,374,842 Number of extensions: 66932880 Number of successful extensions: 136524 Number of sequences better than 1.0e-05: 1597 Number of HSP's gapped: 135873 Number of HSP's successfully gapped: 1597 Length of query: 241 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 109 Effective length of database: 1,817,122,223 Effective search space: 198066322307 Effective search space used: 198066322307 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 129 (54.3 bits)