BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0167.0022.p
         (191 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K5I7.1 B3K5I7_9BACI Putative uncharacterized protein                208   2e-52
B1DB40.1 B1DB40_9BACL Putative uncharacterized protein                166   1e-39
B1DCG1.1 B1DCG1_9BACL Putative uncharacterized protein                108   2e-22
A9KMI0.1 A9KMI0_CLOPH Putative uncharacterized protein                 73   1e-11

>B3K5I7.1 B3K5I7_9BACI Putative uncharacterized protein
          Length = 228

 Score =  208 bits (530), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/185 (53%), Positives = 121/185 (65%)

Query: 6   VTRLSIFKGGKELFLYYECGGERHEPEKLLADNGELLQVWPGGEQPRWWAPMMDIFHYQQ 65
           V RLS+F  G  LFLYYEC GE+  PE LL +    L VWPGG   R WA M DIFHYQ 
Sbjct: 40  VPRLSLFADGSRLFLYYECRGEQVLPEILLPEANSWLAVWPGGGLERRWAAMTDIFHYQA 99

Query: 66  PVSREYWKRSQGERTPFGRVAVLKPXXXXXXXXXXXXXXXXRPGDGDKYGIIGLHENLLF 125
           P S ++W+R   +  P+GR+A LKP                RPGDGDKYGIIGLHEN+LF
Sbjct: 100 PASEQHWERRNKDSVPYGRIARLKPEETASYVYYHYQYQEERPGDGDKYGIIGLHENMLF 159

Query: 126 FYSELPATVEPVPYSGKLTTNLRPEHWGEVMEPHFIKWGDAQPDQEIWKKLTMVLNVAVP 185
           FYSELPAT+EP PY GKL T+LRP+ W   M+PHFIKW +A   QEIW++L +V  V + 
Sbjct: 160 FYSELPATLEPAPYKGKLNTSLRPDDWAAAMDPHFIKWEEASSGQEIWRELELVREVRIS 219

Query: 186 AGKKE 190
             +++
Sbjct: 220 DERQD 224


>B1DB40.1 B1DB40_9BACL Putative uncharacterized protein
          Length = 223

 Score =  166 bits (419), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/182 (46%), Positives = 104/182 (57%)

Query: 1   MELLDVTRLSIFKGGKELFLYYECGGERHEPEKLLADNGELLQVWPGGEQPRWWAPMMDI 60
           M+   V  LS+F  G +LFLYYE      +P  L       L+ WPG + PR W PMMDI
Sbjct: 31  MKEAKVHHLSLFHYGSKLFLYYESPLMDADPHTLFRYCESGLEPWPGADTPRRWVPMMDI 90

Query: 61  FHYQQPVSREYWKRSQGERTPFGRVAVLKPXXXXXXXXXXXXXXXXRPGDGDKYGIIGLH 120
           FHYQQPV  E W+RS+    P+ R+A LKP                RPGDGDKYG+I L+
Sbjct: 91  FHYQQPVGEEPWRRSRLSPKPYARIARLKPEQVASYIFYHYQYQEERPGDGDKYGMIALY 150

Query: 121 ENLLFFYSELPATVEPVPYSGKLTTNLRPEHWGEVMEPHFIKWGDAQPDQEIWKKLTMVL 180
           ENLLFFYSE PAT+EP PY+GKL T   P  W   M+PHFI W         W ++ ++L
Sbjct: 151 ENLLFFYSESPATIEPPPYTGKLATANTPSDWQAAMDPHFIMWDQDTGKSLAWLEIPLLL 210

Query: 181 NV 182
            +
Sbjct: 211 QL 212


>B1DCG1.1 B1DCG1_9BACL Putative uncharacterized protein
          Length = 219

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 76/159 (47%), Gaps = 1/159 (0%)

Query: 10  SIFKGGKELFLYYECGGERHEPEKLLADNGELLQVWPGGEQPRWWAPMMDIFHYQQPVSR 69
           + F     LFLYYEC   +  PE++       L  WPG  +PR W  MMD+FH+ +P  R
Sbjct: 42  AAFYWNHNLFLYYECTDGKLAPEEVAGAAEPYLTDWPGQAEPRKWIRMMDVFHFNEPADR 101

Query: 70  EYWKRSQGERTPFGRVAVLKPXXXXXXXXXXXXXXXXRPGDGDKYGIIGLHENLLFFYSE 129
           E+W R        GRVA LKP                R   G KY IIG+HENLLF Y E
Sbjct: 102 EHWLRKHPVERRVGRVAHLKPEMIGSYVYYHYQLQEERAFFGPKYEIIGIHENLLFGYQE 161

Query: 130 LPATVEPVPYSGKLTTNLRPEHWGEV-MEPHFIKWGDAQ 167
            P   E     G+L T   PE+W +  M+ HF  W D  
Sbjct: 162 FPNVTEEPVKPGRLQTTGTPENWSDSRMDLHFQPWEDGH 200


>A9KMI0.1 A9KMI0_CLOPH Putative uncharacterized protein
          Length = 222

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 71/164 (43%), Gaps = 4/164 (2%)

Query: 6   VTRLSIFKGGKELFLYYECGGERHEPEKLLADNGELLQVWPGGEQPRWWAPMMDIFHYQQ 65
           V    +++    LF YYE  G++  PE++  +    L  WPG + PR W  M  I+ +  
Sbjct: 42  VMTACLYRHENMLFAYYEAIGDKLSPEEVFGNLHSCLAKWPGEDAPRDWVRMHHIYWHCI 101

Query: 66  PVSREYWKRSQGERTPFGRVAVLKPXXXXXXXXXXXXXXXXRPGDGDKYGIIGLHENLLF 125
           P   E WKR+       GR+A LK                     GDKY  IGLHEN+LF
Sbjct: 102 PEGVEDWKRATRPELRRGRIAYLKSDTMFEYVYHHVAITDEGLLVGDKYQSIGLHENILF 161

Query: 126 FYSELPATVEPVPYSGKLTTNLRPEHWGEVMEP--HFIKWGDAQ 167
            Y E P T   +       +    E W  V +P  HFI W + Q
Sbjct: 162 SYFEEPKTEINIKRDASKPSKA-IEDWLRV-DPGAHFILWENDQ 203


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.140    0.458 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,250,753,259
Number of extensions: 52677356
Number of successful extensions: 149052
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 149049
Number of HSP's successfully gapped: 4
Length of query: 191
Length of database: 3,060,696,203
Length adjustment: 128
Effective length of query: 63
Effective length of database: 1,854,806,283
Effective search space: 116852795829
Effective search space used: 116852795829
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)