BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0167.0021.p (1122 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K5I6.1 B3K5I6_9BACI Glycoside hydrolase family 2 sugar binding 1249 0.0 B1DB39.1 B1DB39_9BACL Glycoside hydrolase family 2 TIM barrel 1182 0.0 B7AGD1.1 B7AGD1_9BACE Putative uncharacterized protein 243 8e-62 B3CHV8.1 B3CHV8_9BACE Putative uncharacterized protein 243 1e-61 Q8A6V8.1 Q8A6V8_BACTN Beta-galactosidase 225 3e-56 >B3K5I6.1 B3K5I6_9BACI Glycoside hydrolase family 2 sugar binding Length = 1405 Score = 1249 bits (3231), Expect = 0.0, Method: Compositional matrix adjust. Identities = 643/1107 (58%), Positives = 755/1107 (68%), Gaps = 66/1107 (5%) Query: 1 LNGEWDFMPLYGQPLNRTLPERLVYEARKVQVPSSWRHGYPQPSGKKFGEVAEHGFAPLD 60 LNGEWDFMPLY QP R LP+ +VYE V+VPSSWR Y QP+G+ FGE+ EHG+AP+D Sbjct: 7 LNGEWDFMPLYDQPQRRQLPDEIVYEPEPVRVPSSWRRSYEQPNGRMFGEIHEHGYAPMD 66 Query: 61 VYGYPREWDAAEAGVLHRSFQVPETMLGQRIVLRFDGIMQKAAVYLDRERIAVWEDGYLP 120 +Y YP+ WDAAEAGVLHR F++PE M GQRIVLR DGIMQKA ++LD +AVWEDGYLP Sbjct: 67 LYSYPKAWDAAEAGVLHRCFRIPEHMAGQRIVLRLDGIMQKAVLFLDGAEVAVWEDGYLP 126 Query: 121 LRLDISSRVKPGEEQHLHVVCGSFDQTVLPSGDRKITGLAGSWFGRMARGIWQDVF---- 176 LRLDI+S V PG E HLHV+CGSFD+ LPSG K+TGL GSWFG +ARGIWQDV+ Sbjct: 127 LRLDITSSVAPGREHHLHVLCGSFDRVKLPSGMEKVTGLTGSWFGNVARGIWQDVYLESY 186 Query: 177 ----LESYPLVT---------------------LEDITIRTLFRQ-GLLEVDALI----- 205 LE + T L I +R R+ G+L D + Sbjct: 187 PVLSLEDVTICTSVRKKRLELAVIAGTTETAAALGPIHVRLSVRELGVLRQDGELSEARD 246 Query: 206 GTESGSAY-------AEP-------LRVFLKVNDRKPG---------ALPVLEAEAGAEA 242 SGS A+P + + +R+ G A+PVL AE AE Sbjct: 247 ADSSGSGIHRYGAQDAKPQQAQGRGIETERHLVERRTGGRSEAEDKLAVPVLLAEQLAEQ 306 Query: 243 VPLQAGEGRQLCENADNREWQKARFVLSWPDARLWSPETPNLYELELELRAGGETLDRRT 302 V A +LCEN +A F L W DA+LW+P+TP LY LEL AG + LDRR Sbjct: 307 VDPSAVGMLRLCENERVGAVYRASFTLDWQDAKLWNPDTPFLYVAVLELVAGEQVLDRRE 366 Query: 303 GTFGFREFWCEGPQFMLNGTPVNLRGDSWHFQGAAQQTEGYIRNWYRMCRQAGVNSIRLH 362 FGFREFWCEGPQFMLNG P++LRGDSWHFQG QQ E YIRNWYRMCR G+NSIRLH Sbjct: 367 EVFGFREFWCEGPQFMLNGIPIHLRGDSWHFQGGLQQMETYIRNWYRMCRSVGINSIRLH 426 Query: 363 AEPYPSDYLRIADEEGMLIVDETAIYGSSKSMDANHPDFIANCRAHVQRLVQRDKNHPSV 422 AEPYP DY+RIADEEGMLI+DETAIYGS KSM A+HP+++A+CR HVQRLV+RDKNHPSV Sbjct: 427 AEPYPEDYVRIADEEGMLIIDETAIYGSGKSMLADHPEYLAHCRLHVQRLVRRDKNHPSV 486 Query: 423 ILWSVQNEMRWVDGRDGYKQHIPGLMKLMRDLDSTRPIMVEGDNRLLPKELTEVESRHYN 482 I+WS+QNEMRWVDGRDGY+ IPG M+ MR+LD TRPI+ EGDNRLL K TEVESRHYN Sbjct: 487 IMWSLQNEMRWVDGRDGYRSQIPGFMEAMRELDPTRPIIAEGDNRLLSKAHTEVESRHYN 546 Query: 483 IDGTISQWDRTVPLTFGEHGGWWYICPQNSSMYVGLGAYRDTDASAAGLAQKERLFVEYA 542 IDGTI+QWDR++PLTFGEHGGWWYICPQN+SMY GL AYR TD S AGLA KERLFVEYA Sbjct: 547 IDGTIAQWDRSIPLTFGEHGGWWYICPQNASMYAGLQAYRGTDESTAGLAHKERLFVEYA 606 Query: 543 RRQGVSGISTFNFVHYFMRAMPDRDIALPPADLTEPGPKPVLIPAYSLSLNNGLLPEEYP 602 RRQGVSGI+TFNF HYFMR+MP+ D+A PP + PG P IPAYSL++NNG+LP ++P Sbjct: 607 RRQGVSGIATFNFAHYFMRSMPENDVAAPPLEPGLPGVSPKKIPAYSLTINNGMLP-DHP 665 Query: 603 AYRVNPSFDIMAEAFKPVTMIAAEYNRCFFDDSPIRRSFDVYNDTLAEQAVTIECTVQQD 662 Y NP+F IMAEA KPVTM AAEYN CFFDD+PI RSFDV+NDTL+ Q V IEC V Q Sbjct: 666 MYLPNPAFAIMAEALKPVTMFAAEYNGCFFDDAPISRSFDVFNDTLSAQDVRIECEVMQG 725 Query: 663 GRVVHTRAFSFRQEPAERRCIRLEWMPDSVDGEGEAVLAARLFHGGELKHELSLSYRLLS 722 +V R F+FRQEPAE + + W+P VD EG A+L A LFHG L EL YRL+ Sbjct: 726 ETIVLDRIFTFRQEPAESKAFEITWIPIPVDTEGTALLKASLFHGERLMFELRKEYRLVP 785 Query: 723 GSCKTAPVALELPAVYTGSDRDYEVIKVLVPDLDRIDPEAIEQLPGGILLIVGSKMPDMD 782 GS PV + PA Y GS+ DY I+ LVP +R + +AI L LLI+GS D D Sbjct: 786 GSLLHDPVEVGRPAAYWGSEEDYIRIRRLVPGCERANRDAIALLSSDDLLIIGSNAEDPD 845 Query: 783 GGLDRKLRGFVQQGGRXXXXXXXXXSPGKLPLVRREFIRAQAGSYEHPVLQGLGDEDLMF 842 G L+ +L+ FV +GGR S G++ L RR F+RA AG Y HPVL+GL D+DLMF Sbjct: 846 GRLEAELKAFVARGGRLLLLEQTGLSLGRITLSRRPFLRAHAGDYRHPVLKGLSDKDLMF 905 Query: 843 WHEELREEGPLPIIKAAFEKPVTGDFTLLLECSSGDFGDGGDLWSPLLEYRNGAGMFLAN 902 WHEELREEGPLPII+AAFEKPV GDFTLLLECS+GDFGDGGDLWSPLLEYR+G+GMFLAN Sbjct: 906 WHEELREEGPLPIIRAAFEKPVHGDFTLLLECSAGDFGDGGDLWSPLLEYRSGSGMFLAN 965 Query: 903 QLEIMDHLHRIPQACXXXXXXXXXXXXXXXXXX-XXXXXXXWVRSGSPAEALLRKLRLKG 961 QLEIM +L R+PQAC V G A L +LRL+ Sbjct: 966 QLEIMANLDRVPQACLLLRNLLAYAGRSEEAAVPAMRTAGALVSPGGTTAAFLDRLRLRY 1025 Query: 962 TWLDXXXXXXXXXXXXX------VVEAXXXLLNGPGAAEAVRQAASAGSRVLVLPAEPGG 1015 LD ++ A LL PGAAEAV++ A AG VLVLPA+ Sbjct: 1026 KVLDAAAVIGEAAERESSEPSFGLLMAEACLLGSPGAAEAVKRYAEAGGHVLVLPADSSQ 1085 Query: 1016 QEALARLLDRPVRIAPHGTYHLEADYA 1042 Q+ LARLL RPVR+ PH YHL ADY+ Sbjct: 1086 QDTLARLLGRPVRVEPHEAYHLAADYS 1112 >B1DB39.1 B1DB39_9BACL Glycoside hydrolase family 2 TIM barrel Length = 1324 Score = 1182 bits (3059), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/1058 (55%), Positives = 722/1058 (68%), Gaps = 24/1058 (2%) Query: 1 LNGEWDFMPLYGQPLNRTLPERLVYEARKVQVPSSWRHGYPQPSGKKFGEVAEHGFAPLD 60 LNGEWDFMPLY L+ LPE+L+YE +KVQVPSSWR Y + SGK FGE+AEHG+AP D Sbjct: 7 LNGEWDFMPLYEHGLDLILPEQLIYEEQKVQVPSSWRSSYVRASGKSFGEIAEHGYAPYD 66 Query: 61 VYGYPREWDAAEAGVLHRSFQVPETMLGQRIVLRFDGIMQKAAVYLDRERIAVWEDGYLP 120 +YGYP+EW A+AGVLHR FQ PE +R+ LRFDGIMQKAA+YLD E IA+W DGYLP Sbjct: 67 LYGYPKEWARADAGVLHRVFQAPEER-NERLFLRFDGIMQKAAIYLDHELIAIWGDGYLP 125 Query: 121 LRLDISSRVKPGEEQHLHVVCGSFDQTVLPSGDRKITGLAGSWFGRMARGIWQDVFLESY 180 L ++++ R++ G LHVVCGSFD+ +PSG +K+TGL GSWFG +ARG+W DV+LES Sbjct: 126 LLVEVTERIQAGINHQLHVVCGSFDKVTIPSGQQKVTGLVGSWFGALARGLWADVYLESK 185 Query: 181 PLVTLEDITIRTLFRQGLLEVDALIGTESGSAYAEPLRVFLKVNDRKP-GALPVLEAEAG 239 PL++L D+TIRT R+G L V I +RV L++ + + P++ AEA Sbjct: 186 PLLSLSDVTIRTSVREGRLHVSTGISHPYMEQLDPSIRVGLRIRESSSQTSSPIITAEAV 245 Query: 240 AEAVPLQAGEGRQLCENADNREWQKARFVLSWPDARLWSPETPNLYELELELRAGGETLD 299 + +G G+ +A F + W DA+LW+P+ P LY LEL L G LD Sbjct: 246 SGD---WSGYGQS----------SQAIFSIEWADAKLWNPDHPFLYTLELVLIDGDRILD 292 Query: 300 RRTGTFGFREFWCEGPQFMLNGTPVNLRGDSWHFQGAAQQTEGYIRNWYRMCRQAGVNSI 359 R FGFRE EGP+F LNGTP+NLRGDSWHFQG QQT+ Y+RNWYRMC++AG N + Sbjct: 293 RLEERFGFREITSEGPKFYLNGTPLNLRGDSWHFQGGIQQTKEYVRNWYRMCKEAGANCV 352 Query: 360 RLHAEPYPSDYLRIADEEGMLIVDETAIYGSSKSMDANHPDFIANCRAHVQRLVQRDKNH 419 RLHAEP+P+ YL IADEEGMLIVDETAIYGSSKSM A+HP+FI NC+ H++RLV+RDKNH Sbjct: 353 RLHAEPHPAYYLDIADEEGMLIVDETAIYGSSKSMQADHPEFITNCKDHIRRLVERDKNH 412 Query: 420 PSVILWSVQNEMRWVDGRDGYKQHIPGLMKLMRDLDSTRPIMVEGDNRLLPKELTEVESR 479 PSVILWS+QNEMRWVDGRDG+KQHIP +M ++R+LD TRPI++EGDNRLL KELTEVE+R Sbjct: 413 PSVILWSLQNEMRWVDGRDGFKQHIPSMMAIIRELDPTRPILLEGDNRLLAKELTEVETR 472 Query: 480 HYNIDGTISQWDRTVPLTFGEHGGWWYICPQNSSMYVGLGAYRDTDASAAGLAQKERLFV 539 HYNIDGTI WDR PL FGEHGGWWYICPQNSSMYVG AYR+T+ A GLA+KERLF+ Sbjct: 473 HYNIDGTIDGWDRKAPLVFGEHGGWWYICPQNSSMYVGHLAYRNTEECAKGLAEKERLFI 532 Query: 540 EYARRQGVSGISTFNFVHYFMRAMPDRDIALPPADLTEPGPKPVLIPAYSLSLNNGLLPE 599 EYARRQGVSG+STFNF HYFMRAMP+RDI L D GP+ +IP YSL+LNNGLLPE Sbjct: 533 EYARRQGVSGLSTFNFAHYFMRAMPERDIPLQLPDSDAEGPQLKVIPRYSLTLNNGLLPE 592 Query: 600 EYPAYRVNPSFDIMAEAFKPVTMIAAEYNRCFFDDSPIRRSFDVYNDTLAEQAVTIECTV 659 EYP YR NPSFDI+A AFKP T+I EYNR FFD+ PI RSFDVYNDTL + T+ C V Sbjct: 593 EYPMYRKNPSFDILAAAFKPATLIPGEYNRSFFDNEPIVRSFDVYNDTLYTRQATVVCEV 652 Query: 660 QQDGRVVHTRAFSFRQEPAERRCIRLEWMPDSVDGEGEAVLAARLFHGGELKHELSLSYR 719 +Q +V+H F F Q PA R + W P+ V A L H HEL LS++ Sbjct: 653 RQKDQVIHRETFEFLQAPANRATVTTTWKPELVSDISSIRFHAVLLHDNVPVHELDLSFK 712 Query: 720 LLSGSCKTAPVALELPAVYTGSDRDYEVIKVLVPDLDRIDPEAIEQLPGGILLIVGSKMP 779 L KT PV + P VY G ++DY +I+ L+PD I E I QL LL+ GSK+ Sbjct: 713 LYPSRYKTEPVVINRPVVYIGGEQDYAIIRALIPDCKPITTEQISQLSPKHLLVAGSKLE 772 Query: 780 DMDGGLDRKLRGFVQQGGRXXXXXXXXXSPGKLPLVRREFIRAQAGSYEHPVLQGLGDED 839 D DG L+ L +V QGGR S G L + R++F+RA +G Y HPVLQGLG++D Sbjct: 773 DPDGRLEEALNRYVSQGGRVVLLEQLHLSFGDLAISRQDFMRAHSGDYSHPVLQGLGNDD 832 Query: 840 LMFWHEELREEGPLPIIKAAFEKPVTGDFTLLLECSSGDFGDGGDLWSPLLEYRNGAGMF 899 L+FWHEELRE+GPLPII AAFEKPV G FT+LLECS+GDFGDGGDLWSPLLEYR+ G+F Sbjct: 833 LIFWHEELREDGPLPIIHAAFEKPVNGPFTMLLECSAGDFGDGGDLWSPLLEYRSNKGLF 892 Query: 900 LANQLEIMDHLHRIPQACXXXXXXXXXXXXXXXXXXXXXXXXXWVRSGSPAEALLRKLRL 959 +ANQLE+ + HR+PQAC +V G EA LR L + Sbjct: 893 VANQLELTANFHRVPQAC--LLLRNLLAYAGNVENTDCRCTGAFVEPGGKTEAFLRTLCV 950 Query: 960 KGTWLDXXXXXXXXXXXXXVVEAXXXLLNGPGAAEAVRQAASAGSRVLVLPAEPGGQEAL 1019 L ++E LL+ +A +R+ A+ G +V++LPA G + L Sbjct: 951 SFDLLQELPSKPLDDYGLILIEP--HLLSDSNSASVIREYAAKGGKVVILPAVDGQEAVL 1008 Query: 1020 ARLLDRPVRIAPHGTYHLEADYAXXXXXXPRIQPCRPV 1057 A LL++ + YHLEADY+ P +Q PV Sbjct: 1009 AALLNQNATVREKAIYHLEADYS-----KPAVQGFSPV 1041 >B7AGD1.1 B7AGD1_9BACE Putative uncharacterized protein Length = 1075 Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 196/671 (29%), Positives = 294/671 (43%), Gaps = 82/671 (12%) Query: 1 LNGEWDFMPL---------YGQPLNRTLPERLVYEARKVQVPSSWRHGYPQPSGKKFGEV 51 LNG WDF P+ G +LPE + A ++++PS W + E Sbjct: 58 LNGFWDFQPVSLPSTYVQGKGVAPELSLPEEKQWSAIRIKIPSPWNIN---AFANRNLEG 114 Query: 52 AEHGFAPLDVYGYPREWDAAEAGVLHRSFQVPETMLGQRIVLRFDGIMQKAAVYLDRERI 111 +H P YP+EW+ + + + +P GQ+I L F+ + VY+++E++ Sbjct: 115 PDHRNYP----SYPKEWEQVKMAWMRKKVTIPTEWTGQQIKLYFEAVAGATEVYINKEKV 170 Query: 112 AVWEDGYLPLRLDISSRVKPGEEQHLHVVCGSFDQTVLPSGD---RKITGLAGSWFGRMA 168 D +LP +DI+ +V GE + V+ G Q++ R+I AGS +G Sbjct: 171 GENFDLFLPFSIDITDKVNAGET--VEVLVGVRSQSLFEDNSTIGRRIVP-AGSMWGYHI 227 Query: 169 RGIWQDVFLESYPLVTLEDITIRTLFRQGLLEVDALIGTESGSAYAEPLRVFLKVN---- 224 GIWQDV+L + P V +EDI ++ L +G+LE++ + ++ A L+V +N Sbjct: 228 AGIWQDVYLLALPKVHVEDIFVKPLVSKGILELEVTV--QNNMAKKADLQVQGDINEWVN 285 Query: 225 ----DRKPGALPV-------LEAEAGAEAVPLQAGEGRQLCENADNREWQKARFVLSWP- 272 D +PV LE +A +VP A + VL P Sbjct: 286 LAGTDVNSAPIPVWKLGKKVLEVKAVKVSVPANAS----------------TKVVLQVPV 329 Query: 273 --DARLWSPETPNLYELELELRAGGETLDRRTGTFGFREFWCEGPQFMLNGTPVNLRGDS 330 + R W+PE PNLY L L L+ + LD + FG+RE+ G LNG P LRGDS Sbjct: 330 SDELRFWTPECPNLYALLLALKVKKQNLDVKYERFGWREWTLNGTVQCLNGKPYQLRGDS 389 Query: 331 WHFQGAAQQTEGYIRNWYRMCRQAGVNSIRLHAEPYPSDYLRIADEEGMLIVDETAIYGS 390 WHF G Q T Y W+ + N++R HA+ YP YL IADE G+ +++ETA + S Sbjct: 390 WHFMGIPQMTRRYAWAWFTAIKGMNGNAVRPHAQVYPRFYLDIADEMGICVLNETANWAS 449 Query: 391 SKSMDANHPDFIANCRAHVQRLVQRDKNHPSVILWSVQNEMRWV--------DGRDGYKQ 442 + F + H+ R V RD+NH SV WS+ NE + V + K+ Sbjct: 450 DGGPKLDSELFWKASKEHLTRFVLRDRNHASVFGWSISNENKPVILHVFNRPELMTPQKK 509 Query: 443 HIPGLMKLMRDLDSTRPIMVEGDNRLLPKELTEVESRHYNIDGTISQW-DRTVPLTFGEH 501 ++R D TRP V D + V HY ++ +W + P GEH Sbjct: 510 AWEEWRNIVRLNDPTRP-WVSSDGEDDGDGILPVTVGHYGDMNSMKRWIEIGKPWGIGEH 568 Query: 502 GGWWYICPQNSSMYVGLGAYRDTDASAAGLAQKERLFVEYARRQGVSGISTFNFVHYFMR 561 +Y P+ + Y G AY GLA + + R S + FN Y ++ Sbjct: 569 SMAYYGTPEQVAKYNGERAYESQLGRMEGLANECYHLLANQRSMDASYSTVFNMAWYSLK 628 Query: 562 AMP--DRDIALPP------ADLTE-----PGPKPVLIPAYSLSLNNGLLPEEYPAYRVNP 608 +P +D+ P TE PG +P + Y + N G P P Y P Sbjct: 629 PLPLGKKDLTSKPDISRDGVFFTEYKEGVPGVQPERVGPYCTTFNPGYDP-NLPLYDPWP 687 Query: 609 SFDIMAEAFKP 619 +D M A P Sbjct: 688 MYDAMRAANAP 698 >B3CHV8.1 B3CHV8_9BACE Putative uncharacterized protein Length = 1075 Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 193/677 (28%), Positives = 302/677 (44%), Gaps = 94/677 (13%) Query: 1 LNGEWDFMPL---------YGQPLNRTLPERLVYEARKVQVPSSWRHGYPQPSGKKFGEV 51 LNG WDF P+ G +LP+ + ++++PS W + E Sbjct: 58 LNGYWDFQPVALPGSYVQGKGVAPELSLPKEGAWSKTRIKIPSPWNI---NSFANRNVEG 114 Query: 52 AEHGFAPLDVYGYPREWDAAEAGVLHRSFQVPETMLGQRIVLRFDGIMQKAAVYLDRERI 111 +H P YP+EW+ + + ++ +P GQ+I L F+ + VY+++E++ Sbjct: 115 PDHRNYP----SYPKEWEQVKMAWMKKTVTIPNDWNGQQIKLYFEAVAGYTEVYINKEKV 170 Query: 112 AVWEDGYLPLRLDISSRVKPGEEQHLHVVCGSFDQTVLPSGD---RKITGLAGSWFGRMA 168 D +LP +DI+++V GE + V G Q++ + R+I AGS +G Sbjct: 171 GENFDLFLPFSIDITNKVAAGETAEVWV--GVRSQSLFENNSTIGRRIVP-AGSMWGYHI 227 Query: 169 RGIWQDVFLESYPLVTLEDITIRTLFRQGLLEVDALIGTESGSAYAEPLRVFLKVND--- 225 GIWQDV+L + P V +ED+ ++ L + +LE++ + ++ + L++ K+N+ Sbjct: 228 AGIWQDVYLLALPKVHVEDVYVKPLVSKNMLELEVTV--QNNTEKKTDLQLQGKINEWVN 285 Query: 226 ---RKPGALPVLEAEAGAEAVPLQAGEGRQLCENADNREWQKARFVLSWP---DARLWSP 279 + PV E G EA+ + A + NA + VL P + W+P Sbjct: 286 LAGTDVNSAPVPAWELGQEALKV-APVKVSIPANAS------TKVVLQVPVSGELSYWTP 338 Query: 280 ETPNLYELELELRAGGETLDRRTGTFGFREFWCEGPQFMLNGTPVNLRGDSWHFQGAAQQ 339 E PNLY + L L+A E LD + FG+RE+ +G LNG P LRGDSWHF G Q Sbjct: 339 EQPNLYAVLLSLQAKKEILDMKYERFGWREWTLQGTTQYLNGKPYQLRGDSWHFMGIPQM 398 Query: 340 TEGYIRNWYRMCRQAGVNSIRLHAEPYPSDYLRIADEEGMLIVDETAIYGSSKSMDANHP 399 T Y W+ + N++R HA+ YP Y+ +ADE G+ +++ETA + S + Sbjct: 399 TRRYAWAWFTAIKGMNANAVRPHAQIYPRFYMDVADEMGICVLNETANWASDGGPKLDSE 458 Query: 400 DFIANCRAHVQRLVQRDKNHPSVILWSVQNEMR-------------------WVDGRDGY 440 F + H++R V RD+NH SV WS+ NE + W D RD Sbjct: 459 LFWEASKEHLKRFVLRDRNHASVFGWSISNENKPVILHVYNRPELMPQQKKAWEDWRD-- 516 Query: 441 KQHIPGLMKLMRDLDSTRP-IMVEGDNR---LLPKELTEVESRHYNIDGTISQWDRT-VP 495 ++R D TRP I +G++ +LP V HY ++ W P Sbjct: 517 ---------IVRANDPTRPWISADGEDDGDGILP-----VTVGHYGDMNSMKHWVGIGKP 562 Query: 496 LTFGEHGGWWYICPQNSSMYVGLGAYRDTDASAAGLAQKERLFVEYARRQGVSGISTFNF 555 GEH +Y P+ + Y G AY GLA + + R G S + FN Sbjct: 563 WGIGEHSMAYYGTPEQVAKYNGERAYESQLGRMEGLANECYHLLANQRNMGASYSTVFNM 622 Query: 556 VHYFMRAMP--DRDIALPP---------ADLTE--PGPKPVLIPAYSLSLNNGLLPEEYP 602 Y ++ +P +D+ P D E PG +P + Y + N G P Sbjct: 623 AWYSLKPLPLGKKDMTTEPDINKDGIFFTDYKEGVPGVQPERVGPYCTTFNPG-YDSNLP 681 Query: 603 AYRVNPSFDIMAEAFKP 619 Y P +D M A P Sbjct: 682 LYDPWPMYDAMRAANAP 698 >Q8A6V8.1 Q8A6V8_BACTN Beta-galactosidase Length = 1085 Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 179/671 (26%), Positives = 298/671 (44%), Gaps = 80/671 (11%) Query: 1 LNGEWDFMPL-------YGQPLNRTLP---ERLVYEARKVQVPSSWRHGYPQPSGKKFGE 50 +NG WDF P+ G+ + LP + ++++PS W Sbjct: 63 INGYWDFQPVRLPKEYVQGKGIAPELPLPENDSEWSKTRIKIPSPWNI------------ 110 Query: 51 VAEHGFAPLDVYG--------YPREWDAAEAGVLHRSFQVPETMLGQRIVLRFDGIMQKA 102 + FA D+ G YP+EW+ + + ++ +P GQ+I L F+ + + Sbjct: 111 ---NAFAYRDLEGPDHRNYPSYPKEWEQVKMAWMKKNVTIPADWSGQQIKLHFEAVAGYS 167 Query: 103 AVYLDRERIAVWEDGYLPLRLDISSRVKPGEEQHLHVVCGSFDQTVLPS----GDRKITG 158 VY+++E++ D +LP DI+ +V GE ++ ++ G Q++ + G R + G Sbjct: 168 EVYVNKEKVGENFDLFLPFSFDITDKVTAGE--NIEILVGVRSQSLFENNATIGRRIVPG 225 Query: 159 LAGSWFGRMARGIWQDVFLESYPLVTLEDITIRTLFRQGLLEVDALIGTESGSAYAEPLR 218 GS +G GIWQDV+L + P + LED+ ++ L + LE++ + + L+ Sbjct: 226 --GSMWGYQINGIWQDVYLLALPKIHLEDVYVKPLVSKNTLEIEVTLQNRTEKKTDVQLQ 283 Query: 219 ----VFLKVNDRKPGALPVLEAEAGAEAVPLQAGEGRQLCENADNREWQKARFVLSWPDA 274 ++ + PV G EA+ + +L A + + + Sbjct: 284 GNICEWVNCAGTDVNSAPVPNWTLGNEALKVAP---TKLSLPAKASQKVTLQVPVDKDIL 340 Query: 275 RLWSPETPNLYELELELRAGGETLDRRTGTFGFREFWCEGPQFMLNGTPVNLRGDSWHFQ 334 + W+PE PNLY L L + +T+D + FG+RE+ +G LNG P L GDSWHF Sbjct: 341 KYWTPEHPNLYALLLSVNNQKQTVDTKYERFGWREWTLQGTTQYLNGEPYALHGDSWHFM 400 Query: 335 GAAQQTEGYIRNWYRMCRQAGVNSIRLHAEPYPSDYLRIADEEGMLIVDETAIYGSSKSM 394 G Q T Y W+ + N++R HA+ YP YL +ADE G+ +++ETA + S Sbjct: 401 GIPQMTRRYAWAWFTAIKGMNANAVRPHAQVYPRFYLDMADEMGICVLNETANWASDGGP 460 Query: 395 DANHPDFIANCRAHVQRLVQRDKNHPSVILWSVQNEMRWVDGRDGYKQHIPGLMK----- 449 + F + H++R V RD+NH SV WS+ NE + V + + + K Sbjct: 461 KLDSDLFWEASKEHLKRFVLRDRNHASVFGWSISNENKPVILHVYNRPELMPVQKKAWEE 520 Query: 450 ---LMRDLDSTRP-IMVEGDNR---LLPKELTEVESRHYNIDGTISQW-DRTVPLTFGEH 501 ++ D TRP I +G++ +LP V HY ++ +W + P GEH Sbjct: 521 WRDIVHQYDPTRPWISADGEDDGDGILP-----VTVGHYGDINSMKRWIEIGKPWGIGEH 575 Query: 502 GGWWYICPQNSSMYVGLGAYRDTDASAAGLAQKERLFVEYARRQGVSGISTFNFVHYFMR 561 +Y P+ + Y G AY + GLA + + R+ G S + FN Y ++ Sbjct: 576 SMAYYGTPEQVAKYNGERAYESQEGRMEGLANECYNLIVNQRQMGASYSTVFNMAWYALK 635 Query: 562 AMP--DRDIALPPA---------DLTE--PGPKPVLIPAYSLSLNNGLLPEEYPAYRVNP 608 +P +D + P D E PG +P + Y + N G P P Y+ P Sbjct: 636 PLPLGKKDKSKAPTVEADGVFFGDYKEGVPGVQPERVGPYCTTFNPGYDP-TLPLYQEWP 694 Query: 609 SFDIMAEAFKP 619 + + A P Sbjct: 695 MYSALRAANAP 705 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 7,043,437,206 Number of extensions: 317107579 Number of successful extensions: 621105 Number of sequences better than 1.0e-05: 1503 Number of HSP's gapped: 618378 Number of HSP's successfully gapped: 1522 Length of query: 1122 Length of database: 3,060,696,203 Length adjustment: 147 Effective length of query: 975 Effective length of database: 1,675,806,998 Effective search space: 1633911823050 Effective search space used: 1633911823050 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 137 (57.4 bits)