BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0167.0016.p
         (77 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KDM5.1 B3KDM5_9BACI Glutaredoxin                                    131   2e-29
C0Z7T5.1 C0Z7T5_BREBN Putative uncharacterized protein                 87   5e-16
C2HKD9.1 C2HKD9_PEPMA NrdH family redoxin                              67   3e-10
B0S070.1 B0S070_FINM2 Glutaredoxin                                     67   5e-10
B2A8M1.1 B2A8M1_NATTJ Glutaredoxin                                     67   6e-10

>B3KDM5.1 B3KDM5_9BACI Glutaredoxin
          Length = 78

 Score =  131 bits (329), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 56/74 (75%), Positives = 69/74 (93%)

Query: 1  MENVIVYTSTNCPHCRQVKSFLSEKGISYEERNIEQNDDYAQQVWDMGMRAVPVTVIGDF 60
          MENVIVYTS NCPHC+QVK FLS++GI +EERNIEQND++AQQVWDMG+RAVP+T+IG+ 
Sbjct: 1  MENVIVYTSNNCPHCKQVKGFLSDQGIEFEERNIEQNDEFAQQVWDMGVRAVPLTIIGEH 60

Query: 61 KIVGMNKTQFDKAL 74
          +I+GMNK QF+KAL
Sbjct: 61 RILGMNKLQFNKAL 74


>C0Z7T5.1 C0Z7T5_BREBN Putative uncharacterized protein
          Length = 82

 Score = 87.0 bits (214), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 59/75 (78%)

Query: 1  MENVIVYTSTNCPHCRQVKSFLSEKGISYEERNIEQNDDYAQQVWDMGMRAVPVTVIGDF 60
          M   IVY+ST+C  C+Q+KS+L+E+ IS+EERNI++ ++Y Q++  +G+ +VP+TVIG+ 
Sbjct: 1  MAQAIVYSSTHCNFCQQLKSYLTEQNISFEERNIDEKEEYFQELSRLGVMSVPLTVIGEK 60

Query: 61 KIVGMNKTQFDKALA 75
          +I+G N T+  KALA
Sbjct: 61 QILGFNPTRIKKALA 75


>C2HKD9.1 C2HKD9_PEPMA NrdH family redoxin
          Length = 76

 Score = 67.4 bits (163), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 47/75 (62%)

Query: 1  MENVIVYTSTNCPHCRQVKSFLSEKGISYEERNIEQNDDYAQQVWDMGMRAVPVTVIGDF 60
          M++V++YTS  C +C   K ++ E  I Y E+NI Q+ +  +++   G   VPVT+IGD 
Sbjct: 1  MKDVVIYTSDGCQYCHAAKDYMDENNIKYTEKNISQDQEARKELMKKGHMGVPVTIIGDE 60

Query: 61 KIVGMNKTQFDKALA 75
          +IVG ++ +  +AL 
Sbjct: 61 EIVGFDQAKLKEALG 75


>B0S070.1 B0S070_FINM2 Glutaredoxin
          Length = 76

 Score = 67.0 bits (162), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 47/75 (62%)

Query: 1  MENVIVYTSTNCPHCRQVKSFLSEKGISYEERNIEQNDDYAQQVWDMGMRAVPVTVIGDF 60
          M++V++YTS  C +C   K ++ E  + Y E+NI Q+ +  +++   G   VPVT+IGD 
Sbjct: 1  MKDVVIYTSDGCQYCHAAKDYMDENNVKYTEKNISQDQEARKELMKKGHMGVPVTIIGDE 60

Query: 61 KIVGMNKTQFDKALA 75
          +IVG ++ +  +AL 
Sbjct: 61 EIVGFDQAKLKEALG 75


>B2A8M1.1 B2A8M1_NATTJ Glutaredoxin
          Length = 78

 Score = 66.6 bits (161), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 1/74 (1%)

Query: 2  ENVIVYTSTNCPHCRQVKSFLSEKGISYEERNIEQNDDYAQQVW-DMGMRAVPVTVIGDF 60
          E V ++T+  CP C+QVKS+L E+G+ Y E +I Q+D+  +++  + G   VP+  IGD 
Sbjct: 3  EKVELFTTPTCPACKQVKSYLEEQGVDYVEHDISQDDEARKRMAEETGQMVVPIAKIGDD 62

Query: 61 KIVGMNKTQFDKAL 74
           IVG +K ++D+ L
Sbjct: 63 YIVGFDKEEYDRLL 76


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.319    0.132    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 427,709,552
Number of extensions: 13997957
Number of successful extensions: 39854
Number of sequences better than 1.0e-05: 80
Number of HSP's gapped: 40019
Number of HSP's successfully gapped: 80
Length of query: 77
Length of database: 3,060,696,203
Length adjustment: 48
Effective length of query: 29
Effective length of database: 2,608,487,483
Effective search space: 75646137007
Effective search space used: 75646137007
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)