BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0167.0005.p (559 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D7X0.1 B1D7X0_9BACL Extracellular solute-binding protein family 1 831 0.0 B1DGY5.1 B1DGY5_9BACL Putative uncharacterized protein 700 0.0 B3KDQ5.1 B3KDQ5_9BACI Extracellular solute-binding protein family 1 629 e-178 B3KJH7.1 B3KJH7_9BACI Extracellular solute-binding protein family 1 597 e-169 Q9KBL3.1 Q9KBL3_BACHD BH1913 protein 574 e-161 >B1D7X0.1 B1D7X0_9BACL Extracellular solute-binding protein family 1 Length = 575 Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/528 (75%), Positives = 446/528 (84%), Gaps = 5/528 (0%) Query: 32 EDTSPLTMTYFSADPNPNWTGMQDEVGKVLTEKTGVTLEAEFAVGDPQQKVALIAASGEY 91 EDTSPLT+TY+S DP+PNW MQDE+GK LTEKTG+TL+AEFAVGD QK +LIAASGEY Sbjct: 53 EDTSPLTLTYYSEDPSPNWANMQDEIGKSLTEKTGITLDAEFAVGDAVQKSSLIAASGEY 112 Query: 92 PDLISAKTDISKLVDAGAMLDLTDLIDKYAPNIKKVLGEEGLKRSRYSDDDHAIYAIPTY 151 PDLISAK I+K VDAGA+LDLTDLIDKYAP++KK+ E + R RYSDDDHAIY IP+Y Sbjct: 113 PDLISAKQSIAKFVDAGAVLDLTDLIDKYAPHLKKLF-EGNMSRLRYSDDDHAIYVIPSY 171 Query: 152 AGVDNKYFDAGGGFELQHRAVKEAGYPEIKTVQDYENVIKAYLEKHPTDENGNKNIGMTL 211 G+ +YF+AGGGFELQHR VKE GYP+I+TV DYE IK YL HP DENGN NIG+TL Sbjct: 172 NGIGQQYFNAGGGFELQHRVVKELGYPQIRTVADYEKAIKDYLALHPKDENGNPNIGLTL 231 Query: 212 NADDWYMYITVTNPAFITTGSPDDGEYAIDIDTQEVTYHFRRPAEKEYFRWLNHMNDIGL 271 NADDW+MYI+VTNPAF TG DDGE+ IDIDTQ+VTYHFRRP EK+YF+WLNHMN GL Sbjct: 232 NADDWHMYISVTNPAFFATGGSDDGEFNIDIDTQKVTYHFRRPEEKDYFKWLNHMNAEGL 291 Query: 272 LDPESFVQKYDQYKAKIATGRVIGLIDQDWGYGDGEKALKAAGKLDQGYAHFPVTLSEEY 331 LDPESFVQKYDQYKAK+A+GRV+GLIDQDW YGDGEKALKAAGK DQGY H+PVT+S + Sbjct: 292 LDPESFVQKYDQYKAKVASGRVLGLIDQDWDYGDGEKALKAAGKFDQGYGHYPVTMSADV 351 Query: 332 KDTSFWPTGFMAGNGVGISVDAKDPVRAIKFLDYLASDEGQVLINWGIEGKHYNVVDGKR 391 K+ SFWPTGFM G+GV IS D DPVR IKFLDYLASDEGQVL+NWGIEGK YNVVDGKR Sbjct: 352 KEASFWPTGFMGGSGVAISKDNPDPVRTIKFLDYLASDEGQVLVNWGIEGKQYNVVDGKR 411 Query: 392 VIPEDVNNRKYNDTTNFQKETGLGNVGSSYALLSAHYGDGVLDPTGSYYTTRFPEQVTAG 451 VIPEDVNNRK ND NF KETG+G Y LLS HYGDGV DP+G+YYTT FPEQ+ AG Sbjct: 412 VIPEDVNNRKINDAVNFTKETGIG----LYNLLSGHYGDGVKDPSGNYYTTSFPEQIVAG 467 Query: 452 YNKVEKETLAAYKANTWKDLFPSEDEFKVKPWGAAWNITIPGDSEIVVLDNKLKDITWKR 511 +N VEKETL AY A TWKDLFP E+EFKVKPWGAAWNI +PGDSE VV++ KL DITWKR Sbjct: 468 FNDVEKETLKAYGATTWKDLFPKEEEFKVKPWGAAWNIPVPGDSEAVVIEKKLTDITWKR 527 Query: 512 IPEAILSKPADFDKVWDAYMGELDKAGVSKAEDLREELVKKRVKLWNE 559 IPEAIL+KP DFDK+WDAY EL KA V KAE +RE+LVK RVKLW+E Sbjct: 528 IPEAILAKPEDFDKIWDAYQQELVKANVEKAEKIREDLVKARVKLWSE 575 >B1DGY5.1 B1DGY5_9BACL Putative uncharacterized protein Length = 502 Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/507 (67%), Positives = 401/507 (79%), Gaps = 5/507 (0%) Query: 53 MQDEVGKVLTEKTGVTLEAEFAVGDPQQKVALIAASGEYPDLISAKTDISKLVDAGAMLD 112 MQD+VGK +T++TGVTL+AEFAVGDP QKVALIA SG+YPDLIS K D++K+VDAGAMLD Sbjct: 1 MQDDVGKEITKQTGVTLDAEFAVGDPSQKVALIATSGDYPDLISPKGDLNKMVDAGAMLD 60 Query: 113 LTDLIDKYAPNIKKVLGEEGLKRSRYSDDDHAIYAIPTYAGVDNKYFDAGGGFELQHRAV 172 LTDLI+KYAPN+KK+ G++ + R RYS+DD +IY IPTY+ VD + F AGGGFELQHRAV Sbjct: 61 LTDLIEKYAPNLKKLFGDQ-INRLRYSNDDPSIYVIPTYSAVDGQTFVAGGGFELQHRAV 119 Query: 173 KEAGYPEIKTVQDYENVIKAYLEKHPTDENGNKNIGMTLNADDWYMYITVTNPAFITTGS 232 KEAGYPEIKT+QDYENVIK+Y+EKHPTDENGNKNIG+TLN DDW+ YI+VTNPA TTG Sbjct: 120 KEAGYPEIKTLQDYENVIKSYIEKHPTDENGNKNIGLTLNGDDWHTYISVTNPAAETTGK 179 Query: 233 PDDGEYAIDIDTQEVTYHFRRPAEKEYFRWLNHMNDIGLLDPESFVQKYDQYKAKIATGR 292 DGEY ID T E TYH+R EKEYF WLNHM +IGLLD ESFV+K DQY AK+A+GR Sbjct: 180 SGDGEYYIDPKTNEATYHYRTEGEKEYFEWLNHMYNIGLLDKESFVEKNDQYLAKVASGR 239 Query: 293 VIGLIDQDWGYGDGEKALKAAGKLDQGYAHFPVTLSEEYKDTSFWPTGFMAGNGVGISVD 352 VIGLID DWGY DGEK+LKA KLDQ Y H+ V LS+ YKD F TGFMAG G+GI+ Sbjct: 240 VIGLIDADWGYADGEKSLKADNKLDQTYGHYSVMLSDAYKDNRFQSTGFMAGWGIGITTS 299 Query: 353 AKDPVRAIKFLDYLASDEGQVLINWGIEGKHYNVVDGKRVIPEDVNNRKYNDTTNFQKET 412 KDPVRAIKFLDYLAS++ QVL NWGIEGK Y + DGKRV+PEDV NR ND T F +E+ Sbjct: 300 CKDPVRAIKFLDYLASEQAQVLNNWGIEGKQYTLQDGKRVVPEDVQNRIINDNTAFSQES 359 Query: 413 GLGNVGSSYALLSAHYGDGVLDPTGSYYTTRFPEQVTAGYNKVEKETLAAYKANTWKDLF 472 G+G Y+ + AHYGDGV D G+YYT FPEQ+ + Y +KETL AY A TWKDLF Sbjct: 360 GVG----FYSNIGAHYGDGVKDSAGNYYTKNFPEQIVSTYTSADKETLKAYNAATWKDLF 415 Query: 473 PSEDEFKVKPWGAAWNITIPGDSEIVVLDNKLKDITWKRIPEAILSKPADFDKVWDAYMG 532 P ED+F VK WGAAWNIT+PGD E+ +L NK+KDITWK+IP +++KP DF K+WD Y Sbjct: 416 PQEDQFPVKAWGAAWNITVPGDDEVTILTNKMKDITWKQIPRIVMAKPEDFAKMWDGYQK 475 Query: 533 ELDKAGVSKAEDLREELVKKRVKLWNE 559 EL AGV K E + V+ RVKLW+E Sbjct: 476 ELLDAGVEKMEKGFTKYVQDRVKLWSE 502 >B3KDQ5.1 B3KDQ5_9BACI Extracellular solute-binding protein family 1 Length = 570 Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust. Identities = 309/527 (58%), Positives = 388/527 (73%), Gaps = 6/527 (1%) Query: 32 EDTSPLTMTYFSADPNPNWTGMQDEVGKVLTEKTGVTLEAEFAVGDPQQKVALIAASGEY 91 E P+TMTY+SAD N NW MQD VGK LTEKTG+T++AE+AV QK+ L+ ASGEY Sbjct: 49 EKLEPITMTYYSADSNANWANMQDAVGKKLTEKTGITIQAEYAVDGSNQKLPLMVASGEY 108 Query: 92 PDLISAKTDISKLVDAGAMLDLTDLIDKYAPNIKKVLGEEGLKRSRYSDDDHAIYAIPTY 151 PDL+ AK D + VD+GA +DLTDLI+++APNIKKV GE + R ++S++D AIY +PT Sbjct: 109 PDLVFAKGDANLFVDSGAFIDLTDLIEEHAPNIKKVYGEY-MSRLKWSNEDEAIYVLPTL 167 Query: 152 AGVDNKYFDAGGGFELQHRAVKEAGYPEIKTVQDYENVIKAYLEKHPTDENGNKNIGMTL 211 A VD++ DAGG F++QH +KE GYPE+KTV+DYE +K Y EKHPT + G I +TL Sbjct: 168 AAVDHQALDAGGTFQIQHEVLKELGYPELKTVKDYEKALKDYAEKHPTID-GQPTIPLTL 226 Query: 212 NADDWYMYITVTNPAFITTGSPDDGEYAIDIDTQEVTYHFRRPAEKEYFRWLNHMNDIGL 271 NAD W + I+VTNPAFI TG DDGEY ID +T E H++RP EKEYFRWLNHMN GL Sbjct: 227 NADGWRIMISVTNPAFIATGVSDDGEYYIDPETTEAKLHYKRPEEKEYFRWLNHMNAEGL 286 Query: 272 LDPESFVQKYDQYKAKIATGRVIGLIDQDWGYGDGEKALKAAGKLDQGYAHFPVTLSEEY 331 LD E+FVQK DQY+AKI++GRV+G+IDQ+WG+G+ AL+ AGK ++ YA FP+ L E Sbjct: 287 LDKETFVQKTDQYEAKISSGRVLGVIDQEWGFGNATNALRTAGKENRTYARFPIQLDEST 346 Query: 332 KDTSFWPTGFMAGNGVGISVDAKDPVRAIKFLDYLASDEGQVLINWGIEGKHYNVVDGKR 391 KD +F TG++AG GVGI+ AKDPVR IKFLDYLAS+EGQVL+NWGIEG+HYNVVDGKR Sbjct: 347 KDATFQDTGYVAGWGVGITTSAKDPVRIIKFLDYLASEEGQVLMNWGIEGEHYNVVDGKR 406 Query: 392 VIPEDVNNRKYNDTTNFQKETGLGNVGSSYALLSAHYGDGVLDPTGSYYTTRFPEQVTAG 451 VIPEDV RK D NF KETG+G Y + YGDGV D T +YYTT FPE + Sbjct: 407 VIPEDVQERKTYDNANFTKETGIG----LYNAMFPRYGDGVKDSTDNYYTTNFPETIIEN 462 Query: 452 YNKVEKETLAAYKANTWKDLFPSEDEFKVKPWGAAWNITIPGDSEIVVLDNKLKDITWKR 511 Y KETL AY A WKDL+P ++EF VKPWG A+NI +P DS I + K+++IT KR Sbjct: 463 YTPAAKETLKAYGAEMWKDLWPKQEEFDVKPWGVAYNIPVPSDSNINITYKKVEEITRKR 522 Query: 512 IPEAILSKPADFDKVWDAYMGELDKAGVSKAEDLREELVKKRVKLWN 558 IPE IL+ PA FD ++D ++ EL+ AG K E +LV++RV+LWN Sbjct: 523 IPEVILADPAKFDALYDQFIKELNDAGAEKMEQEYTQLVRERVELWN 569 >B3KJH7.1 B3KJH7_9BACI Extracellular solute-binding protein family 1 Length = 559 Score = 597 bits (1540), Expect = e-169, Method: Compositional matrix adjust. Identities = 296/527 (56%), Positives = 378/527 (71%), Gaps = 6/527 (1%) Query: 32 EDTSPLTMTYFSADPNPNWTGMQDEVGKVLTEKTGVTLEAEFAVGDPQQKVALIAASGEY 91 ED P+T+TYFSAD N NW MQD VGK LTE TGVT++AEFAV QK+ L+ ASGEY Sbjct: 38 EDLKPVTITYFSADSNANWASMQDAVGKKLTETTGVTIQAEFAVDGSNQKLPLMVASGEY 97 Query: 92 PDLISAKTDISKLVDAGAMLDLTDLIDKYAPNIKKVLGEEGLKRSRYSDDDHAIYAIPTY 151 PDL+ AK D + VD+GA +DLTDLI+++APN+KK+ G+ + R ++S++D +IY +PT Sbjct: 98 PDLVFAKGDANLFVDSGAFIDLTDLIEEHAPNLKKLYGDY-MNRLKWSNEDESIYVLPTL 156 Query: 152 AGVDNKYFDAGGGFELQHRAVKEAGYPEIKTVQDYENVIKAYLEKHPTDENGNKNIGMTL 211 VD++ DAGG F +QH +KE GYPEIKTV+D+E +K Y EKHPT + G I +TL Sbjct: 157 NAVDHQQLDAGGNFHIQHEVLKELGYPEIKTVKDFEKALKDYYEKHPTID-GQPTIPLTL 215 Query: 212 NADDWYMYITVTNPAFITTGSPDDGEYAIDIDTQEVTYHFRRPAEKEYFRWLNHMNDIGL 271 NAD W I+VT+ A I TG DGEY +D +T E H+RRP +KEYFRWLNH+N G+ Sbjct: 216 NADGWRFMISVTDAAVIATGLSGDGEYYVDPETYEAKLHYRRPEDKEYFRWLNHLNATGI 275 Query: 272 LDPESFVQKYDQYKAKIATGRVIGLIDQDWGYGDGEKALKAAGKLDQGYAHFPVTLSEEY 331 LD E+FVQK DQY+AKIA+GRV+G+ID DWG+G+ AL+ AGK ++ YA FP+ L E Sbjct: 276 LDNETFVQKTDQYEAKIASGRVLGVIDADWGFGNPTNALRTAGKENRTYARFPIQLDETT 335 Query: 332 KDTSFWPTGFMAGNGVGISVDAKDPVRAIKFLDYLASDEGQVLINWGIEGKHYNVVDGKR 391 KD SF G+ AG GVGI+ AKDPVR IKFLDYLAS+EGQ+L+NWGIEG+HYNV DGKR Sbjct: 336 KDASFQNAGYAAGWGVGITTSAKDPVRIIKFLDYLASEEGQILMNWGIEGEHYNVKDGKR 395 Query: 392 VIPEDVNNRKYNDTTNFQKETGLGNVGSSYALLSAHYGDGVLDPTGSYYTTRFPEQVTAG 451 VIPEDV +RK ND +F KE+G+G Y L YGDGV D TG+YYTT FPEQ+ A Sbjct: 396 VIPEDVQDRKVNDNASFTKESGIG----LYNSLFPRYGDGVKDSTGNYYTTNFPEQIKAN 451 Query: 452 YNKVEKETLAAYKANTWKDLFPSEDEFKVKPWGAAWNITIPGDSEIVVLDNKLKDITWKR 511 Y KETL AY A WKD +P +EF KPWGAA+ I+ P DS I + ++++I KR Sbjct: 452 YAPSAKETLQAYGAEMWKDFWPKSEEFPTKPWGAAYLISPPIDSNIAITYKRVEEIVRKR 511 Query: 512 IPEAILSKPADFDKVWDAYMGELDKAGVSKAEDLREELVKKRVKLWN 558 IPE IL+ P+ FD ++D ++ +L+ AG K E ELV+ RV+LWN Sbjct: 512 IPEIILADPSQFDALYDQFIQDLNAAGAEKMEQEYSELVRDRVELWN 558 >Q9KBL3.1 Q9KBL3_BACHD BH1913 protein Length = 551 Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust. Identities = 279/523 (53%), Positives = 380/523 (72%), Gaps = 8/523 (1%) Query: 36 PLTMTYFSADPNPNWTGMQDEVGKVLTEKTGVTLEAEFAVGDPQQKVALIAASGEYPDLI 95 P+T T FSADP+ W M+ V + + E TGVTLE EF V QK++L+AASG+YPDLI Sbjct: 37 PVTFTLFSADPHTQWDNMESSVNQKIVEATGVTLEGEFDVNGGDQKISLMAASGDYPDLI 96 Query: 96 SAKTDISKLVDAGAMLDLTDLIDKYAPNIKKVLGEEGLKRSRYSDDDHAIYAIPTYAGVD 155 K + + LVDAGA++DLTDLI+++APN+KK+ G+ R ++S +D +IY +PT A VD Sbjct: 97 WPKGNSNILVDAGALIDLTDLIEEHAPNLKKIYGDY-FDRLKWSTEDPSIYILPT-AEVD 154 Query: 156 NKYFDAGGGFELQHRAVKEAGYPEIKTVQDYENVIKAYLEKHPTDENGNKNIGMTLNADD 215 + Y++ G GF LQH VKE GYP+I+TV D+E I+ Y EK+P + +G IG++L ADD Sbjct: 155 HTYWEPGHGFMLQHDVVKELGYPDIRTVYDFEQAIRDYKEKYP-EIDGQPTIGLSLLADD 213 Query: 216 WYMYITVTNPAFITTGSPDDGEYAIDIDTQEVTYHFRRPAEKEYFRWLNHMNDIGLLDPE 275 W + I+ TNPA TG DDGEY ID DT E T H+RRP EK+YFRWLNHMND GLLDPE Sbjct: 214 WRILISTTNPALYVTGVSDDGEYYIDPDTYEATLHYRRPEEKDYFRWLNHMNDSGLLDPE 273 Query: 276 SFVQKYDQYKAKIATGRVIGLIDQDWGYGDGEKALKAAGKLDQGYAHFPVTLSEEYKDTS 335 SFVQ YDQY AKI++GRV+ ID +W G+ ++AL+ GK ++ + +P TLSEEYK + Sbjct: 274 SFVQSYDQYLAKISSGRVLAAIDANWHVGEAQRALREEGKHERMFGMYPATLSEEYKHPN 333 Query: 336 FWPTGFMAGNGVGISVDAKDPVRAIKFLDYLASDEGQVLINWGIEGKHYNVVDGKRVIPE 395 F +G++ G G+GI+VD +DPVRAIKFLD+LAS+EGQ+L NWGIEG+HY VVDG+RVIPE Sbjct: 334 FQSSGYLGGWGIGITVDCEDPVRAIKFLDFLASEEGQILQNWGIEGEHYEVVDGERVIPE 393 Query: 396 DVNNRKYNDTTNFQKETGLGNVGSSYALLSAHYGDGVLDPTGSYYTTRFPEQVTAGYNKV 455 + +R+ N++ N+ ++TG+G + + YGDG+ D TG YT P+Q+ Y V Sbjct: 394 EEMDRR-NNSANYVRDTGIGVLKG----FAPSYGDGMTDSTGQTYTIVSPDQIIEAYTDV 448 Query: 456 EKETLAAYKANTWKDLFPSEDEFKVKPWGAAWNITIPGDSEIVVLDNKLKDITWKRIPEA 515 EKE LA Y WKDL+P+++EF VKPWGA WNIT+ S++ +++ + +DI KR+PEA Sbjct: 449 EKEVLANYGVEMWKDLYPAKEEFPVKPWGAGWNITVESGSQLELINQRCRDIMKKRVPEA 508 Query: 516 ILSKPADFDKVWDAYMGELDKAGVSKAEDLREELVKKRVKLWN 558 IL+ P DFD +WDA+M +L++AGV +AE ELV++RV+LWN Sbjct: 509 ILASPEDFDDIWDAFMNDLEQAGVEEAEKAFTELVQERVELWN 551 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.135 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,580,771,117 Number of extensions: 170214642 Number of successful extensions: 291936 Number of sequences better than 1.0e-05: 178 Number of HSP's gapped: 291693 Number of HSP's successfully gapped: 179 Length of query: 559 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 418 Effective length of database: 1,732,333,088 Effective search space: 724115230784 Effective search space used: 724115230784 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)