BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0166.0002.p (1064 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q2BA77.1 Q2BA77_9BACI Sensor protein EC=2.7.13.3 445 e-122 B7GID8.1 B7GID8_ANOFW Sensor protein EC=2.7.13.3 437 e-120 A6CTQ2.1 A6CTQ2_9BACI Sensor protein EC=2.7.13.3 409 e-112 C0Z5E9.1 C0Z5E9_BREBN Two-component hybrid sensor and regulator ... 404 e-110 C3J5Z3.1 C3J5Z3_9BACI Histidine kinase EC=2.7.13.3 319 1e-84 >Q2BA77.1 Q2BA77_9BACI Sensor protein EC=2.7.13.3 Length = 956 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 255/680 (37%), Positives = 402/680 (59%), Gaps = 14/680 (2%) Query: 389 LKSAQQQLAVTLRNTEQTTVMLERYNQLNHELTYTLDKQEFAGKFSRFMNQIYAFDSSLF 448 L++ Q +L L + + L+R N L + ++ +LD Q M I + D + Sbjct: 281 LQAQQTELEEMLEALRENELKLKRRNDLTNGISSSLDLQSILDSIVVNMCGIISADRGMI 340 Query: 449 FLVKDKIAVVKGVPQEKVEQYXXXXXX-XXXXXXKEEKSYIVKRTGSPREQGISPDEVLC 507 L+ K A + VEQ+ + +KS+ +KR E+G + Sbjct: 341 GLLNTKAAAAYAISASGVEQFMDHIENGLHERLIQSKKSFAIKRELLAGEKGYHEEVSYS 400 Query: 508 YDFYTSVVGGNDEILAVFCGSRIGHAFTEEEISEIQGLASRVALAIERIMMYEEIEHGRK 567 YD Y V+ DE++AV SR G F+E+++ E + L+ +V ++++ I +Y + E RK Sbjct: 401 YDLYLPVISSKDEVIAVMLFSRFGSPFSEKQMDEYEALSRQVGISLDNISLYSQSEEERK 460 Query: 568 LNQDIVNNVNEGIQFVNTEGVMQHINKALSQLFHYEWAEGSL--IPAEAWLDAFTGKSNE 625 LN+DI+N V EGIQ V+ G + N+ L ++F A G L +P E W K + Sbjct: 461 LNKDILNTVQEGIQMVSRSGAILQANRQLEEMFTCPGAAGRLENLPWEIWSAEMANKVEQ 520 Query: 626 SAELRSFYENAIAESALDSSTMKYSLGKEEIQHVDVYAIPVLRREDRIGTLFVHRDITRE 685 E +F +NA+ + + ++ Y + K+ Q + +Y + + ++RIGT+ VHRDIT+E Sbjct: 521 PDEFLAFLQNAVHSDSCEMESIIYQM-KQTGQVIKMYCEGLGQEDERIGTVLVHRDITKE 579 Query: 686 YELDVMKSELVSTVSHELRTPLSSVLGFTELLLSKTMKPEKQLKYLETIHKEAKRLTELI 745 +E+D MKSE VSTVSHELRTPL+S+LGFTEL+L++ +KP+KQ KYL TI+ EA+RLT LI Sbjct: 580 FEVDQMKSEFVSTVSHELRTPLASILGFTELMLNRELKPDKQKKYLTTIYNEARRLTSLI 639 Query: 746 NDFLDLQRMESGTQQYNVEPAHLSEIVLGVIDQYKLSS-THHILFEDEAVHDEVAV-DRD 803 NDFLD+QRME+G Q Y + L I+ VI++ ++++ H I +D ++ ++V + D+ Sbjct: 640 NDFLDVQRMEAGKQTYEKKYLRLLPIIEQVIEKQQINTDIHKIKIDDRSIGNDVILGDKS 699 Query: 804 KIVQVLTNLLSNAIKFSPGSHEVKVMLHNEPGRILVRIQDQGLGIPKNQIGQLFQKFRRV 863 K+ QV TNL+SNA+K+SPG ++ + L+ E +L ++D+GLGIP++ + +LF KF RV Sbjct: 700 KVEQVFTNLISNAVKYSPGGGDIIIRLYQEDKSVLAEVEDKGLGIPEDALDKLFTKFYRV 759 Query: 864 DNSASKRIGGTGLGLAICKEIIEKHKGTIGIDSVEGEGSTVWFSLP-VQVAEESRPVEEM 922 DNS +RIGGTGLGL+I +EI++ H G+I + S G+GS S P ++ AEE + + Sbjct: 760 DNSDRRRIGGTGLGLSIVQEIMKAHSGSISVASSYGKGSIFTLSFPLIETAEEPGAI-SV 818 Query: 923 SKWGADKEQKPSVMIVEDDYXXXXXXXXXXKGKGFRVTHHYHPQKAFD-QALKSPFVAIV 981 K A+ + VM+VEDD GF+V H+ Q+A D AL +P AIV Sbjct: 819 PKASAEGYR---VMVVEDDQSLAELIIQELSDSGFQVVHYKRGQEALDFLALHTP-DAIV 874 Query: 982 VDLMLGVE-LDGWDLIRMLKNDPRTEKVPIVISSALDQTDKSLLENVKTYLTKPYPPGEL 1040 +D+ML E +DGW ++ +K + R + +PI++S+ALD+ +K YL KPY P +L Sbjct: 875 LDIMLEEEQVDGWRIMEQIKENDRLKNIPIIVSTALDEKEKGFSLGANDYLVKPYKPSQL 934 Query: 1041 SKTLQEIVEIKLKSGEVLFP 1060 S+ + + + K G++L P Sbjct: 935 SRAIMQTLLKIGKVGQILIP 954 Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 3/223 (1%) Query: 27 EREVLQTKAHTIDRLAGALNEVFFRARGYVALKNSNELSLLNTALENLDGILDQYSTLNL 86 +R L K + + N VFF RGY+A N + + L + Q L Sbjct: 47 KRAELVKKEALVQEIDSTFNRVFFDVRGYLAFDNDDMRISAQSKQPELRKMGKQLDELAA 106 Query: 87 SAEEAEYRDALSAFYTNYKSKTLPKAIQLVESDDYEGIRTLSQSGSTQALNDFLAYTKAF 146 S ++ Y + F Y + LP + E+ E ++ L+ +G+T +N F + + Sbjct: 107 SQDDKAYAREVREFIDYYFIEKLPATVNYFETGRIEEVKRLASTGATARVNTFQDDSLKY 166 Query: 147 KDNSDKQLSEMADRSIRKADGYTVAAFGISAFLLLFFTLMIWR-MLKVLIDPIVRLEEAT 205 + QL+E A+ + K Y F + +F++L I R M + + P+ A Sbjct: 167 LQGINDQLNEEAEGLMEK-QSYIQMGFVLFSFVILVLLARITRVMFRRVGQPLADFAAAA 225 Query: 206 HSLAAG-EAVLLGRLHKQDEIGRLYEAFLNMAHSIQDKEEELT 247 + +AAG EAV+ ++DE+G L AF M S+QDKE++LT Sbjct: 226 NEIAAGREAVITVESSREDELGALSVAFQKMVWSVQDKEQDLT 268 >B7GID8.1 B7GID8_ANOFW Sensor protein EC=2.7.13.3 Length = 962 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 254/659 (38%), Positives = 380/659 (57%), Gaps = 9/659 (1%) Query: 410 LERYNQLNHELTYTLDKQEFAGKFSRFMNQIYAFDSSLFFLVK-DKIAVVKGVPQEKVEQ 468 L+RYN L+ +LD+QE + ++ D + L+ +K G+ VEQ Sbjct: 305 LKRYNDFIQGLSNSLDRQEVLNNIVHNIARVMEADRGMIVLMNAEKTHASFGLSASGVEQ 364 Query: 469 YXXXXXXXXXXXXKEEKS-YIVKRTGSPREQGISPDEVLCYDFYTSVVGGNDEILAVFCG 527 + E+K +++KR + E+G + + +D + V+ +++ A+ Sbjct: 365 FLTYIYNGLHQRLFEQKKPFMLKRELTASEKGYHEETMFVHDVFLPVLSNENDVQAILVF 424 Query: 528 SRIGHAFTEEEISEIQGLASRVALAIERIMMYEEIEHGRKLNQDIVNNVNEGIQFVNTEG 587 SR G F++E++ E GL ++++++++I +YE+ E R+ Q I+N V EGI FV+++G Sbjct: 425 SRFGGPFSDEDMQEYVGLTKQISISLQKIALYEQSEQARETVQHILNTVQEGIHFVDSKG 484 Query: 588 VMQHINKALSQLFHYEW-AEGSLIPAEAWLDAFTGKSNESAELRSFYENAIAESALDSST 646 +NK + L E AE E W +S+ +L + I D Sbjct: 485 HSVMVNKQMVALLQKETIAELEGASYEQWARGLVEQSDAGKKLCDYLRAIIFNGDEDVEP 544 Query: 647 MKYSLGKEEIQHVDVYAIPVLRREDRIGTLFVHRDITREYELDVMKSELVSTVSHELRTP 706 Y L ++ + + VYA P+ R +R GT+FVHRDIT+++E+D MKSE VSTVSHELRTP Sbjct: 545 FVYHLPQKR-KVIQVYAKPLYRNGERQGTVFVHRDITKQFEVDQMKSEFVSTVSHELRTP 603 Query: 707 LSSVLGFTELLLSKTMKPEKQLKYLETIHKEAKRLTELINDFLDLQRMESGTQQYNVEPA 766 LSSVLGFTEL+L+K +KPE+Q KYL TI++EAKRLT LINDFLD+QRMESG Q Y+ + Sbjct: 604 LSSVLGFTELMLTKELKPERQKKYLTTIYQEAKRLTALINDFLDVQRMESGKQTYDKKYE 663 Query: 767 HLSEIVLGVIDQYKLSST-HHILFEDEAVHDEVAVDRDKIVQVLTNLLSNAIKFSPGSHE 825 + I+ VI+ K+++ H + E + V DRDK+ QV TNL+SNAIK+SP Sbjct: 664 DIVSIIENVIETQKVNTKIHQFHVQKETNNTTVLGDRDKLAQVFTNLISNAIKYSPEGGN 723 Query: 826 VKVMLHNEPGRILVRIQDQGLGIPKNQIGQLFQKFRRVDNSASKRIGGTGLGLAICKEII 885 + V ++ R+ V +QD+GLGIP+ I LF KF RVDNS +RIGGTGLGLAI KEI+ Sbjct: 724 ITVRIYERGTRLCVDVQDEGLGIPEEAIPNLFTKFYRVDNSDRRRIGGTGLGLAIVKEIV 783 Query: 886 EKHKGTIGIDSVEGEGSTVWFSLPVQVAEESRPVEEMSKWGADKEQKPSVMIVEDDYXXX 945 + H+G + + S +GST SLP+ V EE + DK V+IVEDD Sbjct: 784 KAHEGEVSVTSELKKGSTFTVSLPLVVLASE---EEGERDNNDKHAHAHVIIVEDDEHLA 840 Query: 946 XXXXXXXKGKGFRVTHHYHPQKAFDQALKSPFVAIVVDLML-GVELDGWDLIRMLKNDPR 1004 K GFRV H ++A K A+V+D+ML + GWD+++ LK + + Sbjct: 841 ALLEAELKDSGFRVKHVKEGKEAIALIEKEKPDAVVLDIMLEKQDTSGWDVLKALKQNEQ 900 Query: 1005 TEKVPIVISSALDQTDKSLLENVKTYLTKPYPPGELSKTLQEIVEIKLKSGEVLFPGND 1063 +PI+ISSAL++ +K + +YL KPY P +LSKT+ +++ K + GE+ P N+ Sbjct: 901 LSDIPIIISSALEEREKGMALGATSYLVKPYQPSQLSKTILQMLLNKERQGEIFVPLNE 959 Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 7/236 (2%) Query: 16 YINSQQSKLKAEREVLQTKAHTIDRLAGALNEVFFRARGYVALKNSNELSL-LNTALENL 74 Y ++ + + ++E ++TK + A N+ F ARGY+A N E L + EN Sbjct: 37 YQSTLTASFEQKKEQIETKMKYAQEIERAFNQAFSDARGYLAF-NRKEFKLSIFRQQENA 95 Query: 75 DGILDQYSTLNLSAEEAEYRDALSAFYTNYKSKTLPKAIQLVESDDYEGIRTLSQSGSTQ 134 LD + ++ ++ F + Y +P+AI+ E+ + E + +LS++G T Sbjct: 96 QTALDALELAATTKDDTQFILKARQFASYYFGNLVPQAIEAFENGNIEKVMSLSENGGTA 155 Query: 135 ALNDFLAYTKAFKDNSDKQL-SEMADRSIRKADGYTVAAFGISAFLLLFFTLMIWRMLKV 193 ++ F K +K+ +QL +E + TV I+ L + T+ M K+ Sbjct: 156 SIEQFQLQMKTYKNKLTEQLDAEFQQLRDHQTTAQTVFILFIATILAILITIARIMMRKI 215 Query: 194 LIDPIVRLEEATHSLAAGEAVLLG---RLHKQDEIGRLYEAFLNMAHSIQDKEEEL 246 P+ L + +A E V+ +++DEIG+L AF M SIQ+KEE L Sbjct: 216 G-RPLNELAKVAEKIANDEQVVYDVREATNREDEIGKLANAFQKMLTSIQEKEESL 270 >A6CTQ2.1 A6CTQ2_9BACI Sensor protein EC=2.7.13.3 Length = 941 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/641 (36%), Positives = 371/641 (57%), Gaps = 16/641 (2%) Query: 410 LERYNQLNHELTYTLDKQEFAGKFSRFMNQIYAFDSSLFFLVKDKIAVVK-GVPQEKVEQ 468 L +N+L + L+ +LDKQE + + + D + ++ + K GV Q V+Q Sbjct: 301 LRHHNELINSLSNSLDKQEVLNSIVKGFSGVLRADKGIIVILDSEKTYAKWGVSQVGVQQ 360 Query: 469 YXXXXXXXXXXXXKEEK-SYIVKRTGSPREQGISPDEVLCYDFYTSVVGGNDEILAVFCG 527 + +EE+ +++KR E+GI ++ C+D Y V+ + + AV Sbjct: 361 FISHLDNGTLERLQEEQHPHVIKRRLPREEKGIHNEDQPCWDLYLPVLSPSGNVEAVMVY 420 Query: 528 SRIGHAFTEEEISEIQGLASRVALAIERIMMYEEIEHGRKLNQDIVNNVNEGIQFVNTEG 587 SR ++ EE+ E L+ +V++++E+I ++E E R +N DI+N ++EGIQ ++T G Sbjct: 421 SRFSGGYSAEEMQEYSSLSKQVSISLEKIKVFESSEADRMMNNDILNTIHEGIQLLDTNG 480 Query: 588 VMQHINKALSQLFHY----EWAEGSLIPAEAWLDAFTGKSNESAELRSFYENAIAESALD 643 + HIN+ S ++ ++ + S + W + + E EL +F + Sbjct: 481 KIIHINETFSSIYQSDHLNQYIDKSFL---EWFNDVSDIVEEPVELYNFANELLTNEINA 537 Query: 644 SSTMKYSLGKEEIQHVDVYAIPVLRREDRIGTLFVHRDITREYELDVMKSELVSTVSHEL 703 + +Y L + + + VYA P+ R E G + VHRD T+EYE D MK+ELVSTVSHEL Sbjct: 538 PNQAQYKLINGQPRMIQVYAEPLYRNETLTGWILVHRDFTKEYEADQMKNELVSTVSHEL 597 Query: 704 RTPLSSVLGFTELLLSKTMKPEKQLKYLETIHKEAKRLTELINDFLDLQRMESGTQQYNV 763 RTPL+SVLG+TELL+++ +KPE+Q KYL TI++EA RLT LINDFLD+QRMESG Q Y Sbjct: 598 RTPLASVLGYTELLINRELKPERQKKYLNTIYQEANRLTVLINDFLDVQRMESGKQTYEK 657 Query: 764 EPAHLSEIVLGVIDQYKL-SSTHHILFEDEAVHDEVAVDRDKIVQVLTNLLSNAIKFSPG 822 + L+ ++ VI+ K+ +S H I F +A D V DRDK++QV NL+ NA+K+SP Sbjct: 658 KYESLTPLLKEVIEGIKINTSIHDIQFVSDADDDMVLGDRDKLLQVFQNLIQNAVKYSPA 717 Query: 823 SHEVKVMLHNEPGRILVRIQDQGLGIPKNQIGQLFQKFRRVDNSASKRIGGTGLGLAICK 882 + + LH+ P + V I D+GLG+P+ + LF KF RVDNS ++IGGTGLGLAI K Sbjct: 718 GGNITIKLHSAPKELHVSIIDEGLGVPEEAMPNLFTKFFRVDNSDRRKIGGTGLGLAIAK 777 Query: 883 EIIEKHKGTIGIDSVEGEGSTVWFSLPVQVAEESRPVEEMSKWGADKEQKPSVMIVEDDY 942 EII+ H+G I + S G+GST LP + + + E++ + + ++IVEDD Sbjct: 778 EIIKAHEGDIVLSSKLGQGSTFTVILP-----KVKGIAEITTESYSGKGRGKIVIVEDDK 832 Query: 943 XXXXXXXXXXKGKGFRVTHHYHPQKAFDQALKSPFVAIVVDLMLGV-ELDGWDLIRMLKN 1001 GF +T + ++A K+P AI++D+ML + +DG D+++ +KN Sbjct: 833 QLASLLSNELTESGFFITTFSNGEEALAYVEKNPPDAIILDIMLSMSNMDGLDVLQTVKN 892 Query: 1002 DPRTEKVPIVISSALDQTDKSLLENVKTYLTKPYPPGELSK 1042 + +P+ +S+ALD+ +K L + +L KPY P +L++ Sbjct: 893 HSELKDIPVFVSTALDEKEKVLKLGAEGFLVKPYSPSKLTE 933 >C0Z5E9.1 C0Z5E9_BREBN Two-component hybrid sensor and regulator EC=2.7.3.- Length = 962 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 242/680 (35%), Positives = 372/680 (54%), Gaps = 9/680 (1%) Query: 389 LKSAQQQLAVTLRNTEQTTVMLERYNQLNHELTYTLDKQEFAGKFSRFMNQIYAFDSSLF 448 L Q++L L E+ LE+ N+ L+ TLDK E R + ++ D + Sbjct: 281 LMMQQEELQEALGKMEENERYLEKKNRFILSLSNTLDKSELLSSIIRNITEVMDADKGVI 340 Query: 449 FLVK-DKIAVVKGVPQEKVEQYXXXXXXXXXXXXKEEK-SYIVKRTGSPREQGISPDEVL 506 ++ D+ A GV Q +EQ +E Y++ R + E+G + ++ Sbjct: 341 VMLNTDRDAASFGVSQNGLEQLRKGLDDGPFVRIRETGLPYVLMRESTDAERGYTEEKSQ 400 Query: 507 CYDFYTSVVGGNDEILAVFCGSRIGHAFTEEEISEIQGLASRVALAIERIMMYEEIEHGR 566 ++ Y V+ I+A SRIG FT +E+ I G+A +++LA++++ MYEE E R Sbjct: 401 TFELYLPVLDAQQTIVACIICSRIGRKFTNQELRVIIGIAKQISLALDKLEMYEETERQR 460 Query: 567 KLNQDIVNNVNEGIQFVNTEGVMQHINKALSQLFHYEWAEGSL-IPAEAWLDAFTGKSNE 625 K+ QD++++V EGIQ ++ G +N +L Y+ S E +L +++E Sbjct: 461 KMTQDMLDSVQEGIQLIDLSGETLQVNWNFCELLCYDHQLASQGFDLEQFLSHLQSRTSE 520 Query: 626 SAELRSFYENAIA-ESALDSSTMKYSLGKEEIQHVDVYAIPVLRREDRIGTLFVHRDITR 684 L + + + E A+ S ++ + + +I+++ +YA P+ R +++ TL V+RD T+ Sbjct: 521 PDRLIQYVRSVVLDEGAIPSGSIVFEMTGPQIRYIQLYAEPLYRNQEKWSTLLVYRDFTK 580 Query: 685 EYELDVMKSELVSTVSHELRTPLSSVLGFTELLLSKTMKPEKQLKYLETIHKEAKRLTEL 744 EYE+D MKSE VSTVSHELRTPL+SVLGF ELLL+K +KPE+Q +Y+ TI++EA RLT L Sbjct: 581 EYEIDQMKSEFVSTVSHELRTPLASVLGFAELLLTKKLKPERQQRYIATIYQEATRLTAL 640 Query: 745 INDFLDLQRMESGTQQYNVEPAHLSEIVLGVIDQYKLSSTHHILFEDEAVHDEVAV--DR 802 INDFLDLQRMESG Q Y +E + +++ + + +++ S H FE + ++ V D+ Sbjct: 641 INDFLDLQRMESGRQTYELENVAIDQVIRDIFELHRVQSPLH-RFELDLQTEKTVVSGDQ 699 Query: 803 DKIVQVLTNLLSNAIKFSPGSHEVKVMLHNEPGRILVRIQDQGLGIPKNQIGQLFQKFRR 862 K+ QV NL+SNA+K+SP V+V + R+LV +QD+GLGIP I LF KF R Sbjct: 700 AKLHQVFLNLISNAVKYSPHGGHVRVGCRQDGNRLLVEVQDEGLGIPSEAIPHLFTKFYR 759 Query: 863 VDNSASKRIGGTGLGLAICKEIIEKHKGTIGIDSVEGEGSTVWFSLPVQVAEESR--PVE 920 VDNS + IGGTGLGLAI +EI+ H G + + S G+GST +LP+ + S P Sbjct: 760 VDNSDRREIGGTGLGLAIVQEIVHMHHGEVSVISESGKGSTFTVTLPLAEHDLSPGYPAG 819 Query: 921 EMSKWGADKEQKPSVMIVEDDYXXXXXXXXXXKGKGFRVTHHYHPQKAFDQALKSPFVAI 980 + K +V+IVEDD GF V +A + A+ Sbjct: 820 SEEAISPTGQCKGNVVIVEDDLNLTELLRHELTCSGFSVNSFSTAYEAVAAIEELRPDAV 879 Query: 981 VVDLMLGVELDGWDLIRMLKNDPRTEKVPIVISSALDQTDKSLLENVKTYLTKPYPPGEL 1040 V+DL L GW +I ++N+P +PIVISSA ++ K+ YL KPY P L Sbjct: 880 VLDLNLKDGESGWKVIEEIRNNPDLRTIPIVISSAFEEKKKAFDLGATGYLIKPYHPDTL 939 Query: 1041 SKTLQEIVEIKLKSGEVLFP 1060 SK + + +G++ P Sbjct: 940 SKAILLAITNHEATGQIFIP 959 Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 103/213 (48%) Query: 34 KAHTIDRLAGALNEVFFRARGYVALKNSNELSLLNTALENLDGILDQYSTLNLSAEEAEY 93 K + + +A N++FFRARGY A + +E + L + L+ L+++ L L+ EE Sbjct: 55 KQNLVADIAEHTNQIFFRARGYYAFLSPSEYNELFLEKKKLEQALEKFKKLPLNDEEQTL 114 Query: 94 RDALSAFYTNYKSKTLPKAIQLVESDDYEGIRTLSQSGSTQALNDFLAYTKAFKDNSDKQ 153 ++ +F+TN+ + P ++ D+E +R S SG Q +N+ L Y +++ D+ Sbjct: 115 VASIESFFTNFFANVFPTFSSYAKNGDFESLRKASASGVNQEVNNLLTYAGRYQEEHDQL 174 Query: 154 LSEMADRSIRKADGYTVAAFGISAFLLLFFTLMIWRMLKVLIDPIVRLEEATHSLAAGEA 213 L + + S +L+ ++ + + + P+VRL + A G Sbjct: 175 LYTKNQLLFEEMSQISTWFLVYSLMVLVIMVIVTIQTTRDIGRPLVRLSQNAEQFANGRT 234 Query: 214 VLLGRLHKQDEIGRLYEAFLNMAHSIQDKEEEL 246 LL L++ DEIGRL + + IQ KEE L Sbjct: 235 PLLQDLNRIDEIGRLSRSLDYLIRQIQAKEEVL 267 >C3J5Z3.1 C3J5Z3_9BACI Histidine kinase EC=2.7.13.3 Length = 470 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 172/418 (41%), Positives = 255/418 (61%), Gaps = 8/418 (1%) Query: 497 EQGISPDEVLCYDFYTSVVGGNDEILAVFCGSRIGHAFTEEEISEIQGLASRVALAIERI 556 E+G + +D + V+ +D+I A+ SR+G AFT+EE +E + L ++++++++ Sbjct: 49 ERGYHDGPLYSHDLFVPVLSPSDDIEAIIVLSRLGAAFTDEEAAEAEQLGRHISISLQKL 108 Query: 557 MMYEEIEHGRKLNQDIVNNVNEGIQFVNTEGVMQHINKALSQLFHYE---WAEGSLIPAE 613 +YEE E R+L ++I N+++EGIQ V+ +G + +N + + F W E +P Sbjct: 109 ALYEEAEKDRRLAEEIFNHLHEGIQLVDLQGTNKLMNGRMKEWFGAAANGWHE---MPYA 165 Query: 614 AWLDAFTGKSNESAELRSFYENAIAESALDSSTMKYSLGKEEIQHVDVYAIPVLRREDRI 673 W + L +F + A+ A + S M Y L KE+ ++VYA P+ R + Sbjct: 166 EWKQQLCALVVDGRPLGAFLDQAVFGPADELSVMTYEL-KEKRAVMEVYAAPLYRGGAKF 224 Query: 674 GTLFVHRDITREYELDVMKSELVSTVSHELRTPLSSVLGFTELLLSKTMKPEKQLKYLET 733 GT+FVHRDIT++ E+D MKSELVSTVSHELRTPL+ +LG ELLL+K + PE+Q KYL Sbjct: 225 GTIFVHRDITKQAEVDRMKSELVSTVSHELRTPLAGILGLAELLLNKPLAPERQRKYLTA 284 Query: 734 IHKEAKRLTELINDFLDLQRMESGTQQYNVEPAHLSEIVLGVIDQYKLSSTHHIL-FEDE 792 I +EA+RL LINDFLD+QRME+G Q Y EP L I+ +ID K+ + H E Sbjct: 285 IGQEAERLMALINDFLDVQRMEAGRQTYRWEPVDLVPIMEKIIDAEKMGTDIHTFSVSVE 344 Query: 793 AVHDEVAVDRDKIVQVLTNLLSNAIKFSPGSHEVKVMLHNEPGRILVRIQDQGLGIPKNQ 852 + DR+++ Q+ TNL+ NA+K+SP V + L+ G + V +QD+GLGIP Sbjct: 345 TKRTMIRGDRERLRQLFTNLVHNAVKYSPNGGAVVIRLYEHSGCLCVDVQDEGLGIPAEA 404 Query: 853 IGQLFQKFRRVDNSASKRIGGTGLGLAICKEIIEKHKGTIGIDSVEGEGSTVWFSLPV 910 + +F+KF RVDNS +RIGGTGLGL I KEI + H G + + S E +GST P+ Sbjct: 405 LPHIFEKFFRVDNSDRRRIGGTGLGLTIVKEIAKAHGGEVTVVSEEKKGSTFTVRFPL 462 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.133 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 5,598,107,967 Number of extensions: 223082260 Number of successful extensions: 805558 Number of sequences better than 1.0e-05: 31448 Number of HSP's gapped: 748680 Number of HSP's successfully gapped: 31753 Length of query: 1064 Length of database: 3,060,696,203 Length adjustment: 146 Effective length of query: 918 Effective length of database: 1,685,228,013 Effective search space: 1547039315934 Effective search space used: 1547039315934 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 137 (57.4 bits)