BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0165.0008.p (326 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DA21.1 B1DA21_9BACL Putative uncharacterized protein 430 e-119 A8MKA5.1 A8MKA5_ALKOO Putative uncharacterized protein 283 2e-74 A7FV71.1 A7FV71_CLOB1 Putative membrane protein 260 1e-67 A5I3D8.1 A5I3D8_CLOBH Putative membrane protein 260 1e-67 C1FPR7.1 C1FPR7_CLOBJ Putative membrane protein 258 8e-67 >B1DA21.1 B1DA21_9BACL Putative uncharacterized protein Length = 320 Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust. Identities = 224/317 (70%), Positives = 263/317 (82%) Query: 10 MQQQGLKLAYIFAVLNAVIIGFSFLFTKVALGHAGPLDTLTYRFAASFVVMSVPVAFGWV 69 M + ++L Y AVLNAVIIG SFLF K AL +A PLDTL +RF +SF+VMS+PV FGW+ Sbjct: 1 MGHKEMRLPYFLAVLNAVIIGLSFLFAKTALDYASPLDTLAFRFTSSFLVMSIPVLFGWI 60 Query: 70 KVSYRGKPIGRALLLAAMYPLGFFTLQVFGLQHATSAEGGILYSFTPVVTMIIASVFLKE 129 K+SYRGKP+ + LLLA+MYPLGFFTLQ +GLQHA SAEGGILY+FTPVVTMIIAS+FLKE Sbjct: 61 KLSYRGKPLRKVLLLASMYPLGFFTLQGYGLQHANSAEGGILYAFTPVVTMIIASMFLKE 120 Query: 130 TTTLLQKLCIFLSVFGVVFIFVMKGSSIQLSNMTGIVLLFLTCLAFAGYSVLARSLSRHF 189 TTT+LQKL IFLSVFGVVFIFVMKGSSI LSN+ GI LL LTC AFAGY+VLARSLSR F Sbjct: 121 TTTVLQKLSIFLSVFGVVFIFVMKGSSIDLSNLLGISLLLLTCFAFAGYTVLARSLSRQF 180 Query: 190 SPAELSYLLMGIGFATFLILSLTGHAASGTLGGFLSPLKSGTFILSAVYLGVIASLVTTL 249 SPAE++YL+MGIGF F + SLT HA++GTL +PL SGTFI S ++LG+++SL+T L Sbjct: 181 SPAEITYLMMGIGFVFFTVTSLTSHASAGTLSHIFAPLASGTFIASLIFLGIVSSLLTAL 240 Query: 250 TSTYILSKIEASLMSVFSNLSTIVSIAAGALFLGEEITVYHWIGSFLIIAGVIGTNRLGR 309 TS YILSK+EAS MSVF+NLSTIVS+ AGA+FLGEEIT+YH IGS LIIAGVIGTNRLGR Sbjct: 241 TSNYILSKMEASKMSVFANLSTIVSMTAGAVFLGEEITIYHLIGSVLIIAGVIGTNRLGR 300 Query: 310 KKTEARPGGDRTVPVSR 326 KKT + V+ Sbjct: 301 KKTAGHENSQKLNAVNH 317 >A8MKA5.1 A8MKA5_ALKOO Putative uncharacterized protein Length = 307 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 158/304 (51%), Positives = 207/304 (68%) Query: 7 DAPMQQQGLKLAYIFAVLNAVIIGFSFLFTKVALGHAGPLDTLTYRFAASFVVMSVPVAF 66 + + ++ Y A L AVI G SFLF K+ L PLD L YRF ASFV + +P F Sbjct: 2 EENTKNDNKRMVYGAATLYAVITGLSFLFGKIGLQSTSPLDLLAYRFTASFVGILIPTLF 61 Query: 67 GWVKVSYRGKPIGRALLLAAMYPLGFFTLQVFGLQHATSAEGGILYSFTPVVTMIIASVF 126 WV + Y + I + L LA +YPL FF Q FGLQ+A+S+E GIL + PV T+I+A+ F Sbjct: 62 KWVPLDYNKEKILKILPLALLYPLLFFGFQTFGLQYASSSEAGILLAAAPVFTLILATYF 121 Query: 127 LKETTTLLQKLCIFLSVFGVVFIFVMKGSSIQLSNMTGIVLLFLTCLAFAGYSVLARSLS 186 LKE TT LQKL I +SV GV++I KGSS + +N+ GIV L L+ L+F+GYSV+AR L+ Sbjct: 122 LKEKTTFLQKLSILISVLGVIYITAKKGSSFEFNNVKGIVFLVLSALSFSGYSVMARGLT 181 Query: 187 RHFSPAELSYLLMGIGFATFLILSLTGHAASGTLGGFLSPLKSGTFILSAVYLGVIASLV 246 + FS ELSY++ I F F SL H +GTL +L PLK +FIL+ +YLG+++SLV Sbjct: 182 KDFSSVELSYMMTIISFICFNTASLGKHLINGTLSAYLIPLKDFSFILAILYLGILSSLV 241 Query: 247 TTLTSTYILSKIEASLMSVFSNLSTIVSIAAGALFLGEEITVYHWIGSFLIIAGVIGTNR 306 T+L + Y+LSKIEAS MSVFSNL T++SI AG +FL EEI YH IGS LI+ GV+GTN Sbjct: 242 TSLLTNYVLSKIEASKMSVFSNLGTVISIVAGVIFLKEEIFYYHIIGSILIVGGVVGTNF 301 Query: 307 LGRK 310 L +K Sbjct: 302 LYKK 305 >A7FV71.1 A7FV71_CLOB1 Putative membrane protein Length = 302 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 145/301 (48%), Positives = 205/301 (68%), Gaps = 1/301 (0%) Query: 10 MQQQGLKLAYIFAVLNAVIIGFSFLFTKVALGHAGPLDTLTYRFAASFVVMSVPVAFGWV 69 M+ K AY+ A+L ++IIGFSFLF+K++L A PLDTL YRF SF+ V V GW+ Sbjct: 1 MKFSHKKKAYVSAILYSIIIGFSFLFSKISLTFADPLDTLAYRFTVSFIFAFVSVLLGWI 60 Query: 70 KVSYRGKPIGRALLLAAMYPLGFFTLQVFGLQHATSAEGGILYSFTPVVTMIIASVFLKE 129 K+ K I L L+ YP+ FF Q+FGL + S+E GI+ + P+ TMI + +FLKE Sbjct: 61 KLDITKKDILSILPLSLFYPIMFFGFQIFGLVYIASSEAGIIQATIPIFTMIFSIIFLKE 120 Query: 130 TTTLLQKLCIFLSVFGVVFIFVMKGSSIQLSNMTGIVLLFLTCLAFAGYSVLARSLSRHF 189 ++LQKL I LSV GVV+IF MKG +++ + GIVL+ L+ L+ +G +VLAR +S + Sbjct: 121 RPSILQKLSILLSVAGVVYIFFMKGVNLKSNIFIGIVLILLSALSSSGNNVLARKMSGQY 180 Query: 190 SPAELSYLLMGIGFATFLILSLTGHAASGTLGGFLSPLKSGTFILSAVYLGVIASLVTTL 249 P L+Y ++ IGF F I+S+ H+ +GTL + P S FI+S YLG+++SLVT+ Sbjct: 181 KPISLTYTVICIGFVFFNIVSIINHSLNGTLNLYFKPFTSPLFIVSIFYLGILSSLVTSF 240 Query: 250 TSTYILSKIEASLMSVFSNLSTIVSIAAGALFLGEEITVYHWIGSFLIIAGVIGTNRLGR 309 Y LSKIEAS MSVF+NLST++++ AG +FLGE++ +H IGSF+II G++GTN LG Sbjct: 241 LLNYSLSKIEASKMSVFNNLSTLITMMAGVVFLGEKLQYFHIIGSFMIILGIVGTN-LGD 299 Query: 310 K 310 K Sbjct: 300 K 300 >A5I3D8.1 A5I3D8_CLOBH Putative membrane protein Length = 302 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 145/301 (48%), Positives = 205/301 (68%), Gaps = 1/301 (0%) Query: 10 MQQQGLKLAYIFAVLNAVIIGFSFLFTKVALGHAGPLDTLTYRFAASFVVMSVPVAFGWV 69 M+ K AY+ A+L ++IIGFSFLF+K++L A PLDTL YRF SF+ V V GW+ Sbjct: 1 MKFSHKKKAYVSAILYSIIIGFSFLFSKISLTFADPLDTLAYRFTVSFIFAFVSVLLGWI 60 Query: 70 KVSYRGKPIGRALLLAAMYPLGFFTLQVFGLQHATSAEGGILYSFTPVVTMIIASVFLKE 129 K+ K I L L+ YP+ FF Q+FGL + S+E GI+ + P+ TMI + +FLKE Sbjct: 61 KLDITKKDILSILPLSLFYPIMFFGFQIFGLVYIASSEAGIIQATIPIFTMIFSIIFLKE 120 Query: 130 TTTLLQKLCIFLSVFGVVFIFVMKGSSIQLSNMTGIVLLFLTCLAFAGYSVLARSLSRHF 189 ++LQKL I LSV GVV+IF MKG +++ + GIVL+ L+ L+ +G +VLAR +S + Sbjct: 121 RPSILQKLSILLSVAGVVYIFFMKGVNLKSNIFIGIVLILLSALSSSGNNVLARKMSGQY 180 Query: 190 SPAELSYLLMGIGFATFLILSLTGHAASGTLGGFLSPLKSGTFILSAVYLGVIASLVTTL 249 P L+Y ++ IGF F I+S+ H+ +GTL + P S FI+S YLG+++SLVT+ Sbjct: 181 KPISLTYTVICIGFVFFNIVSIINHSLNGTLNLYFKPFTSPLFIVSIFYLGILSSLVTSF 240 Query: 250 TSTYILSKIEASLMSVFSNLSTIVSIAAGALFLGEEITVYHWIGSFLIIAGVIGTNRLGR 309 Y LSKIEAS MSVF+NLST++++ AG +FLGE++ +H IGSF+II G++GTN LG Sbjct: 241 LLNYSLSKIEASKMSVFNNLSTLITMMAGVVFLGEKLQYFHIIGSFMIILGIVGTN-LGD 299 Query: 310 K 310 K Sbjct: 300 K 300 >C1FPR7.1 C1FPR7_CLOBJ Putative membrane protein Length = 302 Score = 258 bits (658), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 144/301 (47%), Positives = 205/301 (68%), Gaps = 1/301 (0%) Query: 10 MQQQGLKLAYIFAVLNAVIIGFSFLFTKVALGHAGPLDTLTYRFAASFVVMSVPVAFGWV 69 M+ K AY+ A+L ++IIGFSFLF+K++L A PLDTL +RF SF+ V V GW+ Sbjct: 1 MKFSHKKKAYVSAILYSIIIGFSFLFSKISLTFADPLDTLAHRFTVSFIFAFVSVLLGWI 60 Query: 70 KVSYRGKPIGRALLLAAMYPLGFFTLQVFGLQHATSAEGGILYSFTPVVTMIIASVFLKE 129 K+ K I L L+ YP+ FF Q+FGL + S+E GI+ + P+ TMI + +FLKE Sbjct: 61 KLDITKKDILSILPLSLFYPIMFFGFQIFGLVYIASSEAGIIQATIPIFTMIFSIIFLKE 120 Query: 130 TTTLLQKLCIFLSVFGVVFIFVMKGSSIQLSNMTGIVLLFLTCLAFAGYSVLARSLSRHF 189 ++LQKL I LSV GVV+IF MKG +++ + GIVL+ L+ L+ +G +VLAR +S + Sbjct: 121 RPSILQKLSILLSVAGVVYIFFMKGVNLKSNVFIGIVLILLSALSSSGNNVLARKMSGQY 180 Query: 190 SPAELSYLLMGIGFATFLILSLTGHAASGTLGGFLSPLKSGTFILSAVYLGVIASLVTTL 249 P L+Y ++ IGF F I+S+ H+ +GTL + P + FI+S YLG+++SLVT+ Sbjct: 181 KPISLTYTVICIGFVFFNIVSIINHSLNGTLNLYFKPFTNPLFIVSIFYLGILSSLVTSF 240 Query: 250 TSTYILSKIEASLMSVFSNLSTIVSIAAGALFLGEEITVYHWIGSFLIIAGVIGTNRLGR 309 Y LSKIEAS MSVF+NLST++++ AG +FLGE++ +H IGSF+II G+IGTN LG Sbjct: 241 LLNYSLSKIEASKMSVFNNLSTLITMMAGVVFLGEKLQYFHIIGSFMIILGIIGTN-LGD 299 Query: 310 K 310 K Sbjct: 300 K 300 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.328 0.141 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,693,695,940 Number of extensions: 65427617 Number of successful extensions: 294425 Number of sequences better than 1.0e-05: 1784 Number of HSP's gapped: 294394 Number of HSP's successfully gapped: 1784 Length of query: 326 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 190 Effective length of database: 1,779,438,163 Effective search space: 338093250970 Effective search space used: 338093250970 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 131 (55.1 bits)