BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0164.0012.p (156 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q8Y9A8.1 Q8Y9A8_LISMO Lmo0624 protein 155 2e-36 Q4ERD0.1 Q4ERD0_LISMO Acetyltransferase, GNAT family 155 2e-36 Q722S6.1 Q722S6_LISMF Acetyltransferase, GNAT family 154 4e-36 C1L0Q3.1 C1L0Q3_LISMC Putative uncharacterized protein 154 4e-36 Q4ELH5.1 Q4ELH5_LISMO Acetyltransferase, GNAT family 154 4e-36 >Q8Y9A8.1 Q8Y9A8_LISMO Lmo0624 protein Length = 147 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 74/142 (52%), Positives = 101/142 (71%), Gaps = 3/142 (2%) Query: 15 FLSQSTRDYAEDKIKAGSWDVETAMQLSQDEMTRFLPEGLNTEGAYLYSIVETETDTQAG 74 FL+ + DYA++K++AG+WD E ++ SQD + L +G+ T YLYSI+ E + G Sbjct: 9 FLTTAITDYAKEKVEAGTWDEEESLAKSQDSFNKLLYDGITTPNEYLYSIISGE---KIG 65 Query: 75 YIWFNVSEGRNGREAFIYDFYVFEAFQGKGYGKQTLLALDEEARKLKITRIGLHVFGQNN 134 YIWF+V E R+G+ AFIYDF +FEAF+GKG+G +TL ALD A++++IT+IGLHVF N Sbjct: 66 YIWFHVDETRSGKHAFIYDFVIFEAFRGKGFGTKTLAALDVLAKEMQITKIGLHVFAHNQ 125 Query: 135 RAFELYKKAGFAVTDITMSKDL 156 A LY K GF TDITM+K L Sbjct: 126 TAIGLYNKVGFQNTDITMAKYL 147 >Q4ERD0.1 Q4ERD0_LISMO Acetyltransferase, GNAT family Length = 147 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 74/142 (52%), Positives = 101/142 (71%), Gaps = 3/142 (2%) Query: 15 FLSQSTRDYAEDKIKAGSWDVETAMQLSQDEMTRFLPEGLNTEGAYLYSIVETETDTQAG 74 FL+ + DYA++K++AG+WD E ++ SQD + L +G+ T YLYSI+ E + G Sbjct: 9 FLTTAITDYAKEKVEAGTWDEEESLAKSQDSFNKLLYDGITTPNEYLYSIISGE---KIG 65 Query: 75 YIWFNVSEGRNGREAFIYDFYVFEAFQGKGYGKQTLLALDEEARKLKITRIGLHVFGQNN 134 YIWF+V E R+G+ AFIYDF +FEAF+GKG+G +TL ALD A++++IT+IGLHVF N Sbjct: 66 YIWFHVDETRSGKHAFIYDFVIFEAFRGKGFGTKTLAALDVLAKEMQITKIGLHVFAHNQ 125 Query: 135 RAFELYKKAGFAVTDITMSKDL 156 A LY K GF TDITM+K L Sbjct: 126 TAIGLYNKVGFQNTDITMAKYL 147 >Q722S6.1 Q722S6_LISMF Acetyltransferase, GNAT family Length = 147 Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 76/150 (50%), Positives = 102/150 (68%), Gaps = 3/150 (2%) Query: 7 MDETTFQFFLSQSTRDYAEDKIKAGSWDVETAMQLSQDEMTRFLPEGLNTEGAYLYSIVE 66 M + + FLS + DYA +K++AG+WD E A+ SQD + L +G+ T YLYSI+ Sbjct: 1 MTASDLEDFLSTAITDYANEKVEAGTWDEEEALAKSQDSFNKLLYDGITTPNEYLYSIIS 60 Query: 67 TETDTQAGYIWFNVSEGRNGREAFIYDFYVFEAFQGKGYGKQTLLALDEEARKLKITRIG 126 E + GYIWF+V E R+G+ AFIYDF +FEAF+GKG+G +TL ALD A++++IT+I Sbjct: 61 GE---KIGYIWFHVDETRSGKHAFIYDFVIFEAFRGKGFGTKTLEALDALAKEMQITKIE 117 Query: 127 LHVFGQNNRAFELYKKAGFAVTDITMSKDL 156 LHVF N A LY K GF TDITM+K L Sbjct: 118 LHVFAHNQTAIGLYNKVGFQNTDITMAKYL 147 >C1L0Q3.1 C1L0Q3_LISMC Putative uncharacterized protein Length = 147 Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 76/150 (50%), Positives = 102/150 (68%), Gaps = 3/150 (2%) Query: 7 MDETTFQFFLSQSTRDYAEDKIKAGSWDVETAMQLSQDEMTRFLPEGLNTEGAYLYSIVE 66 M + + FLS + DYA +K++AG+WD E A+ SQD + L +G+ T YLYSI+ Sbjct: 1 MTASDLEDFLSTAITDYANEKVEAGTWDEEEALAKSQDSFNKLLYDGITTPNEYLYSIIS 60 Query: 67 TETDTQAGYIWFNVSEGRNGREAFIYDFYVFEAFQGKGYGKQTLLALDEEARKLKITRIG 126 E + GYIWF+V E R+G+ AFIYDF +FEAF+GKG+G +TL ALD A++++IT+I Sbjct: 61 GE---KIGYIWFHVDETRSGKHAFIYDFVIFEAFRGKGFGTKTLEALDALAKEMQITKIE 117 Query: 127 LHVFGQNNRAFELYKKAGFAVTDITMSKDL 156 LHVF N A LY K GF TDITM+K L Sbjct: 118 LHVFAHNQTAIGLYNKVGFQNTDITMAKYL 147 >Q4ELH5.1 Q4ELH5_LISMO Acetyltransferase, GNAT family Length = 147 Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 76/150 (50%), Positives = 102/150 (68%), Gaps = 3/150 (2%) Query: 7 MDETTFQFFLSQSTRDYAEDKIKAGSWDVETAMQLSQDEMTRFLPEGLNTEGAYLYSIVE 66 M + + FLS + DYA +K++AG+WD E A+ SQD + L +G+ T YLYSI+ Sbjct: 1 MTASDLEDFLSTAITDYANEKVEAGTWDEEEALAKSQDSFNKLLYDGITTPNEYLYSIIS 60 Query: 67 TETDTQAGYIWFNVSEGRNGREAFIYDFYVFEAFQGKGYGKQTLLALDEEARKLKITRIG 126 E + GYIWF+V E R+G+ AFIYDF +FEAF+GKG+G +TL ALD A++++IT+I Sbjct: 61 GE---KIGYIWFHVDETRSGKHAFIYDFVIFEAFRGKGFGTKTLEALDALAKEMQITKIE 117 Query: 127 LHVFGQNNRAFELYKKAGFAVTDITMSKDL 156 LHVF N A LY K GF TDITM+K L Sbjct: 118 LHVFAHNQTAIGLYNKVGFQNTDITMAKYL 147 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.135 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 862,261,814 Number of extensions: 33853450 Number of successful extensions: 87453 Number of sequences better than 1.0e-05: 109 Number of HSP's gapped: 87740 Number of HSP's successfully gapped: 109 Length of query: 156 Length of database: 3,060,696,203 Length adjustment: 117 Effective length of query: 39 Effective length of database: 1,958,437,448 Effective search space: 76379060472 Effective search space used: 76379060472 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)