BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0164.0004.p (303 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7M8.1 B3K7M8_9BACI Molybdenum cofactor biosynthesis protein A 485 e-135 Q4EI22.1 Q4EI22_LISMO Molybdenum cofactor biosynthesis protein A 392 e-107 Q721B9.1 MOAA_LISMF Molybdenum cofactor biosynthesis protein A 392 e-107 Q4ERS9.1 Q4ERS9_LISMO Molybdenum cofactor biosynthesis protein A 392 e-107 Q8Y870.1 MOAA_LISMO Molybdenum cofactor biosynthesis protein A 392 e-107 >B3K7M8.1 B3K7M8_9BACI Molybdenum cofactor biosynthesis protein A Length = 334 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 224/303 (73%), Positives = 266/303 (87%) Query: 1 MPAEGMQFQPQDEIMSYEEITAVVKALAPLGLSKIRLTGGEPLVRKDLDKLVSMIAAIPG 60 MP EGM+FQP D+IMSYEEI ++++ LAP+G+SK+RLTGGEPLVRKDL+ LV IA+I G Sbjct: 32 MPEEGMEFQPHDQIMSYEEIASIMRVLAPMGVSKVRLTGGEPLVRKDLETLVHQIASIEG 91 Query: 61 IEDISLTTNGLMLPAKAALLKQAGLSRVNISLDSLRQDRFAMITRGGEVAKVLKGIEAAE 120 ++DISLTTNG+MLP+KA LLK+AGL+R+NISLDSL+++R+A ITRGG V KVL+GIEAA Sbjct: 92 VQDISLTTNGIMLPSKARLLKEAGLTRINISLDSLQEERYARITRGGRVHKVLEGIEAAY 151 Query: 121 AAGLSPIKLNVVLMKGINDDEIKDFISLTLNSPLNVRFIEYMPIGSASDAWRQTYLPLET 180 AGL+PIKLN+VLMKG N+DEI+DFI+LTL+ PL+VRFIEYMPIG ASD WR +YLPL Sbjct: 152 EAGLNPIKLNMVLMKGFNEDEIRDFIALTLDRPLHVRFIEYMPIGQASDTWRDSYLPLSR 211 Query: 181 VVEACHEAGWATEEADMPSGNGPSQNRRVVGARGTFGLIHPVSEHFCDNCNRLRLTADGH 240 V E C EAGWA +E PSGNGPS+N +VVGA GTFGLIHPVS+HFCD+CNRLRLTADGH Sbjct: 212 VSEVCQEAGWAIQEEQGPSGNGPSRNMKVVGATGTFGLIHPVSDHFCDSCNRLRLTADGH 271 Query: 241 IKACLYWADEYNVRPLTSDPAAVQALFRQALGNKPHNHEMALALERKAQSHTPTVRRMSQ 300 IKACLYW+DE+NVR + DP+AV LFR+ALG KP NHEMALALE+KAQSHTPTVRRMSQ Sbjct: 272 IKACLYWSDEFNVRRVIDDPSAVANLFRKALGAKPLNHEMALALEKKAQSHTPTVRRMSQ 331 Query: 301 IGG 303 IGG Sbjct: 332 IGG 334 >Q4EI22.1 Q4EI22_LISMO Molybdenum cofactor biosynthesis protein A Length = 333 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 178/303 (58%), Positives = 229/303 (75%) Query: 1 MPAEGMQFQPQDEIMSYEEITAVVKALAPLGLSKIRLTGGEPLVRKDLDKLVSMIAAIPG 60 MP EG+ F P ++++S +EI + ++ + G+ K+R+TGGEPL+R D+ ++V + AIP Sbjct: 31 MPEEGLTFLPHEKVLSKDEIVSFMELMVKFGIKKVRITGGEPLLRTDIVEIVRGLGAIPE 90 Query: 61 IEDISLTTNGLMLPAKAALLKQAGLSRVNISLDSLRQDRFAMITRGGEVAKVLKGIEAAE 120 IEDIS+TTN + L KA LK AGL+RVNISLDSL +DRF ITRGG + KVL GI+ AE Sbjct: 91 IEDISITTNAMYLAKKAEALKDAGLTRVNISLDSLHEDRFKAITRGGRLQKVLDGIQKAE 150 Query: 121 AAGLSPIKLNVVLMKGINDDEIKDFISLTLNSPLNVRFIEYMPIGSASDAWRQTYLPLET 180 GL PIKLNVVL+KG NDDEI DF+ T + +N+RFIEYMPIG A +W++ YLPL+T Sbjct: 151 EVGLFPIKLNVVLIKGQNDDEITDFLRFTKDKDINIRFIEYMPIGHAGTSWKEKYLPLDT 210 Query: 181 VVEACHEAGWATEEADMPSGNGPSQNRRVVGARGTFGLIHPVSEHFCDNCNRLRLTADGH 240 + EAC+EAG+ E D GNGPS+N R+ GA+GTFG+IHPVS HFCD+CNRLRLTADG+ Sbjct: 211 IFEACNEAGYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRLRLTADGY 270 Query: 241 IKACLYWADEYNVRPLTSDPAAVQALFRQALGNKPHNHEMALALERKAQSHTPTVRRMSQ 300 IKACLYW +E N+RP DP + L ++A+ NKP NHEMAL L+ + QS+ PT RRMSQ Sbjct: 271 IKACLYWDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQ 330 Query: 301 IGG 303 IGG Sbjct: 331 IGG 333 >Q721B9.1 MOAA_LISMF Molybdenum cofactor biosynthesis protein A Length = 333 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 178/303 (58%), Positives = 229/303 (75%) Query: 1 MPAEGMQFQPQDEIMSYEEITAVVKALAPLGLSKIRLTGGEPLVRKDLDKLVSMIAAIPG 60 MP EG+ F P ++++S +EI + ++ + G+ K+R+TGGEPL+R D+ ++V + AIP Sbjct: 31 MPEEGLTFLPHEKVLSKDEIVSFMELMVKFGIKKVRITGGEPLLRTDIVEIVRGLGAIPE 90 Query: 61 IEDISLTTNGLMLPAKAALLKQAGLSRVNISLDSLRQDRFAMITRGGEVAKVLKGIEAAE 120 IEDIS+TTN + L KA LK AGL+RVNISLDSL +DRF ITRGG + KVL GI+ AE Sbjct: 91 IEDISITTNAMYLAKKAEALKDAGLTRVNISLDSLHEDRFKAITRGGRLQKVLDGIQKAE 150 Query: 121 AAGLSPIKLNVVLMKGINDDEIKDFISLTLNSPLNVRFIEYMPIGSASDAWRQTYLPLET 180 GL PIKLNVVL+KG NDDEI DF+ T + +N+RFIEYMPIG A +W++ YLPL+T Sbjct: 151 EVGLFPIKLNVVLIKGQNDDEITDFLRFTKDKDINIRFIEYMPIGHAGTSWKEKYLPLDT 210 Query: 181 VVEACHEAGWATEEADMPSGNGPSQNRRVVGARGTFGLIHPVSEHFCDNCNRLRLTADGH 240 + EAC+EAG+ E D GNGPS+N R+ GA+GTFG+IHPVS HFCD+CNRLRLTADG+ Sbjct: 211 IFEACNEAGYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRLRLTADGY 270 Query: 241 IKACLYWADEYNVRPLTSDPAAVQALFRQALGNKPHNHEMALALERKAQSHTPTVRRMSQ 300 IKACLYW +E N+RP DP + L ++A+ NKP NHEMAL L+ + QS+ PT RRMSQ Sbjct: 271 IKACLYWDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQ 330 Query: 301 IGG 303 IGG Sbjct: 331 IGG 333 >Q4ERS9.1 Q4ERS9_LISMO Molybdenum cofactor biosynthesis protein A Length = 333 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 178/303 (58%), Positives = 229/303 (75%) Query: 1 MPAEGMQFQPQDEIMSYEEITAVVKALAPLGLSKIRLTGGEPLVRKDLDKLVSMIAAIPG 60 MP EG+ F P ++++S +EI + ++ + G+ K+R+TGGEPL+R D+ ++V + AIP Sbjct: 31 MPEEGLTFLPHEKVLSKDEIVSFMELMVKFGIKKVRITGGEPLLRTDIVEIVRGLGAIPE 90 Query: 61 IEDISLTTNGLMLPAKAALLKQAGLSRVNISLDSLRQDRFAMITRGGEVAKVLKGIEAAE 120 IEDIS+TTN + L KA LK+AGL+RVNISLDSL DRF ITRGG + KVL GI+ AE Sbjct: 91 IEDISITTNAMYLAKKAEALKEAGLTRVNISLDSLHADRFKAITRGGRLQKVLDGIQKAE 150 Query: 121 AAGLSPIKLNVVLMKGINDDEIKDFISLTLNSPLNVRFIEYMPIGSASDAWRQTYLPLET 180 GL PIKLNVVL+KG NDDEI DF+ T + +N+RFIEYMPIG A +W++ YLPL+T Sbjct: 151 EVGLFPIKLNVVLIKGQNDDEITDFLRFTKDKDINIRFIEYMPIGHAGTSWKEKYLPLDT 210 Query: 181 VVEACHEAGWATEEADMPSGNGPSQNRRVVGARGTFGLIHPVSEHFCDNCNRLRLTADGH 240 + EAC+EAG+ E D GNGPS+N R+ GA+GTFG+IHPVS HFCD+CNRLRLTADG+ Sbjct: 211 IFEACNEAGYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRLRLTADGY 270 Query: 241 IKACLYWADEYNVRPLTSDPAAVQALFRQALGNKPHNHEMALALERKAQSHTPTVRRMSQ 300 IKACLYW +E N+RP DP + L ++A+ NKP NHEMAL L+ + QS+ PT RRMSQ Sbjct: 271 IKACLYWDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQ 330 Query: 301 IGG 303 IGG Sbjct: 331 IGG 333 >Q8Y870.1 MOAA_LISMO Molybdenum cofactor biosynthesis protein A Length = 333 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 178/303 (58%), Positives = 229/303 (75%) Query: 1 MPAEGMQFQPQDEIMSYEEITAVVKALAPLGLSKIRLTGGEPLVRKDLDKLVSMIAAIPG 60 MP EG+ F P ++++S +EI + ++ + G+ K+R+TGGEPL+R D+ ++V + AIP Sbjct: 31 MPEEGLTFLPHEKVLSKDEIVSFMELMVKFGIKKVRITGGEPLLRTDIVEIVRGLGAIPE 90 Query: 61 IEDISLTTNGLMLPAKAALLKQAGLSRVNISLDSLRQDRFAMITRGGEVAKVLKGIEAAE 120 IEDIS+TTN + L KA LK+AGL+RVNISLDSL DRF ITRGG + KVL GI+ AE Sbjct: 91 IEDISITTNAMYLAKKAEALKEAGLTRVNISLDSLHADRFKAITRGGRLQKVLDGIQKAE 150 Query: 121 AAGLSPIKLNVVLMKGINDDEIKDFISLTLNSPLNVRFIEYMPIGSASDAWRQTYLPLET 180 GL PIKLNVVL+KG NDDEI DF+ T + +N+RFIEYMPIG A +W++ YLPL+T Sbjct: 151 EVGLFPIKLNVVLIKGQNDDEITDFLRFTKDKDINIRFIEYMPIGHAGTSWKEKYLPLDT 210 Query: 181 VVEACHEAGWATEEADMPSGNGPSQNRRVVGARGTFGLIHPVSEHFCDNCNRLRLTADGH 240 + EAC+EAG+ E D GNGPS+N R+ GA+GTFG+IHPVS HFCD+CNRLRLTADG+ Sbjct: 211 IFEACNEAGYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRLRLTADGY 270 Query: 241 IKACLYWADEYNVRPLTSDPAAVQALFRQALGNKPHNHEMALALERKAQSHTPTVRRMSQ 300 IKACLYW +E N+RP DP + L ++A+ NKP NHEMAL L+ + QS+ PT RRMSQ Sbjct: 271 IKACLYWDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQ 330 Query: 301 IGG 303 IGG Sbjct: 331 IGG 333 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,719,430,640 Number of extensions: 69191251 Number of successful extensions: 181651 Number of sequences better than 1.0e-05: 1610 Number of HSP's gapped: 179158 Number of HSP's successfully gapped: 1623 Length of query: 303 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 168 Effective length of database: 1,788,859,178 Effective search space: 300528341904 Effective search space used: 300528341904 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)