BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0162.0002.p (374 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K4K6.1 B3K4K6_9BACI Carbohydrate kinase, YjeF related protein 240 2e-61 A8UR54.1 A8UR54_9AQUI Putative uncharacterized protein 100 4e-19 A1HST2.1 A1HST2_9FIRM Carbohydrate kinase, YjeF related protein 97 2e-18 A8ZVC4.1 A8ZVC4_DESOH Carbohydrate kinase, YjeF related protein 94 2e-17 A5D4H8.1 A5D4H8_PELTS Predicted Carbohydrate kinase 92 7e-17 >B3K4K6.1 B3K4K6_9BACI Carbohydrate kinase, YjeF related protein Length = 582 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 130/197 (65%), Positives = 143/197 (72%), Gaps = 7/197 (3%) Query: 102 KGNNGGDGLAAARYLREAGIAVTLVYXXXXXXXXXXXXXXXXXXXXXXXPAVVYGRDRVD 161 KGNNGGDG+ AAR+LR+AGI+VTL+Y PA+V+GR VD Sbjct: 129 KGNNGGDGVVAARHLRDAGISVTLLYAAEPSALAGEAAVQRDAAAALGIPALVHGRAAVD 188 Query: 162 FAAYSGIVDALLGTGSAGAPRGAYAELIAAANSSGKPIVSADIPSGLDADTGQAHEPCIH 221 + AY+GIVDALLGTG+ GAPRGAYA LI AAN SG PIVSADIPSGLDADTG HEPCI Sbjct: 189 YGAYTGIVDALLGTGATGAPRGAYAALIQAANDSGLPIVSADIPSGLDADTGARHEPCIS 248 Query: 222 AAVTVCLAFLKRGLLQYPGAGNAGQVVVRSIGIPAALAREGGVPVSLLTPEVLRTRLQVD 281 AAVTVCLAFLKRGL+QYPGAG AG+VVVRSIGIPA+L RE GV LLTP VLRT L D Sbjct: 249 AAVTVCLAFLKRGLVQYPGAGAAGRVVVRSIGIPASLCREQGVSTHLLTPHVLRTELGAD 308 Query: 282 VSRRXXXXXXXRGPQGH 298 VSRR R P GH Sbjct: 309 VSRR-------RAPDGH 318 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/43 (74%), Positives = 39/43 (90%) Query: 1 MYVVTAEEMRKLDRETIERLGIPAVALMENAGRAIAEEIIKLC 43 MYVVT+E+MR LD TI R+GIPA+ALMENAG+AIAEE++KLC Sbjct: 1 MYVVTSEQMRALDNYTIRRIGIPAIALMENAGKAIAEEVLKLC 43 >A8UR54.1 A8UR54_9AQUI Putative uncharacterized protein Length = 514 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/175 (40%), Positives = 84/175 (48%), Gaps = 9/175 (5%) Query: 102 KGNNGGDGLAAARYLREAGIAVTLVYXXXXXXXXXXXXXXXXXXXXXXXPAVVYGRDRVD 161 KGNNGGDG+A AR LR G+ L Y P ++R Sbjct: 55 KGNNGGDGIAVARMLRLKGMEADL-YLPMGEPKGDGALQLKIYRNLGYEPL----KERPI 109 Query: 162 FAAYSGIVDALLGTGSAGAPRGAYAELIAAANSSGKPIVSADIPSGLDADTGQAHEPCIH 221 + Y IVDAL GTG +G AE I N+SG PI++ DIPSGL ADTG+ EP + Sbjct: 110 YRNYDLIVDALFGTGFQPPVKGKVAETILDMNASGVPILAVDIPSGLSADTGKTFEPSVK 169 Query: 222 AAVTVCLAFLKRGLLQYPGAGNAGQVVVRSIGIPAALA----REGGVPVSLLTPE 272 A TV F K + YP A G+VVV I IP LA R+ P L PE Sbjct: 170 AVATVTFQFPKLCHILYPAAKLCGEVVVHDISIPERLAENIKRDVIAPSGLKLPE 224 >A1HST2.1 A1HST2_9FIRM Carbohydrate kinase, YjeF related protein Length = 247 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 84/163 (51%), Gaps = 6/163 (3%) Query: 102 KGNNGGDGLAAARYLREAG--IAVTLVYXXXXXXXXXXXXXXXXXXXXXXXPAVVYGRD- 158 KGNNGGDG AAR+L G + V LV+ + RD Sbjct: 57 KGNNGGDGFVAARHLASLGAKVKVFLVFDEGDMAGDAQVNLNIIKKMGIDVLPLAGDRDW 116 Query: 159 ---RVDFAAYSGIVDALLGTGSAGAPRGAYAELIAAANSSGKPIVSADIPSGLDADTGQA 215 RV I+DA+LGTG +GA +G A + NS+GKP+V+ADIPSG+ ADTG+ Sbjct: 117 DMARVAATFADCIIDAMLGTGFSGAIQGNMARAVELVNSAGKPVVAADIPSGVHADTGRV 176 Query: 216 HEPCIHAAVTVCLAFLKRGLLQYPGAGNAGQVVVRSIGIPAAL 258 + A TV K GLL YPGA G++VV I IPAAL Sbjct: 177 GTVAVRADYTVTFGLPKPGLLLYPGAEYTGRLVVADITIPAAL 219 >A8ZVC4.1 A8ZVC4_DESOH Carbohydrate kinase, YjeF related protein Length = 533 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 84/176 (47%), Gaps = 6/176 (3%) Query: 102 KGNNGGDGLAAARYLREAGIAVTLVYXXXXXXXXXXXXXXXXXXXXXXXPAVV------Y 155 +GNNGGDG ARYL + G VT+ P + + Sbjct: 57 RGNNGGDGFVMARYLAQRGAEVTVFLLAEESKVSGDAKANLDLLSALNVPVICIPEEKSF 116 Query: 156 GRDRVDFAAYSGIVDALLGTGSAGAPRGAYAELIAAANSSGKPIVSADIPSGLDADTGQA 215 R + + +DALLGTG +G +A+ I N SG+P+ + D+PSGLD+DTGQ Sbjct: 117 ARKKTALSHQHLFIDALLGTGLKFEVKGLFAKAIDFMNRSGRPVFAVDMPSGLDSDTGQP 176 Query: 216 HEPCIHAAVTVCLAFLKRGLLQYPGAGNAGQVVVRSIGIPAALAREGGVPVSLLTP 271 C+ AA T F K G + +PGA G++ V IGIP +A E LLTP Sbjct: 177 RGTCVKAAATATFGFAKPGQVLFPGAAFTGKLGVVDIGIPPFVADEADSRRWLLTP 232 >A5D4H8.1 A5D4H8_PELTS Predicted Carbohydrate kinase Length = 527 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 67/168 (39%), Positives = 83/168 (49%), Gaps = 10/168 (5%) Query: 102 KGNNGGDGLAAARYLREAGIAVTLVYXXXXXXXXXXXXXXXXXXXXXXXPAVVY------ 155 KGNNGGDGL AAR+L G V ++ VY Sbjct: 57 KGNNGGDGLVAARHLLNMGAEVKVMALADTAEITGDALVNLEIWQKMGQR--VYSLRHGD 114 Query: 156 GRDRVDFAAYSG--IVDALLGTGSAGAPRGAYAELIAAANSSGKPIVSADIPSGLDADTG 213 G + V A + IVDA+ GTG G +I N SGKP+V+ DIPSGL+ADTG Sbjct: 115 GINIVRLALMNTDLIVDAIYGTGFKGRVAEKAGRIIEVLNGSGKPVVAVDIPSGLEADTG 174 Query: 214 QAHEPCIHAAVTVCLAFLKRGLLQYPGAGNAGQVVVRSIGIPAALARE 261 + + PC+ AA TV K GLL PGAG AG++ V I IPA L + Sbjct: 175 RVNGPCLRAAHTVTFGLPKLGLLLEPGAGYAGRLHVADISIPAGLVSK 222 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,622,698,030 Number of extensions: 57561308 Number of successful extensions: 138282 Number of sequences better than 1.0e-05: 666 Number of HSP's gapped: 138217 Number of HSP's successfully gapped: 670 Length of query: 374 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 237 Effective length of database: 1,770,017,148 Effective search space: 419494064076 Effective search space used: 419494064076 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)