BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0159.0002.p
         (100 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KLA3.1 B3KLA3_9BACI Putative uncharacterized protein                149   6e-35
C0ZES1.1 C0ZES1_BREBN Putative uncharacterized protein                147   3e-34
B1D7G7.1 B1D7G7_9BACL HesB/YadR/YfhF-family protein                   140   3e-32
Q8EN35.1 Q8EN35_OCEIH Putative uncharacterized protein OB2655         124   2e-27
C1PFM5.1 C1PFM5_BACCO Putative uncharacterized protein                110   4e-23

>B3KLA3.1 B3KLA3_9BACI Putative uncharacterized protein
          Length = 89

 Score =  149 bits (377), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 70/89 (78%), Positives = 80/89 (89%)

Query: 12  VIKKTMELEGNSELKLRVAITHAHGDHAHYGLDLDTPKENDIVVSTDKEIDVILDPNQPL 71
           +IK+ ++ E N + KLRV +THAHGDHAHYGLDLDTPKE+D+VVSTDKEIDVIL+  QP 
Sbjct: 1   MIKRELDKEENKDKKLRVLVTHAHGDHAHYGLDLDTPKESDVVVSTDKEIDVILEAGQPF 60

Query: 72  LDGVKIDYLYFPEEGFVITNPSKGNHGDH 100
           LDGVKIDYLYFPEEGFVITNPS+GNHGDH
Sbjct: 61  LDGVKIDYLYFPEEGFVITNPSQGNHGDH 89


>C0ZES1.1 C0ZES1_BREBN Putative uncharacterized protein
          Length = 100

 Score =  147 bits (371), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/100 (71%), Positives = 82/100 (82%)

Query: 1   MNVKITRNAAKVIKKTMELEGNSELKLRVAITHAHGDHAHYGLDLDTPKENDIVVSTDKE 60
           M +KITRNAAK +   +E E + ELKLRV ITHAHGDHAHYGL LD P E D+V+STDKE
Sbjct: 1   MKLKITRNAAKQLAPIIEQEEDKELKLRVYITHAHGDHAHYGLALDKPTEEDVVISTDKE 60

Query: 61  IDVILDPNQPLLDGVKIDYLYFPEEGFVITNPSKGNHGDH 100
           IDVI+  ++PLLDGV IDYL+ P+EGFVITNPSKGN GDH
Sbjct: 61  IDVIVKKDEPLLDGVVIDYLFLPQEGFVITNPSKGNTGDH 100


>B1D7G7.1 B1D7G7_9BACL HesB/YadR/YfhF-family protein
          Length = 100

 Score =  140 bits (354), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/100 (66%), Positives = 79/100 (79%)

Query: 1   MNVKITRNAAKVIKKTMELEGNSELKLRVAITHAHGDHAHYGLDLDTPKENDIVVSTDKE 60
           MNVKITRNAAKV+K  ++   N   KLRV +TH+HGDHAHYG+ +D P E D+VVSTDKE
Sbjct: 1   MNVKITRNAAKVLKLELDKPENEGKKLRVYVTHSHGDHAHYGMAIDEPNEKDVVVSTDKE 60

Query: 61  IDVILDPNQPLLDGVKIDYLYFPEEGFVITNPSKGNHGDH 100
           IDVIL+ +   LDGV++DY Y PEEGF +TNPSKGN GDH
Sbjct: 61  IDVILEKDNEFLDGVRVDYFYVPEEGFAVTNPSKGNSGDH 100


>Q8EN35.1 Q8EN35_OCEIH Putative uncharacterized protein OB2655
          Length = 99

 Score =  124 bits (312), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/100 (60%), Positives = 77/100 (77%), Gaps = 1/100 (1%)

Query: 1   MNVKITRNAAKVIKKTMELEGNSELKLRVAITHAHGDHAHYGLDLDTPKENDIVVSTDKE 60
           M VKI RNAAKV+K+ M LE  S+ K+R+ I+H HGDHAHYG+ LDTP E+DIVV TDK+
Sbjct: 1   MKVKINRNAAKVLKR-MLLEDGSDKKVRIYISHMHGDHAHYGMSLDTPGEHDIVVPTDKD 59

Query: 61  IDVILDPNQPLLDGVKIDYLYFPEEGFVITNPSKGNHGDH 100
           +D+ILD  +  LDG+ I Y +  +EGFVITNP+KG+H  H
Sbjct: 60  VDIILDCREEFLDGIWIQYFFVEDEGFVITNPTKGHHHHH 99


>C1PFM5.1 C1PFM5_BACCO Putative uncharacterized protein
          Length = 104

 Score =  110 bits (275), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/93 (56%), Positives = 65/93 (69%)

Query: 1  MNVKITRNAAKVIKKTMELEGNSELKLRVAITHAHGDHAHYGLDLDTPKENDIVVSTDKE 60
          MNVKI RNAAK+ KK +E E      +RV +T  HGDHAHY + LDTP E+D +V TDK 
Sbjct: 1  MNVKINRNAAKMFKKILEEEDAEGKMIRVFVTEMHGDHAHYDITLDTPGEHDEIVKTDKG 60

Query: 61 IDVILDPNQPLLDGVKIDYLYFPEEGFVITNPS 93
          ID++LD  +P LDG+ I Y Y P+E FVITNP 
Sbjct: 61 IDILLDSREPYLDGIWIQYFYVPQEEFVITNPR 93


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.314    0.137    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 638,936,507
Number of extensions: 25170222
Number of successful extensions: 48571
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 48624
Number of HSP's successfully gapped: 8
Length of query: 100
Length of database: 3,060,696,203
Length adjustment: 69
Effective length of query: 31
Effective length of database: 2,410,646,168
Effective search space: 74730031208
Effective search space used: 74730031208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 125 (52.8 bits)