BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0034.p (251 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A3DJY3.1 A3DJY3_CLOTH ABC transporter related protein 252 3e-65 Q894P2.1 Q894P2_CLOTE Transporter 241 5e-62 Q24WN4.1 Q24WN4_DESHY Putative uncharacterized protein 224 6e-57 B8FYM2.1 B8FYM2_DESHD ABC transporter related 224 6e-57 B9DXV2.1 B9DXV2_CLOK1 Putative uncharacterized protein 224 7e-57 >A3DJY3.1 A3DJY3_CLOTH ABC transporter related protein Length = 241 Score = 252 bits (643), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 114/241 (47%), Positives = 170/241 (70%) Query: 1 MESIAKLTGVSKEFHNGRGISGVNLELNMGDIYGLLGPNGAGKTTLLKMLSGLIAPSFGS 60 ME++ ++ G++K + NGRGI +NLE+ GD++G LGPNGAGKTT +K+++GL+ P+ G Sbjct: 1 METVLEIKGLTKLYKNGRGIFDINLEVYRGDVFGFLGPNGAGKTTAMKIMTGLMHPNSGD 60 Query: 61 ISLFGQDLEQSFASSMRKVGCMIESADFYDYVTARQYLKLNASFYPELPPQRIDEVLEAV 120 + +FG + F +M+KVGC+IE+A+ Y Y+T + LKL A FY ++ +RIDEVLE Sbjct: 61 VKIFGHSVITEFEQAMKKVGCIIETAESYAYLTPYENLKLFARFYDDVDDKRIDEVLELT 120 Query: 121 GLAAFAKEKIRHFSTGMKQKLAMASSILHHPEFVIWDEPTNGLDIEGVVHFRALVKQLSG 180 G+ F KEK+++FS GMKQ+L +A++IL PE VI DEP NGLD+EG++ R L+K L+ Sbjct: 121 GILKFKKEKVKNFSLGMKQRLGLAAAILSRPELVILDEPLNGLDVEGMIEIRKLIKALAE 180 Query: 181 EQGITFLISSHMIHELEQLCNRVGILQQGVLVREGNVHELLADNTSLEQYYIAELQKGKE 240 + TF ISSH+IH++E CNR+GIL G LV +L + SLE Y+++E+ K + Sbjct: 181 NEKTTFFISSHLIHDVEITCNRIGILYDGKLVNVDTTENILKNFASLENYFVSEVGKNES 240 Query: 241 L 241 + Sbjct: 241 V 241 >Q894P2.1 Q894P2_CLOTE Transporter Length = 241 Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 106/237 (44%), Positives = 166/237 (70%) Query: 1 MESIAKLTGVSKEFHNGRGISGVNLELNMGDIYGLLGPNGAGKTTLLKMLSGLIAPSFGS 60 ME + ++T ++K + NGRGI+ +NLE+N GDI+G LGPNGAGKTT +K+++GLI+ G Sbjct: 1 MEKVIEITNLNKVYKNGRGITDINLEINRGDIFGFLGPNGAGKTTTMKIMTGLISADSGD 60 Query: 61 ISLFGQDLEQSFASSMRKVGCMIESADFYDYVTARQYLKLNASFYPELPPQRIDEVLEAV 120 + + G + + F +M+KVGC+IE+A+ Y Y+TA + LK + +Y + +RIDEVLE Sbjct: 61 VKILGHSVIEDFEKAMKKVGCIIETAETYQYLTAYENLKQFSRYYKNVDDKRIDEVLELT 120 Query: 121 GLAAFAKEKIRHFSTGMKQKLAMASSILHHPEFVIWDEPTNGLDIEGVVHFRALVKQLSG 180 G+ F EK FS GMKQ+L +A++IL PE VI DEP NGLD+EG++ R ++K L+ Sbjct: 121 GIIKFKNEKAGKFSLGMKQRLGIAAAILSKPEVVILDEPFNGLDVEGMIDMRNIIKNLAK 180 Query: 181 EQGITFLISSHMIHELEQLCNRVGILQQGVLVREGNVHELLADNTSLEQYYIAELQK 237 E+G TF ISSH+IH++E C ++G+L G ++ +L ++ +LE Y+++E+++ Sbjct: 181 EEGNTFFISSHLIHDVELTCTKIGVLYGGKMLNVDTTKNILNNHATLESYFVSEVEQ 237 >Q24WN4.1 Q24WN4_DESHY Putative uncharacterized protein Length = 247 Score = 224 bits (571), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 101/250 (40%), Positives = 170/250 (68%), Gaps = 6/250 (2%) Query: 1 MESIAKLTGVSKEFHNGRGISGVNLELNMGDIYGLLGPNGAGKTTLLKMLSGLIAPSFGS 60 ME + ++ ++K + NGRGI+ ++L++ G+I+G LGPNGAGKTT +K+++GLIAP G Sbjct: 1 MEKVIEIQNLTKLYKNGRGINDLSLDIYEGEIFGFLGPNGAGKTTAMKIMTGLIAPDRGD 60 Query: 61 ISLFGQDLEQSFASSMRKVGCMIESADFYDYVTARQYLKLNASFYPELPPQRIDEVLEAV 120 + +FG + + + +M VGC+IE + Y Y++A L+ A FYP++ QRI+EVLE Sbjct: 61 VKIFGHSILEDYEKAMAHVGCIIEIPETYPYLSAYDNLRQLARFYPDVDGQRIEEVLELT 120 Query: 121 GLAAFAKEKIRHFSTGMKQKLAMASSILHHPEFVIWDEPTNGLDIEGVVHFRALVKQLSG 180 G+ + EK + FS GMKQ+L ++++IL P+ VI DEP NGLD+EG++ R L+ L+ Sbjct: 121 GMLRYKNEKPKRFSLGMKQRLGLSAAILSRPKVVILDEPLNGLDVEGMIDIRKLILYLAE 180 Query: 181 EQGITFLISSHMIHELEQLCNRVGILQQGVLVREGNVHELLADNTSLEQYYIAELQKGKE 240 ++ TF ISSH+IH++E CN++G++ G+L+ ++L + +LE Y+++E+++ Sbjct: 181 QERTTFFISSHLIHDVELTCNKIGVIYNGMLLNVQTTEDILKNYATLENYFVSEVER--- 237 Query: 241 LLDDGRLNRS 250 +GR++ S Sbjct: 238 ---NGRVSSS 244 >B8FYM2.1 B8FYM2_DESHD ABC transporter related Length = 247 Score = 224 bits (571), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 101/250 (40%), Positives = 170/250 (68%), Gaps = 6/250 (2%) Query: 1 MESIAKLTGVSKEFHNGRGISGVNLELNMGDIYGLLGPNGAGKTTLLKMLSGLIAPSFGS 60 ME + ++ ++K + NGRGI+ ++L++ G+I+G LGPNGAGKTT +K+++GLIAP G Sbjct: 1 MEKVIEIQNLTKLYKNGRGINDLSLDIYEGEIFGFLGPNGAGKTTAMKIMTGLIAPDRGD 60 Query: 61 ISLFGQDLEQSFASSMRKVGCMIESADFYDYVTARQYLKLNASFYPELPPQRIDEVLEAV 120 + +FG + + + +M VGC+IE + Y Y++A L+ A FYP++ QRI+EVLE Sbjct: 61 VKIFGHSILEDYEKAMAHVGCIIEIPETYPYLSAYDNLRQLARFYPDVDGQRIEEVLELT 120 Query: 121 GLAAFAKEKIRHFSTGMKQKLAMASSILHHPEFVIWDEPTNGLDIEGVVHFRALVKQLSG 180 G+ + EK + FS GMKQ+L ++++IL P+ VI DEP NGLD+EG++ R L+ L+ Sbjct: 121 GMLRYKNEKPKRFSLGMKQRLGLSAAILSRPKVVILDEPLNGLDVEGMIDIRKLILYLAE 180 Query: 181 EQGITFLISSHMIHELEQLCNRVGILQQGVLVREGNVHELLADNTSLEQYYIAELQKGKE 240 ++ TF ISSH+IH++E CN++G++ G+L+ ++L + +LE Y+++E+++ Sbjct: 181 QERTTFFISSHLIHDVELTCNKIGVIYNGMLLNVQTTEDILKNYATLENYFVSEVER--- 237 Query: 241 LLDDGRLNRS 250 +GR++ S Sbjct: 238 ---NGRVSSS 244 >B9DXV2.1 B9DXV2_CLOK1 Putative uncharacterized protein Length = 241 Score = 224 bits (570), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 103/238 (43%), Positives = 156/238 (65%) Query: 1 MESIAKLTGVSKEFHNGRGISGVNLELNMGDIYGLLGPNGAGKTTLLKMLSGLIAPSFGS 60 ME + +L +SK + NGRGI V+L++ G I+G LGPNGAGKTT +K+++GL+ P G Sbjct: 1 MEKVIELINLSKVYKNGRGIQNVDLDIYRGQIFGFLGPNGAGKTTAMKIMTGLVKPDRGD 60 Query: 61 ISLFGQDLEQSFASSMRKVGCMIESADFYDYVTARQYLKLNASFYPELPPQRIDEVLEAV 120 + + G + + F ++ KVGC+IE+A+ Y Y+TA + L+ + +Y + +I+EVL+ V Sbjct: 61 VKILGYSILEEFEKAIYKVGCIIENAEAYSYLTAFENLRQFSRYYNNIDDTKIEEVLDMV 120 Query: 121 GLAAFAKEKIRHFSTGMKQKLAMASSILHHPEFVIWDEPTNGLDIEGVVHFRALVKQLSG 180 GL + EK FS GMKQ+L +ASSIL PE VI DEP NGLD+EG++ R ++K L+ Sbjct: 121 GLLKYKDEKPEKFSLGMKQRLGIASSILCDPEIVILDEPLNGLDVEGMIDVRNIIKNLAE 180 Query: 181 EQGITFLISSHMIHELEQLCNRVGILQQGVLVREGNVHELLADNTSLEQYYIAELQKG 238 + TF ISSH+IH++E C +G+L G L+ +L + SLE Y+I+E+ + Sbjct: 181 NKNTTFFISSHLIHDIELTCTHIGVLYNGNLINVDTTKNILNNYASLENYFISEVDRN 238 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,462,566,526 Number of extensions: 59124786 Number of successful extensions: 467769 Number of sequences better than 1.0e-05: 87076 Number of HSP's gapped: 388262 Number of HSP's successfully gapped: 92287 Length of query: 251 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 119 Effective length of database: 1,817,122,223 Effective search space: 216237544537 Effective search space used: 216237544537 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)