BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0032.p (206 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2PX61.1 C2PX61_BACCE Integral membrane protein 213 7e-54 C2XVL1.1 C2XVL1_BACCE Integral membrane protein 207 6e-52 C0ZDY2.1 C0ZDY2_BREBN Hypothetical membrane protein 198 3e-49 Q0RL00.1 Q0RL00_FRAAA Putative integral membrane protein 188 3e-46 Q82RL2.1 Q82RL2_STRAW Putative integral membrane protein 186 1e-45 >C2PX61.1 C2PX61_BACCE Integral membrane protein Length = 278 Score = 213 bits (542), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 107/150 (71%), Positives = 117/150 (78%) Query: 5 QLWNKVPQVTIFFWIIKIMATTVGETAADFLNFNLNWGXXXXXXXXXXXXXISLFFQMSA 64 Q+ NKVP++TIFFWIIKIMATTVGET ADFLN NLN+G I+LFFQ Sbjct: 30 QMLNKVPEITIFFWIIKIMATTVGETGADFLNTNLNFGLTKTTFVMSALLLITLFFQFRL 89 Query: 65 TKYVPSMYWLAVVLISVVGTLITDNLVDNLGVPLETTTIFFSLALAMTFVAWYASEKMLS 124 KYVP +YWL V+LISVVGTL+TDNL DN GV LETTTI F+L+L TF AWY SEK LS Sbjct: 90 KKYVPGIYWLTVLLISVVGTLVTDNLTDNFGVALETTTIVFTLSLMATFAAWYVSEKTLS 149 Query: 125 IHSITTKKREAFYWLAILFTFALGTAAGDL 154 IHSI T KREAFYWLAILFTFALGTAAGDL Sbjct: 150 IHSIYTTKREAFYWLAILFTFALGTAAGDL 179 >C2XVL1.1 C2XVL1_BACCE Integral membrane protein Length = 278 Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 105/150 (70%), Positives = 115/150 (76%) Query: 5 QLWNKVPQVTIFFWIIKIMATTVGETAADFLNFNLNWGXXXXXXXXXXXXXISLFFQMSA 64 Q+ +KVP+VTIFFWIIKIMATTVGET ADFLN NLN+G I+LFFQ Sbjct: 30 QMLSKVPEVTIFFWIIKIMATTVGETGADFLNTNLNFGLTKTTFVMSALLFITLFFQFRL 89 Query: 65 TKYVPSMYWLAVVLISVVGTLITDNLVDNLGVPLETTTIFFSLALAMTFVAWYASEKMLS 124 KYVPS+YWL V+LISVVGTL+TDNL DN + LETTTI F+L L TF AWY SEK LS Sbjct: 90 KKYVPSVYWLTVLLISVVGTLVTDNLTDNFRIALETTTIVFTLLLLATFTAWYVSEKTLS 149 Query: 125 IHSITTKKREAFYWLAILFTFALGTAAGDL 154 IHSI T KRE FYWLAILFTFALGTAAGDL Sbjct: 150 IHSIYTTKREVFYWLAILFTFALGTAAGDL 179 >C0ZDY2.1 C0ZDY2_BREBN Hypothetical membrane protein Length = 529 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 98/149 (65%), Positives = 113/149 (75%) Query: 6 LWNKVPQVTIFFWIIKIMATTVGETAADFLNFNLNWGXXXXXXXXXXXXXISLFFQMSAT 65 L +KVP+VTIFFWIIK++ TTVGET ADFLNFNL +G I LF Q AT Sbjct: 22 LQSKVPEVTIFFWIIKVLCTTVGETFADFLNFNLGFGLMFTTATMGITFFIVLFLQFRAT 81 Query: 66 KYVPSMYWLAVVLISVVGTLITDNLVDNLGVPLETTTIFFSLALAMTFVAWYASEKMLSI 125 KY+P +YW+ VVLISV GTL+TDNL DN+GVPLET+T FS+ L +TF+ WY SEK LSI Sbjct: 82 KYIPGIYWVTVVLISVFGTLVTDNLTDNVGVPLETSTAVFSVLLGLTFLFWYRSEKTLSI 141 Query: 126 HSITTKKREAFYWLAILFTFALGTAAGDL 154 HSI T+KRE FYWL ILFTFALGTA GDL Sbjct: 142 HSIYTRKREVFYWLTILFTFALGTAIGDL 170 >Q0RL00.1 Q0RL00_FRAAA Putative integral membrane protein Length = 280 Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 101/151 (66%), Positives = 114/151 (75%) Query: 4 RQLWNKVPQVTIFFWIIKIMATTVGETAADFLNFNLNWGXXXXXXXXXXXXXISLFFQMS 63 R NKVPQVTIFFWIIK++ TT+GETAADFLN NL G ++LFFQ Sbjct: 23 RTTLNKVPQVTIFFWIIKVLCTTIGETAADFLNSNLGLGLTNTTYVMGALLVVALFFQFR 82 Query: 64 ATKYVPSMYWLAVVLISVVGTLITDNLVDNLGVPLETTTIFFSLALAMTFVAWYASEKML 123 +YVP +YWLAVVLISVVGTLITDNL DN GVPLE TT F++ALA TF AW+A E+ L Sbjct: 83 QERYVPWVYWLAVVLISVVGTLITDNLTDNAGVPLEVTTAVFAVALAATFAAWFAVERTL 142 Query: 124 SIHSITTKKREAFYWLAILFTFALGTAAGDL 154 SIH+I T +RE FYWLAILFTFALGTAAGDL Sbjct: 143 SIHTILTTRREGFYWLAILFTFALGTAAGDL 173 >Q82RL2.1 Q82RL2_STRAW Putative integral membrane protein Length = 276 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 89/153 (58%), Positives = 108/153 (70%) Query: 2 NERQLWNKVPQVTIFFWIIKIMATTVGETAADFLNFNLNWGXXXXXXXXXXXXXISLFFQ 61 R WNKVP+VT++FW+IK++ TTVGETAAD LN G + L Q Sbjct: 20 GHRLRWNKVPEVTVYFWVIKVLCTTVGETAADLLNEKAGLGLTGVSLLMSVLLAVILVVQ 79 Query: 62 MSATKYVPSMYWLAVVLISVVGTLITDNLVDNLGVPLETTTIFFSLALAMTFVAWYASEK 121 T Y P YW AV LISVVGTL++DNL DN+G+PLETTT F++ LA+ FVAWY SE+ Sbjct: 80 FRTTAYRPGAYWTAVALISVVGTLVSDNLTDNMGIPLETTTAVFAVLLAVVFVAWYRSER 139 Query: 122 MLSIHSITTKKREAFYWLAILFTFALGTAAGDL 154 LSIHSI T +RE+FYWLA+LFTFALGT+AGDL Sbjct: 140 TLSIHSIDTLRRESFYWLAVLFTFALGTSAGDL 172 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.327 0.138 0.449 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,062,297,543 Number of extensions: 34668471 Number of successful extensions: 93701 Number of sequences better than 1.0e-05: 174 Number of HSP's gapped: 93382 Number of HSP's successfully gapped: 175 Length of query: 206 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 77 Effective length of database: 1,845,385,268 Effective search space: 142094665636 Effective search space used: 142094665636 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 128 (53.9 bits)