BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0025.p (888 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A0PYY7.1 A0PYY7_CLONN Lysyl transferase 628 e-178 B1B753.1 B1B753_CLOBO Lysyl transferase 624 e-176 B1DBJ4.1 B1DBJ4_9BACL Putative uncharacterized protein 521 e-145 C2YP86.1 C2YP86_BACCE Lysylcardiolipin synthase / Lysyltransferase 475 e-131 Q3ESK5.1 Q3ESK5_BACTI Lysylcardiolipin synthase / Lysyltransfera... 473 e-131 >A0PYY7.1 A0PYY7_CLONN Lysyl transferase Length = 869 Score = 628 bits (1619), Expect = e-178, Method: Compositional matrix adjust. Identities = 342/853 (40%), Positives = 487/853 (57%), Gaps = 22/853 (2%) Query: 22 RYKLVQIIIPAAVILFIYWEGQKEFRRIDWAGTLHTLHHMKPATVLLLFGFALIAVATVS 81 +YKL++II+ ++ IY EG+ + +L+ LH + L F +IAV + Sbjct: 16 KYKLLKIILSITALIIIYSEGKIALNNFNVGISLYYLHTALRSRGWLFFVAGIIAVGATT 75 Query: 82 LYDFVLRRHFQIPLSFWETFRYSWIANTSNSVIGFSGIAGAALRTFLYRKRKIPAQTITA 141 LYD+ + +H + LS + + SWI+NT N+ +GF+G+ G+ LRT Y+K I ++ Sbjct: 76 LYDYFVVKHLKYSLSIKKVLKISWISNTFNNFLGFAGLTGSGLRTVFYKKEDIESKDAIY 135 Query: 142 SIAFLSTITITGLSVLSWAGILGILPMQPVLQSHPWTIYAVWAAALYLPGYLILQRTSFY 201 + ++ T+ GLSVL+W G+ I+ ++P+L H + +A+ +Y+ YL+L F Sbjct: 136 INSLINPATLVGLSVLAWLGVFNIITIKPILFLHKFLWFAIIGFQIYIVIYLLL----FK 191 Query: 202 AKWLNRNLPXXXXMDAATIAASVG---ASLLEWAFAGISFWLIGSCFLPALSLAQALGIY 258 WL +G SLLEW AG W I F ++ +ALG+ Sbjct: 192 IPWLKSEFLSKDTSVKEPKKIRIGLIFVSLLEWISAGSFIWFISYFFTNHITYGEALGVI 251 Query: 259 TLSAITGLLSMAPGGIGGFDLTALLGLQQLGYPSGKTXXXXXXXXXXXXXXPWGIGLVLA 318 T++ G++S+ PGGIG FDL GLQ +G + PW +G+VL+ Sbjct: 252 TVAGAAGIISLLPGGIGAFDLVCARGLQLMGTTPNEAVAILIIYRMFYYIIPWFLGVVLS 311 Query: 319 AFDFARGREGEDGRDNAGYESVLNNWQKIWLFPTRLGVVGEIGAWSLGKLVFASGIVLLL 378 R+ + L+NWQK+W+ + + G +L LVF G+VLL+ Sbjct: 312 L------RDMREVLPTTVIPRTLSNWQKVWV--KNYKEISDFGVIALSVLVFLCGVVLLI 363 Query: 379 SAATPGLXXXXNRLQFAEELLSAPLMRLSHQXXXXXXXXXXXXXXXXXHRVKRAYRLTLF 438 SAA P + R++ +L S MR SH+ +KRAY LT+ Sbjct: 364 SAAVPSVS---QRVKIISKLTSFTFMRFSHRISIIIGVMLVVLSKGIREHLKRAYSLTIV 420 Query: 439 FLCAGALFTFTKAFDFEEAIFLLIVALLLWISRNRFFRVATPVDPGKAALWGLVTLLAAY 498 L G+LFTFTK D+EEAIFLLIVA LL SR ++R + PV + LV+ ++ Sbjct: 421 LLLVGSLFTFTKGLDYEEAIFLLIVAALLRFSRKGYYRESVPVKGITVFIMILVSAVSIG 480 Query: 499 VYDLIATGIPPAI--LKHWPSNAKLMWLINPKQHAAAAIAGLVMAWLLITLFFILRPNRL 556 Y ++ I A K+ P ++ I KQ AI ++AW+++T++FIL+P R Sbjct: 481 FYAMLGHSISFAFTGFKNGPKVFEI--FITRKQFTCNAIYAFILAWVILTIYFILKPKRP 538 Query: 557 TNKGASDAELARLRKFLEHEQGNLLTHVLFAGDKSFFWACNDQVLIPYAIVRREFVVLGD 616 + SD ++ +L++FL+ +GN LTH+LF DK+F+WA +VLI YA +R + V+LGD Sbjct: 539 FDIKVSDEDIDKLKEFLKKYEGNYLTHLLFMRDKNFYWAQEGKVLIAYANIRDKLVILGD 598 Query: 617 PIGKENLVSEAIQESQRFADLYDLTVVFYQVSPHYLPIYHENGYRFFKLGEEALVSLEHF 676 PIG E +AI+E Q FAD Y L VFYQV+ Y+ YHENGY FFKLGEEA+V LE F Sbjct: 599 PIGDEKYFQKAIEEIQIFADKYALYPVFYQVAEKYITTYHENGYYFFKLGEEAVVDLEKF 658 Query: 677 TLSGKPSASLRSVTNRFEREGFRFEVVQPPHPEDLMKQLYEISQKWLDGKKEKGFSLGWF 736 L GK LR V NRFE+E FE++ PP ++M L EIS +WL+G+KEKGFSLG F Sbjct: 659 NLEGKKRKDLRLVRNRFEKENMEFEIIDPPFSGEVMGTLKEISDQWLNGRKEKGFSLGAF 718 Query: 737 DEDYXXXXXXXXXXXPNGEIIAFASLAPGYDNGNTLSVDLMRNLPVKPNGTMDHLFVSLL 796 DE Y + EIIAFA++ P YDNG T+S+DLMR + PNGTMD LF+ ++ Sbjct: 719 DEKYINTAPVAILKNSDKEIIAFATMMPKYDNGKTISIDLMRFVNDAPNGTMDTLFLKIM 778 Query: 797 KWAKEQGYAYFNLGMAPLSSVGQTQSAIREEKLAHLVFKHGGHWYGFLGLRKYKEKFSPV 856 W+KE GY YFNLGMAPLS+VG A ++EKLA LV+K G +WY F GLR+YKEKF+P Sbjct: 779 LWSKENGYKYFNLGMAPLSNVGVAPFAHKQEKLAKLVYKFGNYWYSFSGLRRYKEKFTPN 838 Query: 857 WEPRYLAYPSQVS 869 WE R+LAYP +S Sbjct: 839 WESRFLAYPQFMS 851 >B1B753.1 B1B753_CLOBO Lysyl transferase Length = 869 Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust. Identities = 335/851 (39%), Positives = 483/851 (56%), Gaps = 18/851 (2%) Query: 22 RYKLVQIIIPAAVILFIYWEGQKEFRRIDWAGTLHTLHHMKPATVLLLFGFALIAVATVS 81 +YKL++II+ ++ IY EG++ + L+ LH + L F +IAV T + Sbjct: 16 KYKLLKIILSITALIIIYSEGKRALNNFNIGIALYYLHTALKSRGWLFFIVGIIAVGTTT 75 Query: 82 LYDFVLRRHFQIPLSFWETFRYSWIANTSNSVIGFSGIAGAALRTFLYRKRKIPAQTITA 141 YD+ + +H + LS + + SWIANT N+ +GF+G+ G+ LRT Y+K I A+ Sbjct: 76 FYDYFVVKHLKYNLSIKKILKISWIANTFNNFLGFAGLTGSGLRTVFYKKEDIEAEEAIY 135 Query: 142 SIAFLSTITITGLSVLSWAGILGILPMQPVLQSHPWTIYAVWAAALYLPGYLILQRTSFY 201 + ++ T+ GLS+L+W G+ I+ ++P+L H + +A+ +Y+ YL+L F Sbjct: 136 INSLVNPATLVGLSILAWLGVFNIITIKPILFLHKFLWFAIIGFQIYIIIYLLL----FK 191 Query: 202 AKWLNRNLPXXXXMDAATIAASVG---ASLLEWAFAGISFWLIGSCFLPALSLAQALGIY 258 WL +G SL+EW AG W I F ++ +ALG+ Sbjct: 192 IPWLKSEFLSKDTSVKEPKKVRIGLIFVSLVEWVIAGSFIWFISYFFTNHITYGEALGVI 251 Query: 259 TLSAITGLLSMAPGGIGGFDLTALLGLQQLGYPSGKTXXXXXXXXXXXXXXPWGIGLVLA 318 T++ G++S+ PGGIG FDL GLQ +G + PW +G++L+ Sbjct: 252 TVAGAAGIISLLPGGIGAFDLVCARGLQLMGTTPNEAVAILIIYRMFYYIIPWFLGVILS 311 Query: 319 AFDFARGREGEDGRDNAGYESVLNNWQKIWLFPTRLGVVGEIGAWSLGKLVFASGIVLLL 378 R+ + L+NWQK+W+ + + G +L LVF G+VLL Sbjct: 312 L------RDMREVLPTTVIPRTLSNWQKVWV--KNYKEISDFGVIALSVLVFLCGVVLLA 363 Query: 379 SAATPGLXXXXNRLQFAEELLSAPLMRLSHQXXXXXXXXXXXXXXXXXHRVKRAYRLTLF 438 SAA P + R++ +L S MR SH+ +KRAY LT+ Sbjct: 364 SAAVPSVS---QRIKIISKLTSFTFMRFSHRVSIIIGVMLVVLSKGIREHLKRAYSLTIV 420 Query: 439 FLCAGALFTFTKAFDFEEAIFLLIVALLLWISRNRFFRVATPVDPGKAALWGLVTLLAAY 498 L G+LFTF K D+EEAIFLLIVA LL SR ++R + PV L++ ++ Sbjct: 421 LLLVGSLFTFAKGLDYEEAIFLLIVAALLRFSRKGYYRESAPVKGFTVFFMILISAISIG 480 Query: 499 VYDLIATGIPPAILKHWPSNAKLMWLINPKQHAAAAIAGLVMAWLLITLFFILRPNRLTN 558 +Y ++ I A I KQ AI ++AW+++T++FIL+P R + Sbjct: 481 LYAMLGHSISFAFTGFRNGPKVFEIFITRKQFTCNAIYAFILAWIILTIYFILKPKRPFD 540 Query: 559 KGASDAELARLRKFLEHEQGNLLTHVLFAGDKSFFWACNDQVLIPYAIVRREFVVLGDPI 618 SD ++ RL++FL+ +GN LTH+LF DKSF+WA +VLI YA +R + V+LGDPI Sbjct: 541 IKVSDEDIDRLKEFLKKYEGNYLTHLLFMRDKSFYWAQGGKVLISYANIRDKLVILGDPI 600 Query: 619 GKENLVSEAIQESQRFADLYDLTVVFYQVSPHYLPIYHENGYRFFKLGEEALVSLEHFTL 678 G E +AI+E Q FAD Y L VFYQVS Y+ YHENGY FFKLGEEA+V LE F L Sbjct: 601 GNEEYFQKAIEEIQIFADRYALYPVFYQVSEKYITTYHENGYYFFKLGEEAVVDLEKFNL 660 Query: 679 SGKPSASLRSVTNRFEREGFRFEVVQPPHPEDLMKQLYEISQKWLDGKKEKGFSLGWFDE 738 GK LR V NRFE+E F++++PP ++M++L +IS +WL+G+KEKGFSLG FD+ Sbjct: 661 EGKKRKDLRLVRNRFEKENMEFDILEPPFSREIMEKLKKISDEWLNGRKEKGFSLGAFDK 720 Query: 739 DYXXXXXXXXXXXPNGEIIAFASLAPGYDNGNTLSVDLMRNLPVKPNGTMDHLFVSLLKW 798 +Y + EIIAFA++ P YDNG T+S+DLMR PNGTMD LF+ ++ W Sbjct: 721 EYINSAPVAILKDTDKEIIAFATMMPKYDNGKTISIDLMRFTKDAPNGTMDTLFLKIMLW 780 Query: 799 AKEQGYAYFNLGMAPLSSVGQTQSAIREEKLAHLVFKHGGHWYGFLGLRKYKEKFSPVWE 858 +K+ GY YFNLGMAPLS+VG A ++EKLA LV+K G +WY F GLR+YKEKF+P WE Sbjct: 781 SKDNGYKYFNLGMAPLSNVGVAPFAHKQEKLAKLVYKFGNYWYSFSGLRRYKEKFTPNWE 840 Query: 859 PRYLAYPSQVS 869 ++LAYP +S Sbjct: 841 SKFLAYPQFMS 851 >B1DBJ4.1 B1DBJ4_9BACL Putative uncharacterized protein Length = 879 Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust. Identities = 318/853 (37%), Positives = 460/853 (53%), Gaps = 13/853 (1%) Query: 22 RYKLV-QIIIPAAVILFIYWEGQKEFRRIDWAGTLHTLHHMKPATVLLLFGFALIAVATV 80 R+K V +++ P A++LF+Y + + I A LH L H+ + L L +AVA + Sbjct: 11 RFKNVFKLLFPVAILLFLYTQTSGFIKEIKPAAALHLLKHLHWSDHLQLAAVCFLAVAVM 70 Query: 81 SLYDFVLRRHFQIPLSFWETFRYSWIANTSNSVIGFSGIAGAALRTFLYRKRKIPAQTIT 140 S YDF L R Q + + + SWIAN+ N+ +GF+G+ GA LR LYRK I Sbjct: 71 SAYDFTLVRWNQARMPWTAVLKISWIANSFNNAMGFAGLTGAGLRITLYRKWGIQGPAWL 130 Query: 141 ASIAFLSTITITGLSVLSWAGILGILPMQPVLQSHPWTIYAVWAAALYLPGYLILQRTSF 200 S+ + S +TGLS+LS ++G+ + +L H W AV A+Y + +L R Sbjct: 131 RSLVYQSLSALTGLSILSILLLVGVWNDRSLLAHHLWLYLAVILIAVYAVLFALLGRLPR 190 Query: 201 YAKWL---NRNLPXXXXMDAATIAASVGASLLEWAFAGISFWLIGSCFLPALSLAQALGI 257 L ++ + + SL EW AG+SFWLI + +A+ I Sbjct: 191 LRNLLGLTDKEQEDEVSLSKPPALRMITTSLAEWLMAGLSFWLIIHLMYLPIGFREAMSI 250 Query: 258 YTLSAITGLLSMAPGGIGGFDLTALLGLQQLGYPSGKTXXXXXXXXXXXXXXPWGIGLVL 317 Y ++A+ G+ S P G+G FD LL Q LG + PW +GL L Sbjct: 251 YVVAAVAGVASFVPSGLGSFDAIVLLAFQHLGLSPDQGLAVLVLYRIFYCFLPWAVGLAL 310 Query: 318 AAFDFARGREGEDGRDNAGYESVLNNWQKIWLFPTRLGVVGEIGAWSLGKLVFASGIVLL 377 A ++ +E + + + W IW +P++ V+ +I W+L LVF SGI+LL Sbjct: 311 ATTEWIPSKERWNQTQEQVLKPAIKRWHTIWNWPSQTAVLSDISTWALSALVFISGILLL 370 Query: 378 LSAATPGLXXXXNRLQFAEELLSAPLMRLSHQXXXXXXXXXXXXXXXXXHRVKRAYRLTL 437 +S+ATPG +R+Q E+ ++ M+ SHQ RVKRAY L + Sbjct: 371 VSSATPG---SWHRMQLLEQFVTPFTMKGSHQLAVLIGLLMLMVSEGIRFRVKRAYFLAM 427 Query: 438 FFLCAGALFTFTKAFDFEEAIFLLIVALLLWISRNRFFRVATPVDPGKAALWGLVTLLAA 497 L G K F+FEEAIFLL V LLLW+S++RF R + K W ++L+ Sbjct: 428 ILLIGGTFALILKGFEFEEAIFLLFVCLLLWLSKDRFNRKESIFTLRKTIGWAGISLIVM 487 Query: 498 YVY---DLIATGIPPAILKHWPSNAKLMWLINPKQHAAAAIAGLVMAWLLITLFFILRPN 554 +Y + +PP + H +A+ + + ++ I L ++W+L+T+ I P+ Sbjct: 488 LLYLSVGISTNELPPGMFHHAKWHAR--YTLKDEELLREGIIALAVSWILLTVRRIFVPS 545 Query: 555 RLTNKGASDAELARLRKFLEHEQGNLLTHVLFAGDKSFFWACNDQVLIPYAIVRREFVVL 614 + RL + L GN LTH+L+ GDKSF W+ ++Q ++ Y + + V L Sbjct: 546 LPPAPKPGPQDWERLEQLLAKHPGNFLTHLLYMGDKSFMWSPDNQAVLSYGRIGKTLVAL 605 Query: 615 GDPIGKENLVSEAIQESQRFADLYDLTVVFYQVSPHYLPIYHENGYRFFKLGEEALVSLE 674 GDPIG V + +++ + +AD Y T VFYQV LP+YHE GYRFFKLGEEA+V LE Sbjct: 606 GDPIGDPASVRQLVRQFRDYADHYAATAVFYQVKAENLPLYHEYGYRFFKLGEEAIVPLE 665 Query: 675 HFTLSGKPSASLRSVTNRFEREGFRFEVVQPPHPEDLMKQLYEISQKWLDGKKEKGFSLG 734 F LSG+ A LR+ NR+ER GF F++ +PP L+ +L +S +WL+ KEKGFSLG Sbjct: 666 QFQLSGRRKADLRAACNRYERNGFTFDIAKPPFSTMLLSELKAVSDEWLEDDKEKGFSLG 725 Query: 735 WFDEDYXXXXXXXXXXXPNGEIIAFASLAPGYDNGNTLSVDLMRNLPVKPNGTMDHLFVS 794 F E Y + AFAS+ P YD+ ++S+DLMR+ +G MD LFV Sbjct: 726 TFSESYLELAPIAVLRDNENRVAAFASIMPVYDHHKSVSIDLMRHRD-GLSGVMDVLFVH 784 Query: 795 LLKWAKEQGYAYFNLGMAPLSSVGQTQSAIREEKLAHLVFKHGGHWYGFLGLRKYKEKFS 854 LL+WAK +GY FNLGMAPLSSVG++ A R EKLA VF GGH+YGF G+R++K+KF Sbjct: 785 LLQWAKSEGYEIFNLGMAPLSSVGESVYAYRGEKLARWVFLKGGHFYGFQGIRRFKDKFD 844 Query: 855 PVWEPRYLAYPSQ 867 P WEPRYLA+P Sbjct: 845 PEWEPRYLAFPQN 857 >C2YP86.1 C2YP86_BACCE Lysylcardiolipin synthase / Lysyltransferase Length = 860 Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust. Identities = 298/869 (34%), Positives = 450/869 (51%), Gaps = 31/869 (3%) Query: 27 QIIIPAAVILFIYWEGQKEFRRIDWAGTLHTLHHMKPATVLLLFGFALIAVATVSLYDFV 86 +II P V+ ++++ +KE I + ++T+ ++ V L AV+T+ YD+V Sbjct: 13 KIIFPFVVLTIVFFQAKKELAGISFLEAINTIKNIPTGGVFLAITLGAFAVSTMFFYDYV 72 Query: 87 LRRHFQIPLSFWETFRYSWIANTSNSVIGFSGIAGAALRTFLYRKRKIPAQTITASIAFL 146 + R+ + + + FR SWIANT N IGF G+ GA +RT LYR + SIA++ Sbjct: 73 MLRYLKADIPVQKIFRISWIANTLNGFIGFGGLVGAGVRTMLYRPYIKENGKLIKSIAWM 132 Query: 147 STITITGLSVLSWAGILGILPMQPVLQSHPWTIYAVWAAALYLPGYLILQRTSFYAKWLN 206 +T I GL++LS+ G++GIL +L PW + AL++P Y+ ++K N Sbjct: 133 TTAFINGLAILSFLGLIGILDTSFILHEKPWLWPVLIFFALFVPIYI------GFSKLKN 186 Query: 207 RNLPXXXXMDAA-----TIAASVGASLLEWAFAGISFWLIGSCFLPALSLAQALGIYTLS 261 R + A T+ S+ SL+EW AGI ++I F + + LG+Y ++ Sbjct: 187 RKTNQTEGQEEAEEKNPTVLYSL-VSLVEWVSAGIVMYVILILFGIDIEFQKFLGVYVIA 245 Query: 262 AITGLLSMAPGGIGGFDLTALLGLQQLGYPSGKTXXXXXXXXXXXXXXPWGIGLVLAAFD 321 A+ G++S+ PGG+G FDL L GL Q G +G P+ +GL+ AAF+ Sbjct: 246 ALAGVVSLVPGGLGSFDLVFLTGLGQYGIDTGVLLPAMLLYRLVYYILPFCLGLIFAAFE 305 Query: 322 FARGREGEDGRDNAGYESVLNNWQKIWLFPTRLGVVGEIGAWSLGKLVFASGIVLLLSAA 381 G + D L IW +G++G+W+ L +G++++LS Sbjct: 306 MT-GVAIKKFEDKPFIAPALETTGVIWTLQRDF--LGKLGSWASAALTVFAGLMVILSTI 362 Query: 382 TPGLXXXXNRLQFAEELLSAPLMRLSHQXXXXXXXXXXXXXXXXXHRVKRAYRLTLFFLC 441 P NR L PL++ S + KR+Y +T+ L Sbjct: 363 LP---TSINRAHALHILAPKPLIQFSFSLSLTFGILLLILSRGIYYGTKRSYYMTIISLI 419 Query: 442 AGALFTFTKAFDFEEAIFLLIVALLLWISRNRFFRVATPV---DPGKAALWGLVTLLAAY 498 A+F K D EE LLIV +L++ R RF R V D K ++ L+TL Y Sbjct: 420 GAAIFNTLKGIDIEETFILLIVLAVLYMLRKRFVREKMEVSLSDMVKVFIFLLITL---Y 476 Query: 499 VYDLIATGIPPAILKHWPSNAKLMWLINPKQHAAAAIAGLVMAWLLITLFFILRPNRLTN 558 +Y + GI A K ++ I + +A A A V +LLI L NR N Sbjct: 477 LYKNL--GILFAGAKEAFKPDFVVRNITQVKRSALAAAFFVPTFLLIG---SLIANRYRN 531 Query: 559 K-GASDAELARLRKFLEHEQGNLLTHVLFAGDKSFFWACNDQVLIPYAIVRREFVVLGDP 617 + A RL+ FL+ GN+L+H+ F GDK FF++ + + L+ ++I + VVLGDP Sbjct: 532 EFPGQPANDKRLQNFLDEHDGNVLSHLGFLGDKQFFFSSDGKALLLFSITGKRLVVLGDP 591 Query: 618 IGKENLVSEAIQESQRFADLYDLTVVFYQVSPHYLPIYHENGYRFFKLGEEALVSLEHFT 677 IG + +QE AD + VFYQ+ ++ +YH+ GY FFKLGEEA+V L FT Sbjct: 592 IGDPSSYRTVLQEFLAEADRFGYICVFYQIESKWMSLYHDFGYNFFKLGEEAVVDLNTFT 651 Query: 678 LSGKPSASLRSVTNRFEREGFRFEVVQPPHPEDLMKQLYEISQKWLDGKKEKGFSLGWFD 737 ++GK A +R+ NRFEREG+ F + QPP ++L ++L ++S+ WL GKKEKGFSLG+FD Sbjct: 652 ITGKKRAGMRATFNRFEREGYTFSIHQPPFSDELYEELKKVSEAWLGGKKEKGFSLGYFD 711 Query: 738 EDYXXXXXXXXXXXPNGEIIAFASLAPGYDNGNTLSVDLMRNLPVKPNGTMDHLFVSLLK 797 +Y +G+ IAF + P Y +G +LSVDLMR P P+G MD +F+ L + Sbjct: 712 REYISRAPIATLSDADGKTIAFTTFMPVYQDG-SLSVDLMRYYPDAPSGIMDAIFIHLFQ 770 Query: 798 WAKEQGYAYFNLGMAPLSSVGQTQSAIREEKLAHLVFKHGGHWYGFLGLRKYKEKFSPVW 857 WAKE Y FN+GMAPLS+VG + + E++A +F + + Y F GLR +KEK+ P W Sbjct: 771 WAKENEYHSFNIGMAPLSNVGLSTQSFWSERVAAAIFNNVRYTYSFSGLRHFKEKYKPAW 830 Query: 858 EPRYLAYPSQVSXXXXXXXXXXXIARRPN 886 +YLA+ S I +R N Sbjct: 831 SGKYLAFRKNHSLPITMLSVTKLIGKRKN 859 >Q3ESK5.1 Q3ESK5_BACTI Lysylcardiolipin synthase / Lysyltransferase EC=2.3.2.- EC=2.3.2.3 Length = 879 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 298/868 (34%), Positives = 448/868 (51%), Gaps = 30/868 (3%) Query: 27 QIIIPAAVILFIYWEGQKEFRRIDWAGTLHTLHHMKPATVLLLFGFALIAVATVSLYDFV 86 +II P V+ ++++ +KE I + + T+ ++ V L AV+T+ YD+V Sbjct: 33 KIIFPFVVLTIVFFQAKKELAGISFLEAIDTIKNIPTGGVFLAITLGAFAVSTMFFYDYV 92 Query: 87 LRRHFQIPLSFWETFRYSWIANTSNSVIGFSGIAGAALRTFLYRKRKIPAQTITASIAFL 146 + R+ + + + FR SWIANT N IGF G+ GA +RT LYR + SIA++ Sbjct: 93 MLRYLKADIPVQKIFRISWIANTLNGFIGFGGLVGAGVRTMLYRPYIKENGKLIKSIAWM 152 Query: 147 STITITGLSVLSWAGILGILPMQPVLQSHPWTIYAVWAAALYLPGYLILQRTSFYAKWLN 206 +T I GL++LS+ G++GIL + +L PW + AL++P Y+ ++K N Sbjct: 153 TTAFINGLAILSFLGLIGILDTRFILHEKPWLWPVLIFFALFVPIYI------GFSKLKN 206 Query: 207 RNLPXXXXMDAA----TIAASVGASLLEWAFAGISFWLIGSCFLPALSLAQALGIYTLSA 262 R + T+ S+ SL+EW AGI ++I F + + LG+Y ++A Sbjct: 207 RKAMQTEGQEEEEKNPTVLYSL-VSLVEWVSAGIVMYVILLLFGIEIEFQKFLGVYVIAA 265 Query: 263 ITGLLSMAPGGIGGFDLTALLGLQQLGYPSGKTXXXXXXXXXXXXXXPWGIGLVLAAFDF 322 + G++S+ PGG+G FDL L GL Q G +G P+ +GL+ AAF+ Sbjct: 266 LAGVVSLVPGGLGSFDLVFLTGLGQYGIDTGVLLPAMLLYRLVYYILPFCLGLIFAAFEM 325 Query: 323 ARGREGEDGRDNAGYESVLNNWQKIWLFPTRLGVVGEIGAWSLGKLVFASGIVLLLSAAT 382 G + D L IW +G++G+W+ L +G++++LS Sbjct: 326 T-GVAIKKFEDKPFIAPALETTGVIWTLQRDF--LGKLGSWASAALTVFAGLMVILSTIL 382 Query: 383 PGLXXXXNRLQFAEELLSAPLMRLSHQXXXXXXXXXXXXXXXXXHRVKRAYRLTLFFLCA 442 P NR L L++ S + KR+Y +T+ L Sbjct: 383 P---TSINRAHALHILAPKHLIQFSFSLSLTFGILLLILSRGIYYGTKRSYYMTIVSLIG 439 Query: 443 GALFTFTKAFDFEEAIFLLIVALLLWISRNRFFRVATPV---DPGKAALWGLVTLLAAYV 499 A+F K D EE LLIV +L++ R RF R V D K ++ LVTL Y+ Sbjct: 440 AAIFNTLKGIDVEETFILLIVLAVLYMLRKRFVREKMEVSLSDIVKVFIFLLVTL---YL 496 Query: 500 YDLIATGIPPAILKHWPSNAKLMWLINPKQHAAAAIAGLVMAWLLITLFFILRPNRLTNK 559 Y + GI A K ++ I + +A A A V +LLI L NR N+ Sbjct: 497 YKNL--GILFASAKEAFQPDFVVRNITQVKRSALAAAFFVPTFLLIG---SLIANRYRNE 551 Query: 560 -GASDAELARLRKFLEHEQGNLLTHVLFAGDKSFFWACNDQVLIPYAIVRREFVVLGDPI 618 A RL+ FL+ GN+L+H+ F GDK FF++ + + LI ++I + +VLGDPI Sbjct: 552 FPGQPANDKRLQNFLDEHGGNVLSHLGFLGDKQFFFSSDGKALILFSITGKRLIVLGDPI 611 Query: 619 GKENLVSEAIQESQRFADLYDLTVVFYQVSPHYLPIYHENGYRFFKLGEEALVSLEHFTL 678 G + +QE AD + VFYQ+ ++ +YH+ GY FFKLGEEA+V L FT+ Sbjct: 612 GDPSSYRTVLQEFLAVADRFGYICVFYQIESKWMSLYHDFGYNFFKLGEEAVVDLNTFTI 671 Query: 679 SGKPSASLRSVTNRFEREGFRFEVVQPPHPEDLMKQLYEISQKWLDGKKEKGFSLGWFDE 738 +GK A +R+ NRFEREG+ F + +PP ++L ++L ++S WL GKKEKGFSLG+FD Sbjct: 672 TGKKRAGMRATFNRFEREGYTFSIHEPPFSDELYEELRKVSDAWLGGKKEKGFSLGYFDR 731 Query: 739 DYXXXXXXXXXXXPNGEIIAFASLAPGYDNGNTLSVDLMRNLPVKPNGTMDHLFVSLLKW 798 +Y +G+IIAF + P Y NG +LSVDLMR P P+G MD +F+ L +W Sbjct: 732 EYISRAPIATLSDADGKIIAFTTFMPVYQNG-SLSVDLMRYYPDAPSGIMDAIFIHLFQW 790 Query: 799 AKEQGYAYFNLGMAPLSSVGQTQSAIREEKLAHLVFKHGGHWYGFLGLRKYKEKFSPVWE 858 AKE Y FN+GMAPLS+VG + + E++A +F + + Y F GLR +KEK+ P W Sbjct: 791 AKENEYHSFNIGMAPLSNVGLSTQSFWSERVAAAIFNNVRYTYSFSGLRHFKEKYKPAWS 850 Query: 859 PRYLAYPSQVSXXXXXXXXXXXIARRPN 886 +YLA+ S I +R N Sbjct: 851 GKYLAFRKNHSLPITMLSVTKLIGKRKN 878 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.325 0.140 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 5,061,630,005 Number of extensions: 206771015 Number of successful extensions: 618461 Number of sequences better than 1.0e-05: 512 Number of HSP's gapped: 616686 Number of HSP's successfully gapped: 604 Length of query: 888 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 743 Effective length of database: 1,694,649,028 Effective search space: 1259124227804 Effective search space used: 1259124227804 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 136 (57.0 bits)