BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0021.p (589 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DMD6.1 B1DMD6_9BACL ABC transporter transmembrane region 828 0.0 Q67RS6.1 Q67RS6_SYMTH ABC transporter ATP-binding protein 602 e-170 Q2B5C4.1 Q2B5C4_9BACI ABC transporter ATP-binding protein 582 e-164 A6CLY9.1 A6CLY9_9BACI ABC transporter ATP-binding protein 577 e-162 Q8ERA1.1 Q8ERA1_OCEIH ABC transporter ATP-binding protein 568 e-160 >B1DMD6.1 B1DMD6_9BACL ABC transporter transmembrane region Length = 594 Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/575 (69%), Positives = 473/575 (82%) Query: 1 MDVLRQLRGFYREKLHYLILSIFCLAAATAVGLITPNLLRRLIDEVIVPLKFTEXXXXXX 60 MDV RQL+ FY + YL+ SI CL ATA+GL+ PNLLR LID VI P F + Sbjct: 1 MDVFRQLKRFYWVERRYLLSSIICLMFATALGLVYPNLLRYLIDNVIKPKDFDKVPMLAL 60 Query: 61 XXXXXXXXXXCLQFAHGFFGGRLGNFLAYRLRNACYEKLQFLSFRYYDTAKTGDLMSRLT 120 +QF HGFFGGRLGN + +R+RNACY+KLQ LSF+YYD AKTGDLMSRLT Sbjct: 61 TVVGVVTLKGFMQFLHGFFGGRLGNRVVFRMRNACYDKLQTLSFQYYDKAKTGDLMSRLT 120 Query: 121 GDLEAIRLFIGFGFAQLLNVFFMVLFGSIMMFAINWQLTLITLITMPFLAAVAFRFESKI 180 DLEAIR FIGFGFAQ+LNV M+LFG MM +I+W+LTLITL+T+PFLA A RFE +I Sbjct: 121 ADLEAIRQFIGFGFAQILNVALMILFGGAMMMSIDWRLTLITLVTIPFLAFTAIRFEKRI 180 Query: 181 HPAFQEMRLALSSLTTAVQENVTGVRTVKSFAREAYEVEKFSHRNERYKDNQIFAAELWS 240 HPAF+EMR A+S+LTTAVQEN+TGVRTVKSFARE +EV+KFS RNE+YK NQI A+ +W+ Sbjct: 181 HPAFREMRKAMSNLTTAVQENITGVRTVKSFAREPHEVDKFSKRNEQYKANQIGASSIWA 240 Query: 241 KFFPVMELLASVSVAILLGVGGTLVIKGHMSLGELVAFFSLIWYIIGPVWGLGFHINNYT 300 KFFP MELLA+VSV ILL GGT+VI+G ++LGELVAFFSLIWYIIGP+WG+GFHINNYT Sbjct: 241 KFFPSMELLANVSVVILLVAGGTMVIRGSLTLGELVAFFSLIWYIIGPMWGIGFHINNYT 300 Query: 301 QSKASGERVLEVLNQHIDVKDKENARELVAAEVKGEVVFDHVTFAYGNKMPAVKDIHFSA 360 QSKASGER++E+LN H+ V+ ENA E+ V+G V F++VTF Y +K PAV +I+ A Sbjct: 301 QSKASGERIMELLNTHVHVQSIENAVEVDKEVVRGHVRFENVTFNYPDKTPAVTNINIDA 360 Query: 361 PPGAVIGFLGGTGSGKSTIIQLMMRAYDVNKGSIRLDGVDIREYNVRSLRSQIATVFQET 420 PPG V+G LG TGSGKSTIIQLMMRAY+V G + LDG+DI+ +V++LRSQIA VFQET Sbjct: 361 PPGKVVGLLGATGSGKSTIIQLMMRAYNVKTGRVTLDGIDIQNLDVQTLRSQIAPVFQET 420 Query: 421 FLFSSSIRNNISYGLKNVGMEEIIRAAKLAKAHDFIMEMPEGYDTVVGERGMGLSGGQKQ 480 FLFS+SIR NI+YG KNV E+IIRAAKLAKAHDFIME+P GYDT+VGERGMGLSGGQKQ Sbjct: 421 FLFSASIRTNIAYGEKNVTDEQIIRAAKLAKAHDFIMELPLGYDTIVGERGMGLSGGQKQ 480 Query: 481 RIAIARALLKNPRILILDDATSAVDMETEHEIQAGFQEVMRGRTTLIIAHRISSLRHADQ 540 RIAIARAL++NPRILILDDATSAVDMETEHEIQAGF+E+M GRTT IIAHRISSLRHAD+ Sbjct: 481 RIAIARALIRNPRILILDDATSAVDMETEHEIQAGFKELMAGRTTFIIAHRISSLRHADE 540 Query: 541 IIVMNEGNMVQQGTHQELIEVPGPYQDVYRIQYAD 575 IIV++ G++VQ+GTH ELI GPY++ Y IQYAD Sbjct: 541 IIVLDNGHIVQRGTHNELIAEHGPYRETYNIQYAD 575 >Q67RS6.1 Q67RS6_SYMTH ABC transporter ATP-binding protein Length = 597 Score = 602 bits (1552), Expect = e-170, Method: Compositional matrix adjust. Identities = 299/585 (51%), Positives = 408/585 (69%), Gaps = 11/585 (1%) Query: 1 MDVLRQLRGFYREKLHYLILSIFCLAAATAVGLITPNLLRRLIDEVIVPLKFTEXXXXXX 60 M V +LR F+ + + + S+ +A TAVGL+ P LL +LID VI +F E Sbjct: 1 MRVFARLRRFFVPYIGWGLGSVLAMACLTAVGLVRPWLLEQLIDRVIREQRFAELPYWTA 60 Query: 61 XXXXXXXXXXCLQFAHGFFGGRLGNFLAYRLRNACYEKLQFLSFRYYDTAKTGDLMSRLT 120 F + G G LRNA Y+KLQ+L F+YYD A TGDLMSR+T Sbjct: 61 AVLAVALVRAVFNFLRQYLGHSFGQNATLDLRNALYDKLQYLHFKYYDNAYTGDLMSRVT 120 Query: 121 GDLEAIRLFIGFGFAQLLNVFFMVLFGSIMMFAINWQLTLITLITMPFLAAVAFRFESKI 180 D+EA R+F+ FG+ L+++ FM LF ++M +++ +LTL+TL+ MPFL AV RFE ++ Sbjct: 121 ADVEAFRMFLSFGWVHLMDILFMTLFSLVVMLSMSVRLTLVTLLAMPFLLAVVLRFERRV 180 Query: 181 HPAFQEMRLALSSLTTAVQENVTGVRTVKSFAREAYEVEKFSHRNERYKDNQIFAAELWS 240 HPAF+ +R AL+ L+TA QEN+ G+RTVKSFARE +EV KF+ N+ Y + + LW+ Sbjct: 181 HPAFRRVREALAGLSTAAQENLNGMRTVKSFAREDFEVRKFAAHNQEYLEANLATTGLWA 240 Query: 241 KFFPVMELLASVSVAILLGVGGTLVIKGHMSLGELVAFFSLIWYIIGPVWGLGFHINNYT 300 ++FPVMELL+++++ ++L GG LV++G +SLGELVAF SLIWY I P+ +G+ IN T Sbjct: 241 RYFPVMELLSNLALTLMLAYGGLLVLRGELSLGELVAFNSLIWYWIWPMREVGYRINELT 300 Query: 301 QSKASGERVLEVLNQHIDVKDKENARELVAAEVKGEVVFDHVTFAYGNKMP--------- 351 Q+ ASGER+LEVL + V+ L E+KG V F+ V F Y + P Sbjct: 301 QAIASGERLLEVLEHPVAVQSPPEPVRL--PEMKGHVRFEGVWFQYDSPRPGTGEISPHP 358 Query: 352 AVKDIHFSAPPGAVIGFLGGTGSGKSTIIQLMMRAYDVNKGSIRLDGVDIREYNVRSLRS 411 A+ DIH APPG+VIG +G TGSGKST++ L+ R YDV +G + +DG+D+R+ ++ LR Sbjct: 359 ALADIHLDAPPGSVIGLIGATGSGKSTLVALIPRFYDVTRGRVTIDGIDVRDLDLDDLRR 418 Query: 412 QIATVFQETFLFSSSIRNNISYGLKNVGMEEIIRAAKLAKAHDFIMEMPEGYDTVVGERG 471 QI V QETFL+S+SIR NI+YG + MEEII AAKLA+AHDFIME P GYDT++GERG Sbjct: 419 QIGIVQQETFLWSASIRENIAYGRRTATMEEIIAAAKLARAHDFIMETPAGYDTIIGERG 478 Query: 472 MGLSGGQKQRIAIARALLKNPRILILDDATSAVDMETEHEIQAGFQEVMRGRTTLIIAHR 531 +GLSGGQ+QRIAIARA+L NPRILILDDAT++VDMETEHEIQ Q MRGRTT IIAHR Sbjct: 479 LGLSGGQRQRIAIARAILNNPRILILDDATASVDMETEHEIQVALQNAMRGRTTFIIAHR 538 Query: 532 ISSLRHADQIIVMNEGNMVQQGTHQELIEVPGPYQDVYRIQYADY 576 +SS++HAD+I+V+++G +V++GTH+EL+ G Y+ +Y IQ+ D+ Sbjct: 539 LSSVKHADEILVLDQGRIVERGTHEELLARGGVYRAIYDIQFRDF 583 >Q2B5C4.1 Q2B5C4_9BACI ABC transporter ATP-binding protein Length = 586 Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust. Identities = 281/577 (48%), Positives = 397/577 (68%), Gaps = 3/577 (0%) Query: 1 MDVLRQLRGFYREKLHYLILSIFCLAAATAVGLITPNLLRRLIDEVIVPLKFTEXXXXXX 60 +++ ++L+ +Y Y I S+ L A T + ++ P +L+ IDEV++ K+ Sbjct: 3 LEIFKKLKEYYWPYKKYFIWSMVFLLAVTGITVVYPMILQLTIDEVVLGGKYEWIPYLAF 62 Query: 61 XXXXXXXXXXCLQFAHGFFGGRLGNFLAYRLRNACYEKLQFLSFRYYDTAKTGDLMSRLT 120 + H + G G Y+LRN+ YEKLQFL F+YYD AKTGD+MSRLT Sbjct: 63 GFIGIMFVKGIATYIHQYTGDLFGITSVYKLRNSLYEKLQFLPFKYYDNAKTGDIMSRLT 122 Query: 121 GDLEAIRLFIGFGFAQLLNVFFMVLFGSIMMFAINWQLTLITLITMPFLAAVAFRFESKI 180 D+E R F+ FGF++L+ ++ +MF + LTL+TL T+PFLA V F+F+ + Sbjct: 123 ADVEGFRFFLSFGFSELIRFILLIGISFSVMFYYSVPLTLVTLATLPFLAVVTFKFDKAV 182 Query: 181 HPAFQEMRLALSSLTTAVQENVTGVRTVKSFAREAYEVEKFSHRNERYKDNQIFAAELWS 240 HPAF+ +R + L T VQEN++G+ TVKS +RE +E+ KF+ NE YKDN +F +++W+ Sbjct: 183 HPAFRGIRKSFGKLNTKVQENISGINTVKSLSREDFEIGKFNRSNEDYKDNYLFTSDIWA 242 Query: 241 KFFPVMELLASVSVAILLGVGGTLVIKGHMSLGELVAFFSLIWYIIGPVWGLGFHINNYT 300 K+FP+ME L ++SV +LL GG LVI G + GELVAF+SL+WYI+ P+ LGF IN ++ Sbjct: 243 KYFPLMEFLGNLSVVLLLSYGGYLVIDGSLQPGELVAFYSLVWYIMWPIMNLGFVINLFS 302 Query: 301 QSKASGERVLEVLNQHIDVKDKENARELVAAEVKGEVVFDHVTFAYGNK-MPAVKDIHFS 359 Q+KASGER+LE+L ++K+ ++A E + GEV F V+ Y + A+ D+ F Sbjct: 303 QAKASGERLLEILEAENEIKETDHAAE--PDRIHGEVDFKSVSLQYTKEDKEALHDVSFK 360 Query: 360 APPGAVIGFLGGTGSGKSTIIQLMMRAYDVNKGSIRLDGVDIREYNVRSLRSQIATVFQE 419 A PG IG +G TGSGK+++ QLM R Y+ + G + +DG ++R+Y++ +LRS I V QE Sbjct: 361 AHPGKTIGLIGATGSGKTSVTQLMTRFYEASSGEVLIDGRNVRDYSLEALRSGIGFVLQE 420 Query: 420 TFLFSSSIRNNISYGLKNVGMEEIIRAAKLAKAHDFIMEMPEGYDTVVGERGMGLSGGQK 479 +FLFSSSI+ NISYG +EEI+ AAK A+AH+FIME+PEGYDT++GERGMGLSGGQK Sbjct: 421 SFLFSSSIKANISYGRPEASIEEIMDAAKRAQAHEFIMELPEGYDTMLGERGMGLSGGQK 480 Query: 480 QRIAIARALLKNPRILILDDATSAVDMETEHEIQAGFQEVMRGRTTLIIAHRISSLRHAD 539 QRIAIARA+ +P ILILDDATSAVDM TE IQ +EVM+GRTT IIAHRISSL+HAD Sbjct: 481 QRIAIARAICTDPGILILDDATSAVDMTTEFNIQQALKEVMKGRTTFIIAHRISSLKHAD 540 Query: 540 QIIVMNEGNMVQQGTHQELIEVPGPYQDVYRIQYADY 576 +I+V +G + ++G H++L++ GPYQ +Y IQY D+ Sbjct: 541 EILVFKDGRIAERGRHEDLLKNNGPYQRIYDIQYKDH 577 >A6CLY9.1 A6CLY9_9BACI ABC transporter ATP-binding protein Length = 584 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 287/576 (49%), Positives = 388/576 (67%), Gaps = 3/576 (0%) Query: 1 MDVLRQLRGFYREKLHYLILSIFCLAAATAVGLITPNLLRRLIDEVIVPLKFTEXXXXXX 60 M+ ++L+ FY + SI L A T + ++ P +L+ IDEVI+ KF Sbjct: 1 METFKKLKQFYWPYKKFFFTSIIFLIAVTLITVVYPIILQLTIDEVILKSKFGWVPYLAF 60 Query: 61 XXXXXXXXXXCLQFAHGFFGGRLGNFLAYRLRNACYEKLQFLSFRYYDTAKTGDLMSRLT 120 + H + G G YRLRN YEKLQ+L FRYYD AKTGDLMSRLT Sbjct: 61 GFIFIMALKGVATYIHQYNGDMFGITSVYRLRNELYEKLQYLPFRYYDNAKTGDLMSRLT 120 Query: 121 GDLEAIRLFIGFGFAQLLNVFFMVLFGSIMMFAINWQLTLITLITMPFLAAVAFRFESKI 180 D+EA R F+ FG ++L+ +V +MF + LT +TL T+PFLA ++F+ + Sbjct: 121 ADVEAFRFFLSFGISELIRFVLLVTVSFGVMFYYSPSLTFVTLATLPFLAVAVYKFDKAV 180 Query: 181 HPAFQEMRLALSSLTTAVQENVTGVRTVKSFAREAYEVEKFSHRNERYKDNQIFAAELWS 240 HPAF+ +R + L T VQEN++G+ TVKS +RE Y+++KF+ N YK+ + +++W+ Sbjct: 181 HPAFRGIRKSFGKLNTNVQENISGINTVKSLSREEYQIDKFNSSNGDYKEKYLLTSDVWA 240 Query: 241 KFFPVMELLASVSVAILLGVGGTLVIKGHMSLGELVAFFSLIWYIIGPVWGLGFHINNYT 300 K+FP+MELL +VSV +LL GG LV+ + GELVAF+SL+WYII P+ LGF IN ++ Sbjct: 241 KYFPLMELLGNVSVVLLLSYGGFLVMDNSLEPGELVAFYSLLWYIIWPIMNLGFTINQFS 300 Query: 301 QSKASGERVLEVLNQHIDVKDKENARELVAAEVKGEVVFDHVTFAY-GNKMPAVKDIHFS 359 QSKASGER+LE+L D++DKENA + A +KGEV F +V+ Y + A++ I F Sbjct: 301 QSKASGERLLEILEADEDIQDKENA--IKADRLKGEVEFKNVSLRYTKDDEEALEGISFK 358 Query: 360 APPGAVIGFLGGTGSGKSTIIQLMMRAYDVNKGSIRLDGVDIREYNVRSLRSQIATVFQE 419 A PG VIG +GGTGSGK++I L+ R Y+ +G + +DG + +Y ++SLR I V QE Sbjct: 359 AQPGKVIGLIGGTGSGKTSITSLLTRFYEPTEGEVLVDGKPVEDYAIKSLRKNIGFVLQE 418 Query: 420 TFLFSSSIRNNISYGLKNVGMEEIIRAAKLAKAHDFIMEMPEGYDTVVGERGMGLSGGQK 479 +FLFSS+I+ NISYG M+EII AAK A+AHDFI E+ +GY+T +GERG+GLSGGQK Sbjct: 419 SFLFSSTIKTNISYGRPEATMDEIIDAAKRAQAHDFIEELEDGYETKLGERGLGLSGGQK 478 Query: 480 QRIAIARALLKNPRILILDDATSAVDMETEHEIQAGFQEVMRGRTTLIIAHRISSLRHAD 539 QRIAIARA+ +P ILILDDATSAVDMETE +IQ GF+EVM RTT IIAHRISSL+HAD Sbjct: 479 QRIAIARAICTDPSILILDDATSAVDMETEFKIQKGFKEVMADRTTFIIAHRISSLKHAD 538 Query: 540 QIIVMNEGNMVQQGTHQELIEVPGPYQDVYRIQYAD 575 +I+V+ G +V++G H LI GPYQ +Y IQY D Sbjct: 539 EILVLENGKIVERGVHDFLITNNGPYQRIYDIQYKD 574 >Q8ERA1.1 Q8ERA1_OCEIH ABC transporter ATP-binding protein Length = 582 Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust. Identities = 277/576 (48%), Positives = 397/576 (68%), Gaps = 4/576 (0%) Query: 1 MDVLRQLRGFYREKLHYLILSIFCLAAATAVGLITPNLLRRLIDEVIVPLKFTEXXXXXX 60 M+ ++L+ FY Y I SI + T++ ++ P +L+ ID+V+V ++ Sbjct: 1 METFKKLKRFYWPYKKYFIWSILFMLVVTSITVVYPIMLQITIDDVVVQSRYELIPWICG 60 Query: 61 XXXXXXXXXXCLQFAHGFFGGRLGNFLAYRLRNACYEKLQFLSFRYYDTAKTGDLMSRLT 120 F+ + G G Y+LR + Y+KLQ L+F+YYD AKTGD+MSRLT Sbjct: 61 LFLGLMVIKGFSTFSFQYLGDLFGMTSVYKLRESLYDKLQTLAFKYYDNAKTGDIMSRLT 120 Query: 121 GDLEAIRLFIGFGFAQLLNVFFMVLFGSIMMFAINWQLTLITLITMPFLAAVAFRFESKI 180 D+E R F+ GFA+LL + ++L +MF + L L+T+ MPFLA V F+F+ ++ Sbjct: 121 ADVEGFRFFLSVGFAELLRIISLILISLSIMFYYSVPLALVTMAAMPFLAIVVFQFDKRV 180 Query: 181 HPAFQEMRLALSSLTTAVQENVTGVRTVKSFAREAYEVEKFSHRNERYKDNQIFAAELWS 240 HPAF+ +R + L T VQEN++G+ TVKS +RE +E+ +FS+ N+ Y+ +F ++LW+ Sbjct: 181 HPAFRNVRKSFGQLNTRVQENISGMNTVKSLSREDFEIGRFSNSNDNYRQKYLFTSKLWA 240 Query: 241 KFFPVMELLASVSVAILLGVGGTLVIKGHMSLGELVAFFSLIWYIIGPVWGLGFHINNYT 300 +FFP+ME + +VS +LL GG LVI M+ GELVAFFSL+WYI+GP+ LGF IN ++ Sbjct: 241 RFFPMMEFIGNVSAVVLLAYGGYLVINETMNPGELVAFFSLVWYIMGPLMNLGFIINQFS 300 Query: 301 QSKASGERVLEVLNQHIDVKDKENARELVAAEVKGEVVFDHVTFAY-GNKMPAVKDIHFS 359 Q+KASGER+LE+L D+ +KE+A + +KG V F+ VT Y + A+K+I F Sbjct: 301 QAKASGERLLEILEAKEDIVEKESA---IETTIKGHVEFNDVTLTYIKDDDEALKNISFD 357 Query: 360 APPGAVIGFLGGTGSGKSTIIQLMMRAYDVNKGSIRLDGVDIREYNVRSLRSQIATVFQE 419 APPG IG +G TGSGK++I QL+ R Y+ +G + LDG + +Y +++LRSQI V QE Sbjct: 358 APPGKTIGLIGATGSGKTSITQLITRFYEPEQGEVLLDGRPVSDYKLKTLRSQIGFVLQE 417 Query: 420 TFLFSSSIRNNISYGLKNVGMEEIIRAAKLAKAHDFIMEMPEGYDTVVGERGMGLSGGQK 479 FLFS++IR NISYG V ++I++AAK+A+AHDFIME+P GYDT++GERGMGLSGGQK Sbjct: 418 PFLFSTTIRENISYGNPEVTEDQIVQAAKMAQAHDFIMELPNGYDTLLGERGMGLSGGQK 477 Query: 480 QRIAIARALLKNPRILILDDATSAVDMETEHEIQAGFQEVMRGRTTLIIAHRISSLRHAD 539 QRIAIARA+ +P ILILDDATSAVDM+TE +IQ +EVM+ RT+ IIAHRISSL+HAD Sbjct: 478 QRIAIARAICIDPSILILDDATSAVDMQTEFKIQKALREVMKNRTSFIIAHRISSLKHAD 537 Query: 540 QIIVMNEGNMVQQGTHQELIEVPGPYQDVYRIQYAD 575 +I+V+ +G +V++GTH +L+ GPY+ ++ IQY D Sbjct: 538 EILVLEDGEIVERGTHDDLVNNNGPYERIFNIQYQD 573 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.325 0.140 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,252,075,498 Number of extensions: 129658389 Number of successful extensions: 797993 Number of sequences better than 1.0e-05: 85587 Number of HSP's gapped: 689512 Number of HSP's successfully gapped: 92523 Length of query: 589 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 447 Effective length of database: 1,722,912,073 Effective search space: 770141696631 Effective search space used: 770141696631 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 134 (56.2 bits)