BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0020.p (619 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K700.1 B3K700_9BACI ABC transporter related 1005 0.0 B1DMD5.1 B1DMD5_9BACL ABC transporter related 898 0.0 Q2B5C3.1 Q2B5C3_9BACI YknV 733 0.0 Q65K70.1 Q65K70_BACLD YknV 708 0.0 Q67RS5.1 Q67RS5_SYMTH ABC transporter ATP-binding protein 706 0.0 >B3K700.1 B3K700_9BACI ABC transporter related Length = 621 Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/608 (77%), Positives = 544/608 (89%) Query: 12 KIKQSTAQEQSLEERFVYKDDDVIDKAFDWKQFTRLFSYMKPYARQMLPLVLVMMILGTV 71 KI + + ERFVYKDDD I+K F+W Q TRL SYMKPYA+Q+LPL+ +MMI+GT+ Sbjct: 14 KIPRPRKPSEETNERFVYKDDDAIEKPFNWTQLTRLISYMKPYAKQILPLIGLMMIIGTI 73 Query: 72 TKLTVPYLTSMAIDKAIAPKSGNPSLTLLYTLTAIVIVLYLIQWIAGVYRIKYTNVIGQR 131 TKL +P+LTS+AID+AI PK GNPSLTLLY +T V+ +Y+IQW+AG++RIK+TN+IGQR Sbjct: 74 TKLAIPFLTSLAIDQAIDPKEGNPSLTLLYQITIAVLAMYIIQWVAGIFRIKFTNIIGQR 133 Query: 132 VIYDLRSDLFRHIQKLSFNFFDKRPAGSVLVRVTNDINSLQDLFTNGVVNLMIDCVQLLG 191 VIYDLR+DLF+HIQ+LSFNFFDKRPAGSVLVRVTND+NSLQDLFTNGVVNL+IDCVQL+G Sbjct: 134 VIYDLRADLFQHIQRLSFNFFDKRPAGSVLVRVTNDVNSLQDLFTNGVVNLIIDCVQLVG 193 Query: 192 IMVILLLINWKLGLAVMITVPIMFFVSTKLRQKIRIAWQDVRMKNSRINSHLNESIQGIR 251 I+VILLLINWKLGLAV++TVPIMFF+STKLR +IR AWQ+VR++NSRINSHLNESIQGIR Sbjct: 194 IVVILLLINWKLGLAVIVTVPIMFFISTKLRVRIRRAWQEVRIRNSRINSHLNESIQGIR 253 Query: 252 VTQAYTQEKENMNYFDAMNMDSRKSWNKASAMNQAFGPIIEITGGFGTMILFWFGAYLIQ 311 VTQAYTQE+ENM +FD MN+DS+KSW++ASAMNQ FGP+IEITGGFG++ILFW GA LIQ Sbjct: 254 VTQAYTQEEENMKFFDNMNLDSKKSWDRASAMNQGFGPLIEITGGFGSLILFWLGAVLIQ 313 Query: 312 TGELTVGFLVAFSSYVSNFWDPINRLGQMYNQLLVAMASSERIFEYLDEQPSVQDNPGAT 371 GELT+G L+AF+ YV NFW+PINRLGQMYNQLLVAMASSERIFE++DE+PS+ D PGA Sbjct: 314 QGELTIGLLIAFTQYVGNFWEPINRLGQMYNQLLVAMASSERIFEFIDEKPSIDDQPGAK 373 Query: 372 PLPKIKGDIKFNKVVFEYEKGRAALKGIDLDVKAGQSIALVGHTGSGKSTIINLIGRFYD 431 LP IKGDIK VVFEYEKGR ALKGI+LDVKAGQSIALVGHTGSGKSTIINL+ RFYD Sbjct: 374 KLPTIKGDIKLENVVFEYEKGRQALKGINLDVKAGQSIALVGHTGSGKSTIINLLSRFYD 433 Query: 432 IKSGSITIDGQDTREVTLQSLREQIGIVLQDTFIFSGTIRDNIRFGRLDATDQEVEEAAK 491 I G +TIDG D + VT++SLR QIGIVLQDTFIFSGTIRDNIRFGRLDAT++E+E+ AK Sbjct: 434 ITDGKLTIDGYDIQTVTVESLRNQIGIVLQDTFIFSGTIRDNIRFGRLDATNEEIEDVAK 493 Query: 492 AVDAHEFISKLPGGYDTEVEERGSALSMGQRQLLSFARALLANPRILILDEATASIDTET 551 AV AHEFI ++PGGYDTEVEERG+ LSMGQRQLLSFARALLA+PRILILDEATASIDTET Sbjct: 494 AVGAHEFIVQMPGGYDTEVEERGNMLSMGQRQLLSFARALLADPRILILDEATASIDTET 553 Query: 552 EIKIQEALKILLQGRTSFIVAHRLSTIRHADKIVVLDHGEIKEEGTHAELTAHDGIYNGL 611 E+KIQ ALK+LLQGRTSFIVAHRLSTIRHAD IVVLDHG+I EEG H +L G Y+GL Sbjct: 554 ELKIQSALKVLLQGRTSFIVAHRLSTIRHADHIVVLDHGKIIEEGNHDQLMQKQGTYHGL 613 Query: 612 IEAQFRFL 619 IEAQ+RFL Sbjct: 614 IEAQYRFL 621 >B1DMD5.1 B1DMD5_9BACL ABC transporter related Length = 615 Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/596 (70%), Positives = 509/596 (85%), Gaps = 1/596 (0%) Query: 24 EERFVYKDDDVIDKAFDWKQFTRLFSYMKPYARQMLPLVLVMMILGTVTKLTVPYLTSMA 83 +ERF+Y+DDD I+K F+W Q RLF YMKPY RQ++P V+V MI+GT+T+LT+P LT +A Sbjct: 19 KERFIYQDDDAIEKPFNWSQMRRLFIYMKPYTRQLIP-VIVAMIIGTITRLTIPALTIVA 77 Query: 84 IDKAIAPKSGNPSLTLLYTLTAIVIVLYLIQWIAGVYRIKYTNVIGQRVIYDLRSDLFRH 143 ID+AI P++G+ S LY + I++ L++IQW + YRIKYTN+IGQ+VIYDLR LF+H Sbjct: 78 IDQAIQPENGDTSYGKLYLVAGIMVALFIIQWASNQYRIKYTNIIGQKVIYDLRHHLFQH 137 Query: 144 IQKLSFNFFDKRPAGSVLVRVTNDINSLQDLFTNGVVNLMIDCVQLLGIMVILLLINWKL 203 IQKLSF F+DKRPAGSVLVRVTND+N+LQDLFTNGVVN ++DCVQL GI++ILL+ N+KL Sbjct: 138 IQKLSFRFYDKRPAGSVLVRVTNDVNALQDLFTNGVVNSLMDCVQLAGIVIILLIWNFKL 197 Query: 204 GLAVMITVPIMFFVSTKLRQKIRIAWQDVRMKNSRINSHLNESIQGIRVTQAYTQEKENM 263 GLAVMITVPIMF VS+ LR++IR AWQDVR K SRINSHLNESIQG+++TQAY QEKENM Sbjct: 198 GLAVMITVPIMFLVSSTLRKRIRFAWQDVRKKQSRINSHLNESIQGMKITQAYVQEKENM 257 Query: 264 NYFDAMNMDSRKSWNKASAMNQAFGPIIEITGGFGTMILFWFGAYLIQTGELTVGFLVAF 323 +F+ MN + K+WNKASA+NQ FGP+IE+T GT ILFW+G+YLI+ E+TVG LV F Sbjct: 258 RFFENMNAVNVKAWNKASALNQTFGPVIEVTSAIGTFILFWYGSYLIEHQEITVGLLVGF 317 Query: 324 SSYVSNFWDPINRLGQMYNQLLVAMASSERIFEYLDEQPSVQDNPGATPLPKIKGDIKFN 383 ++YV NFWDPINRLGQ+YNQLLVAMASSERIFE++DE+P+V + A PL I+GD+ F+ Sbjct: 318 ANYVGNFWDPINRLGQVYNQLLVAMASSERIFEFIDEEPTVGELEYAKPLASIRGDVHFD 377 Query: 384 KVVFEYEKGRAALKGIDLDVKAGQSIALVGHTGSGKSTIINLIGRFYDIKSGSITIDGQD 443 +VFEYEKGR AL GI ++VKAGQSIALVGHTGSGKSTIINL+ RFYD SG + IDGQD Sbjct: 378 NIVFEYEKGRPALHGISINVKAGQSIALVGHTGSGKSTIINLLCRFYDPVSGVVRIDGQD 437 Query: 444 TREVTLQSLREQIGIVLQDTFIFSGTIRDNIRFGRLDATDQEVEEAAKAVDAHEFISKLP 503 R +TL SLR Q+G+V+QDTFIFSGTIRDNIR+G LDATD E+ EAAKAV+AH+FI LP Sbjct: 438 IRNITLDSLRSQVGLVMQDTFIFSGTIRDNIRYGCLDATDNEIVEAAKAVNAHDFIMSLP 497 Query: 504 GGYDTEVEERGSALSMGQRQLLSFARALLANPRILILDEATASIDTETEIKIQEALKILL 563 GYDTEVEERG+ LSMGQRQLLSFARALLA+PR+LILDEATASIDTETE+KIQEALK LL Sbjct: 498 DGYDTEVEERGNVLSMGQRQLLSFARALLADPRVLILDEATASIDTETELKIQEALKTLL 557 Query: 564 QGRTSFIVAHRLSTIRHADKIVVLDHGEIKEEGTHAELTAHDGIYNGLIEAQFRFL 619 +GRTSF++AHRLSTIR+AD+I+VLDHG I E+G H L +G+YNGLIEAQ+RFL Sbjct: 558 KGRTSFMIAHRLSTIRNADEIIVLDHGRIVEQGNHDALIKKNGVYNGLIEAQYRFL 613 >Q2B5C3.1 Q2B5C3_9BACI YknV Length = 605 Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/606 (58%), Positives = 462/606 (76%), Gaps = 6/606 (0%) Query: 15 QSTAQEQSLEERFVYKDDDVIDKAFDWKQFTRLFSYMKPYARQMLPLVLVMMILGTVTKL 74 + TA+E L+ RF Y DDVI+K F+WKQ RLFSYMKPY +++LPL ++M+++ T +L Sbjct: 2 KETAKETVLK-RFHYSTDDVIEKPFNWKQMFRLFSYMKPYRKKLLPLSILMVLITTAVRL 60 Query: 75 TVPYLTSM-AIDKAIAPKSGNPSLTLLYTLTAIVIVLYLIQWIAGVYRIKYTNVIGQRVI 133 +P + + +DKA+ K LL TL I+ LY +IA ++RIK+ N +GQ VI Sbjct: 61 IIPIMIGVYTLDKALKDKDTG----LLTTLVIIIAALYTSSYIANIFRIKWMNALGQNVI 116 Query: 134 YDLRSDLFRHIQKLSFNFFDKRPAGSVLVRVTNDINSLQDLFTNGVVNLMIDCVQLLGIM 193 YDLR LF H+Q LS FFD+R AGS+LVR+ NDINSLQ+LFTNGV+NL++D + L GI Sbjct: 117 YDLRKHLFAHVQTLSHRFFDQRSAGSILVRIMNDINSLQELFTNGVINLLMDLILLCGIF 176 Query: 194 VILLLINWKLGLAVMITVPIMFFVSTKLRQKIRIAWQDVRMKNSRINSHLNESIQGIRVT 253 VIL ++ +L LA+M+ +PIMFF+ST LR+ IR +WQ VR+K S++NSHLNES+QGIRVT Sbjct: 177 VILFTLSPQLTLAIMVILPIMFFISTSLRRNIRRSWQTVRLKQSKLNSHLNESLQGIRVT 236 Query: 254 QAYTQEKENMNYFDAMNMDSRKSWNKASAMNQAFGPIIEITGGFGTMILFWFGAYLIQTG 313 QA+TQEKENM +FD +N ++ +SW +AS N F P++E+T FGT L W+GA+LIQ G Sbjct: 237 QAFTQEKENMMFFDGVNNENFESWRQASQKNAMFRPLVELTNAFGTAALIWYGAHLIQNG 296 Query: 314 ELTVGFLVAFSSYVSNFWDPINRLGQMYNQLLVAMASSERIFEYLDEQPSVQDNPGATPL 373 +T+G V+F+ Y+ FW+PI+RLG +YNQLL+ MASSERIFE+LDE+P V ++ A L Sbjct: 297 SITIGVFVSFAFYLGMFWEPISRLGMVYNQLLMGMASSERIFEFLDEKPIVSESENAIVL 356 Query: 374 PKIKGDIKFNKVVFEYEKGRAALKGIDLDVKAGQSIALVGHTGSGKSTIINLIGRFYDIK 433 +KG I+F F Y+ R AL I+L++KAGQ+ ALVGHTGSGK+TI NLI RFYD Sbjct: 357 DDMKGQIQFKDAEFSYDSKRTALNRINLEIKAGQTAALVGHTGSGKTTIANLISRFYDPT 416 Query: 434 SGSITIDGQDTREVTLQSLREQIGIVLQDTFIFSGTIRDNIRFGRLDATDQEVEEAAKAV 493 G++ IDG + R+V+L+SLR +I +VLQDTFIFSGTI +NIRFGR DA+++EV AA+AV Sbjct: 417 EGAVLIDGHNLRDVSLKSLRAKISVVLQDTFIFSGTIAENIRFGRPDASEEEVIRAAEAV 476 Query: 494 DAHEFISKLPGGYDTEVEERGSALSMGQRQLLSFARALLANPRILILDEATASIDTETEI 553 A +FI LP GY+TEVEERG+ LS+G+RQLLSFARALLA+PRILILDEATASIDTETE+ Sbjct: 477 GAADFIRNLPKGYETEVEERGNILSVGERQLLSFARALLADPRILILDEATASIDTETEM 536 Query: 554 KIQEALKILLQGRTSFIVAHRLSTIRHADKIVVLDHGEIKEEGTHAELTAHDGIYNGLIE 613 +IQEALK LL+GRT+ I+AHRLSTIR ADKI VLDHG I EEG+H EL G Y L++ Sbjct: 537 RIQEALKTLLKGRTAIIIAHRLSTIRDADKIFVLDHGSILEEGSHEELMNKKGQYFQLVK 596 Query: 614 AQFRFL 619 AQF L Sbjct: 597 AQFTML 602 >Q65K70.1 Q65K70_BACLD YknV Length = 606 Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/604 (56%), Positives = 453/604 (75%), Gaps = 5/604 (0%) Query: 15 QSTAQEQSLEERFVYKDDDVIDKAFDWKQFTRLFSYMKPYARQMLPLVLVMMILGTVTKL 74 ++ A++Q+L RF Y D +I+K F+W Q RL Y+KPY + +LPL + +++ +L Sbjct: 2 ENQAKKQTLMNRFFYTSDQIIEKPFNWAQMWRLLKYLKPYRKNLLPLSFLTVMISAAIRL 61 Query: 75 TVPYLTSM-AIDKAIAPKSGNPSLTLLYTLTAIVIVLYLIQWIAGVYRIKYTNVIGQRVI 133 VP L + A+D+AIA + N LL L +++ LYL+ +++ V RI++ N +GQ VI Sbjct: 62 AVPILIGVYALDQAIAGRDMN----LLVILISVISGLYLVNYVSNVLRIRWMNKLGQHVI 117 Query: 134 YDLRSDLFRHIQKLSFNFFDKRPAGSVLVRVTNDINSLQDLFTNGVVNLMIDCVQLLGIM 193 YDLR LF H+Q+LS FFD+R AGS+LVR+ NDINSLQ+LFT+GV+NL++D + L GI+ Sbjct: 118 YDLRQHLFTHVQRLSHRFFDERSAGSILVRIMNDINSLQELFTSGVINLLMDILLLFGIV 177 Query: 194 VILLLINWKLGLAVMITVPIMFFVSTKLRQKIRIAWQDVRMKNSRINSHLNESIQGIRVT 253 VIL ++ +L +A+M+T+P+MFF+ST LR+KIR +WQ VR+K S++NSHLNESIQGIRVT Sbjct: 178 VILFSLSPELTIAIMVTLPVMFFISTNLRRKIRRSWQKVRLKQSKLNSHLNESIQGIRVT 237 Query: 254 QAYTQEKENMNYFDAMNMDSRKSWNKASAMNQAFGPIIEITGGFGTMILFWFGAYLIQTG 313 QA+TQEKENM YF+ +N ++ ++W +A+ N F P++E+T GT IL W+G+ LI Sbjct: 238 QAFTQEKENMMYFEGVNSENFEAWREATKKNATFRPLVEMTNAVGTAILIWYGSSLIINE 297 Query: 314 ELTVGFLVAFSSYVSNFWDPINRLGQMYNQLLVAMASSERIFEYLDEQPSVQDNPGATPL 373 +T+G V+F+ Y+ FW+PI+RLGQ+YNQLL+ MASSERIFE+LDE+PSV D A + Sbjct: 298 TITIGVFVSFAFYLGMFWEPISRLGQVYNQLLMGMASSERIFEFLDEKPSVADKEDAVKI 357 Query: 374 PKIKGDIKFNKVVFEYEKGRAALKGIDLDVKAGQSIALVGHTGSGKSTIINLIGRFYDIK 433 ++KG I+F +V F Y+ R AL I ++ AG S+ALVGHTGSGK+TI NLI RFYD Sbjct: 358 KELKGRIEFEQVEFSYDGNRKALHSISFEIPAGSSLALVGHTGSGKTTIANLISRFYDAT 417 Query: 434 SGSITIDGQDTREVTLQSLREQIGIVLQDTFIFSGTIRDNIRFGRLDATDQEVEEAAKAV 493 G++ +DG +++L LR QI IVLQDTFIFSGTI +NIRFGR +A D+EV EAAKAV Sbjct: 418 GGAVKVDGIPITDISLSDLRSQISIVLQDTFIFSGTIMENIRFGRPNAADEEVIEAAKAV 477 Query: 494 DAHEFISKLPGGYDTEVEERGSALSMGQRQLLSFARALLANPRILILDEATASIDTETEI 553 A FIS LP GY TEVEERG+ LS G+RQL+SFARALLA+PRILILDEATASIDTETE+ Sbjct: 478 GADSFISALPNGYATEVEERGNVLSAGERQLISFARALLADPRILILDEATASIDTETEV 537 Query: 554 KIQEALKILLQGRTSFIVAHRLSTIRHADKIVVLDHGEIKEEGTHAELTAHDGIYNGLIE 613 KIQ ALK LL GRT+ ++AHRLSTIR ADKI+VLDHG EEG H EL G+Y L++ Sbjct: 538 KIQAALKTLLHGRTAIMIAHRLSTIRDADKILVLDHGRKIEEGNHQELIGKRGMYYELVK 597 Query: 614 AQFR 617 AQ++ Sbjct: 598 AQYQ 601 >Q67RS5.1 Q67RS5_SYMTH ABC transporter ATP-binding protein Length = 630 Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/625 (53%), Positives = 460/625 (73%), Gaps = 12/625 (1%) Query: 6 NQGNTAK-IKQSTAQEQSLEERFVYKDDDVIDKAFDWKQFTRLFSYMKPYARQMLPLVLV 64 Q TA+ +++ A +RF Y+++ V +K FDW Q RL +++ PY R ++ L + Sbjct: 4 GQYRTARELRRGAAPRSENADRFYYREEQVFEKPFDWNQLKRLGAFLVPYLRYVI-LAGI 62 Query: 65 MMILGTVTKLTVPYLTSMAIDKAIAPKSGNPSLT----------LLYTLTAIVIVLYLIQ 114 M+ TVT+L VP+L + AID A+ + T L+ L ++ +YL+ Sbjct: 63 AMLGVTVTRLAVPWLMAQAIDTALESEVRFTRWTQWLEPYARTDRLFILAGAMLAVYLVN 122 Query: 115 WIAGVYRIKYTNVIGQRVIYDLRSDLFRHIQKLSFNFFDKRPAGSVLVRVTNDINSLQDL 174 W+A +I+ T+ +GQR +YDLR+ +F H+Q LS FFD RPAGS+LVRVTND+NSLQDL Sbjct: 123 WLANYAQIRLTSWVGQRALYDLRTKIFAHVQSLSMRFFDTRPAGSILVRVTNDVNSLQDL 182 Query: 175 FTNGVVNLMIDCVQLLGIMVILLLINWKLGLAVMITVPIMFFVSTKLRQKIRIAWQDVRM 234 FTNG+++ + D + L+GI++I++ ++ KL + + +P+M + +LR ++R WQ VR+ Sbjct: 183 FTNGIISALQDVLTLVGIILIMMSMHLKLSVVIFAFLPLMMVTTVRLRTRVRHGWQRVRI 242 Query: 235 KNSRINSHLNESIQGIRVTQAYTQEKENMNYFDAMNMDSRKSWNKASAMNQAFGPIIEIT 294 + SR+ +HL E+IQG+RVTQA++Q++ N ++F MN++ RK+W +N F PI+EI Sbjct: 243 QRSRLTAHLAEAIQGVRVTQAFSQQEPNKDFFADMNVEVRKTWMDTIRLNAWFNPIVEIM 302 Query: 295 GGFGTMILFWFGAYLIQTGELTVGFLVAFSSYVSNFWDPINRLGQMYNQLLVAMASSERI 354 G GT +++W+G ++Q G +TVG LVAF +YV FW+PI RL Q+Y +LVAMASSERI Sbjct: 303 GALGTAVVYWYGTRILQGGGITVGVLVAFVTYVGQFWEPILRLTQLYGNVLVAMASSERI 362 Query: 355 FEYLDEQPSVQDNPGATPLPKIKGDIKFNKVVFEYEKGRAALKGIDLDVKAGQSIALVGH 414 FEYLD +P+V + P A PLP I+G+++ + V F YE+GR AL+G+ L V G+++ALVGH Sbjct: 363 FEYLDTKPTVPEKPDAQPLPPIRGEVELDNVTFAYEEGRTALRGVSLKVNPGETVALVGH 422 Query: 415 TGSGKSTIINLIGRFYDIKSGSITIDGQDTREVTLQSLREQIGIVLQDTFIFSGTIRDNI 474 TG+GK++IINL+ RFYD+ G++ IDG D R+VTL+SLR QI +VLQDTFIFSGTI DNI Sbjct: 423 TGAGKTSIINLLSRFYDVNEGAVRIDGVDVRDVTLESLRRQIAVVLQDTFIFSGTIMDNI 482 Query: 475 RFGRLDATDQEVEEAAKAVDAHEFISKLPGGYDTEVEERGSALSMGQRQLLSFARALLAN 534 R+GRLDATD+EV EAA+AV AH+FI +LP GY TEV ERGS LSMG+RQL+SFARALLA+ Sbjct: 483 RYGRLDATDEEVIEAAEAVRAHDFIMRLPHGYQTEVRERGSRLSMGERQLISFARALLAD 542 Query: 535 PRILILDEATASIDTETEIKIQEALKILLQGRTSFIVAHRLSTIRHADKIVVLDHGEIKE 594 PRIL+LDEATASIDT+TE+ IQEAL LLQGRTSF++AHRL+TIR+ADKIVVLDHG+I E Sbjct: 543 PRILVLDEATASIDTQTELLIQEALARLLQGRTSFVIAHRLATIRNADKIVVLDHGQIVE 602 Query: 595 EGTHAELTAHDGIYNGLIEAQFRFL 619 GTH L A G Y LI+AQF+F+ Sbjct: 603 MGTHESLMARRGAYYNLIQAQFKFI 627 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.137 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,399,370,547 Number of extensions: 139696036 Number of successful extensions: 742702 Number of sequences better than 1.0e-05: 84876 Number of HSP's gapped: 643419 Number of HSP's successfully gapped: 90888 Length of query: 619 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 477 Effective length of database: 1,722,912,073 Effective search space: 821829058821 Effective search space used: 821829058821 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 134 (56.2 bits)