BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0015.p (618 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q65D51.1 Q65D51_BACLD Putative uncharacterized protein 569 e-160 Q8Y904.1 Q8Y904_LISMO Lmo0738 protein 566 e-159 Q4EUA7.1 Q4EUA7_LISMO PTS system, glucose subfamily, IIA compone... 566 e-159 B4AMR6.1 B4AMR6_BACPU Pts system beta-glucoside-specific eiibca ... 555 e-156 A8F9J1.1 A8F9J1_BACP2 PTS family glucose/glucoside (Glc) porter ... 550 e-154 >Q65D51.1 Q65D51_BACLD Putative uncharacterized protein Length = 619 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 291/618 (47%), Positives = 394/618 (63%), Gaps = 11/618 (1%) Query: 1 MSSKDLSKQIITLVGGESNVNSVFHCATRLRFKLKDNGKADKAALEKTPGVITVVENSGQ 60 M+ + ++K+I+ VGGE NV S+ HCATRLRFKLKD KAD+ ALE T GV+TVVE+ GQ Sbjct: 1 MNVQSMAKEILARVGGEKNVVSLVHCATRLRFKLKDRSKADREALENTDGVVTVVESGGQ 60 Query: 61 FQVVIGNNVSQVFEQIMKETSLQDAEKNGKDDGSESTGVL-GKAVDIISSIFSPIXXXXX 119 FQVVIGNNV +V+++I + + L E + D + G L G+ VD++SSIF+P+ Sbjct: 61 FQVVIGNNVPEVYKEIGRISQL--LESSAADHSQKEKGSLAGRLVDVVSSIFTPLLGVMA 118 Query: 120 XXXXXXXXXXXXXXXKWVSATSGTYLILNAASDSVFYFLPVFLAVTAARKFKANQFVSVA 179 W+S TY IL AA+DS+FYFLP+ LAVTAA+KF AN F+++ Sbjct: 119 GAGILKGLLLICTNAGWLSPEETTYTILYAAADSLFYFLPLLLAVTAAKKFGANPFIALT 178 Query: 180 IAGALVYPAVIAAVGSTEALKFLGIPVVLVNYSSSVIPIILAVWVQSYVEKWFRSIIHES 239 IAGAL+YP ++ S +F GIPVVL+NY+S+VIPIILAV+V SY+E+ IHES Sbjct: 179 IAGALIYPTILELKNSGAHTEFFGIPVVLMNYTSTVIPIILAVFVMSYLERLCMRFIHES 238 Query: 240 VRNILVPMFALLIVIPLTFLAFGPVGSLISEGLASGYTWLYNLSPLVAGAIAGAFWQVFV 299 V+N + P+ L +++PLT + FGP+G G+A+ +++ SP++AGAI A WQ+ V Sbjct: 239 VKNFITPLLCLTVMVPLTLIVFGPLGVYTGNGIAAAILSVFDFSPILAGAIIAALWQILV 298 Query: 300 IFGVHWGFVPIMLSNITTLGYDTMLPILAAAVLSQAGAVFGVFLKSKNTQLKALSGSSTL 359 IFG+HWG VP++L+NI G D + P AAAV +Q GA FGV LK+KN +LKAL+GS+ + Sbjct: 299 IFGIHWGIVPVILNNIAVHGKDYIKPATAAAVFAQTGAAFGVMLKTKNKKLKALAGSAAV 358 Query: 360 AAVFGITEPTIYGVTLKLKKPFIYACISXXXXXXXXXXXXXXXXXFSLPGLLALPTYFGT 419 +FGITEP +YGVTL+LKKPF+ IS PGLL +P ++G Sbjct: 359 TGIFGITEPAVYGVTLRLKKPFVCGVISAAAGGAIIGYSGSVALASGAPGLLTIPIFYGP 418 Query: 420 GFAWXXXXXXXXXXXXXXXXXXXGFDDPETAVEEKTSQPVVKQEITQIGKELIVSPLTGA 479 GF GFDDP VE +PV K E I SPL G Sbjct: 419 GFLGFIIGISVSFVLSILLTYIVGFDDP---VEVTKEEPVEKS-----AGEPIYSPLQGE 470 Query: 480 LLPLESLPDEAFASGAMGKGIVIEPSSGLLTSPVKGTVTTVFPTGHAIGITSEGGAELLI 539 +LPL + D+ FASGA+G+GI + PS G++T+P G VTT FPTGHA GIT+E GAE+LI Sbjct: 471 VLPLTEVSDKVFASGALGEGIAVVPSKGVVTAPADGIVTTAFPTGHAYGITTESGAEILI 530 Query: 540 HVGVNTVKLKGKHFQKKVQEGDKVEQGQTLLEFDADAIRAAGFVTATPVIVTNSADYLDV 599 H+G++TV+L+GKHF K +G V++G L EFD DA++ GF TP+IVTNS Y DV Sbjct: 531 HIGMDTVRLEGKHFNPKAVQGQNVKRGDILAEFDLDALKEEGFDVKTPIIVTNSGQYTDV 590 Query: 600 LKNTGTEISNGELLLTLI 617 + ++ E ++TLI Sbjct: 591 IPTDQKKVKTEERIITLI 608 >Q8Y904.1 Q8Y904_LISMO Lmo0738 protein Length = 617 Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 296/617 (47%), Positives = 399/617 (64%), Gaps = 5/617 (0%) Query: 1 MSSKDLSKQIITLVGGESNVNSVFHCATRLRFKLKDNGKADKAALEKTPGVITVVENSGQ 60 M + L+K+I+ VGGE NV SV HCATRLRFKL + KADK +E GVI+VVEN+GQ Sbjct: 1 MDYQKLAKEILANVGGEENVRSVVHCATRLRFKLVNKEKADKKQIESISGVISVVENAGQ 60 Query: 61 FQVVIGNNVSQVFEQIMKETSLQDAEKNGKDDGSEST--GVLGKAVDIISSIFSPIXXXX 118 QV+IGN V V++ + T L D + G++ + L KA+D+IS IF+PI Sbjct: 61 LQVIIGNTVGDVYKALGSFTKLTDDGDSEIAKGTKDSDGNFLSKAIDVISGIFTPILGAL 120 Query: 119 XXXXXXXXXXXXXXXXKWVSATSGTYLILNAASDSVFYFLPVFLAVTAARKFKANQFVSV 178 W++ +SGTY IL AA+DSVFYFLP+ LA TAARKF AN V++ Sbjct: 121 AGGGMLKGLLMILTTFGWLTESSGTYQILYAAADSVFYFLPLILAYTAARKFGANPPVAI 180 Query: 179 AIAGALVYPAVIAAVGSTEALKFLGIPVVLVNYSSSVIPIILAVWVQSYVEKWFRSIIHE 238 A AGALVYP +I + FL IPVVL++YS SVIPIILAVW S +E++ S IHE Sbjct: 181 AAAGALVYPTMINLFNEGAHITFLQIPVVLMSYSFSVIPIILAVWFLSILERFLNSKIHE 240 Query: 239 SVRNILVPMFALLIVIPLTFLAFGPVGSLISEGLASGYTWLYNLSPLVAGAIAGAFWQVF 298 + + L PM L++++PLTFLAFGP+G+ IS+GLASGYT++YNLSP+VAGA GAFWQV Sbjct: 241 AAKTFLTPMICLMLIVPLTFLAFGPLGTFISQGLASGYTFIYNLSPIVAGAFMGAFWQVL 300 Query: 299 VIFGVHWGFVPIMLSNITTLGYDTMLPILAAAVLSQAGAVFGVFLKSKNTQLKALSGSST 358 VIFG+HWGFVPIM++N++ G DTM+ ++ + +QAGA GVFLK+K ++KA++GS+ Sbjct: 301 VIFGIHWGFVPIMINNLSRYGRDTMIAMVGPSNFAQAGASLGVFLKTKKPEVKAIAGSAA 360 Query: 359 LAAVFGITEPTIYGVTLKLKKPFIYACISXXXXXXXXXXXXXXXXXFSLPGLLALPTYFG 418 L FGITEP+IYGVTLK KKPF+ A I+ ++PG+L LP + G Sbjct: 361 LTGFFGITEPSIYGVTLKYKKPFVIASIAGAIGGAIVGAAGSSGAANAIPGILTLPIFIG 420 Query: 419 TGFAWXXXXXXXXXXXXXXXXXXXGFDDPETAVEEKTSQPVVKQEITQIGKELIVSPLTG 478 GF G+ D T++ + + T + E+IVSP+ G Sbjct: 421 KGFVGFILGIAVAYILSAIGTYFFGYKDEMADGIAPTTK---EAKETGVEAEVIVSPIRG 477 Query: 479 ALLPLESLPDEAFASGAMGKGIVIEPSSGLLTSPVKGTVTTVFPTGHAIGITSEGGAELL 538 ++PL + DEAF++G +GKG+ I P G L SPV GT+ T FPTGHAIGI S+ G E+L Sbjct: 478 NIVPLNEVKDEAFSAGLLGKGVAIVPQEGKLISPVNGTIETAFPTGHAIGIRSDKGVEIL 537 Query: 539 IHVGVNTVKLKGKHFQKKVQEGDKVEQGQTLLEFDADAIRAAGFVTATPVIVTNSADYLD 598 +HVG +TV+L GK+F+ V +GD+V GQ LLEFD +AI+A G+ TP++VTN+ YLD Sbjct: 538 LHVGFDTVQLNGKYFKLLVAQGDRVLVGQALLEFDLEAIKADGYDITTPIVVTNTDAYLD 597 Query: 599 VLKNTGTEISNGELLLT 615 VL + ++ + LLT Sbjct: 598 VLISDQKTVNYEDTLLT 614 >Q4EUA7.1 Q4EUA7_LISMO PTS system, glucose subfamily, IIA component domain protein Length = 617 Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 296/617 (47%), Positives = 399/617 (64%), Gaps = 5/617 (0%) Query: 1 MSSKDLSKQIITLVGGESNVNSVFHCATRLRFKLKDNGKADKAALEKTPGVITVVENSGQ 60 M + L+K+I+ VGGE NV SV HCATRLRFKL + KADK +E GVI+VVEN+GQ Sbjct: 1 MDYQKLAKEILANVGGEENVRSVVHCATRLRFKLVNKEKADKKQIESISGVISVVENAGQ 60 Query: 61 FQVVIGNNVSQVFEQIMKETSLQDAEKNGKDDGSEST--GVLGKAVDIISSIFSPIXXXX 118 QV+IGN V V++ + T L D + G++ + L KA+D+IS IF+PI Sbjct: 61 LQVIIGNTVGDVYKALGSFTKLTDDGDSEIAKGTKDSDGNFLSKAIDVISGIFTPILGAL 120 Query: 119 XXXXXXXXXXXXXXXXKWVSATSGTYLILNAASDSVFYFLPVFLAVTAARKFKANQFVSV 178 W++ +SGTY IL AA+DSVFYFLP+ LA TAARKF AN V++ Sbjct: 121 AGGGMLKGLLMILTTFGWLTESSGTYQILYAAADSVFYFLPLILAYTAARKFGANPPVAI 180 Query: 179 AIAGALVYPAVIAAVGSTEALKFLGIPVVLVNYSSSVIPIILAVWVQSYVEKWFRSIIHE 238 A AGALVYP +I + FL IPVVL++YS SVIPIILAVW S +E++ S IHE Sbjct: 181 AAAGALVYPTMINLFNEGAHITFLQIPVVLMSYSFSVIPIILAVWFLSILERFLNSKIHE 240 Query: 239 SVRNILVPMFALLIVIPLTFLAFGPVGSLISEGLASGYTWLYNLSPLVAGAIAGAFWQVF 298 + + L PM L++++PLTFLAFGP+G+ IS+GLASGYT++YNLSP+VAGA GAFWQV Sbjct: 241 AAKTFLTPMICLMLIVPLTFLAFGPLGTFISQGLASGYTFIYNLSPIVAGAFMGAFWQVL 300 Query: 299 VIFGVHWGFVPIMLSNITTLGYDTMLPILAAAVLSQAGAVFGVFLKSKNTQLKALSGSST 358 VIFG+HWGFVPIM++N++ G DTM+ ++ + +QAGA GVFLK+K ++KA++GS+ Sbjct: 301 VIFGIHWGFVPIMINNLSRYGRDTMIAMVGPSNFAQAGASLGVFLKTKKPEVKAIAGSAA 360 Query: 359 LAAVFGITEPTIYGVTLKLKKPFIYACISXXXXXXXXXXXXXXXXXFSLPGLLALPTYFG 418 L FGITEP+IYGVTLK KKPF+ A I+ ++PG+L LP + G Sbjct: 361 LTGFFGITEPSIYGVTLKYKKPFVIASIAGAIGGAIVGAAGSSGAANAIPGILTLPIFIG 420 Query: 419 TGFAWXXXXXXXXXXXXXXXXXXXGFDDPETAVEEKTSQPVVKQEITQIGKELIVSPLTG 478 GF G+ D T++ + + T + E+IVSP+ G Sbjct: 421 KGFVGFILGIAVAYILSAIGTYFFGYKDEMADGIAPTTK---EAKETGVEAEVIVSPIRG 477 Query: 479 ALLPLESLPDEAFASGAMGKGIVIEPSSGLLTSPVKGTVTTVFPTGHAIGITSEGGAELL 538 ++PL + DEAF++G +GKG+ I P G L SPV GT+ T FPTGHAIGI S+ G E+L Sbjct: 478 NIVPLNEVKDEAFSAGLLGKGVAIVPQEGKLISPVNGTIETAFPTGHAIGIRSDKGVEIL 537 Query: 539 IHVGVNTVKLKGKHFQKKVQEGDKVEQGQTLLEFDADAIRAAGFVTATPVIVTNSADYLD 598 +HVG +TV+L GK+F+ V +GD+V GQ LLEFD +AI+A G+ TP++VTN+ YLD Sbjct: 538 LHVGFDTVQLNGKYFKLLVAQGDRVLVGQALLEFDLEAIKADGYDITTPIVVTNTDAYLD 597 Query: 599 VLKNTGTEISNGELLLT 615 VL + ++ + LLT Sbjct: 598 VLISDQKTVNYEDTLLT 614 >B4AMR6.1 B4AMR6_BACPU Pts system beta-glucoside-specific eiibca component (Eiibca-bgl) (Eii-bgl) EC=2.7.1.- EC=2.7.1.69 Length = 619 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 291/621 (46%), Positives = 396/621 (63%), Gaps = 6/621 (0%) Query: 1 MSSKDLSKQIITLVGGESNVNSVFHCATRLRFKLKDNGKADKAALEKTPGVITVVENSGQ 60 MS + L++ II +G E NV+S+ HCATRLRF L D KADKAA+EK GV+TV+E+ GQ Sbjct: 1 MSYRQLAEDIIKHIGTEKNVHSLVHCATRLRFTLNDRSKADKAAIEKLNGVVTVMESGGQ 60 Query: 61 FQVVIGNNVSQVFEQIMKETSL-QDAEKNGKDDGSESTGVLGKAVDIISSIFSPIXXXXX 119 FQVVIGN V +V+ +I + T+L +D+ + G EST + GK VDI+S IF+P+ Sbjct: 61 FQVVIGNTVPEVYREIGEFTNLLEDSTSSSAKSGGESTSLFGKFVDIVSGIFTPLLGVMA 120 Query: 120 XXXXXXXXXXXXXXXKWVSATSGTYLILNAASDSVFYFLPVFLAVTAARKFKANQFVSVA 179 KW+S +Y IL AASDS+FYFLP+ LA T+ARKFKAN FV+V Sbjct: 121 GAGILKGLLGICINAKWLSPEDTSYQILFAASDSLFYFLPLLLAFTSARKFKANPFVAVT 180 Query: 180 IAGALVYPAVIAAVGSTEALKFLGIPVVLVNYSSSVIPIILAVWVQSYVEKWFRSIIHES 239 IAGAL+YP + + F GIPVVL++Y+S+VIPIILAV+V Y+E++F +IHES Sbjct: 181 IAGALIYPTIQELSKGGGDVTFFGIPVVLMSYTSTVIPIILAVFVMGYIERFFNKVIHES 240 Query: 240 VRNILVPMFALLIVIPLTFLAFGPVGSLISEGLASGYTWLYNLSPLVAGAIAGAFWQVFV 299 V+N + P+ L+ V+PLT + FGP G G+A+ +++ SP +AGA+ WQV V Sbjct: 241 VKNFITPLILLVTVVPLTLIVFGPFGVYAGNGIAAVLLKVFSFSPTLAGALIAMAWQVLV 300 Query: 300 IFGVHWGFVPIMLSNITTLGYDTMLPILAAAVLSQAGAVFGVFLKSKNTQLKALSGSSTL 359 IFG+HWG VP++L+NI G D + P A AV SQAGA GV LK+KN +LK+L+GS+ + Sbjct: 301 IFGIHWGLVPVILNNIAVHGKDHIKPATAPAVFSQAGASIGVMLKTKNKKLKSLAGSTAV 360 Query: 360 AAVFGITEPTIYGVTLKLKKPFIYACISXXXXXXXXXXXXXXXXXFSLPGLLALPTYFGT 419 +AVFGITEP +YGVTL+LKKPFI A IS LP LL LP ++G Sbjct: 361 SAVFGITEPAVYGVTLRLKKPFIAAVISAGVGGAIIGYSQSIAIASGLPSLLTLPIFYGQ 420 Query: 420 GFAWXXXXXXXXXXXXXXXXXXXGFDDPETAVEEKTSQPVVKQEITQ---IGKELIVSPL 476 GF GF DP E++T PV + + + SPL Sbjct: 421 GFTGFIIGISVSFVLSIVLTYLIGFKDPVD--EDETPAPVAAPTMENEHGVKAAHVKSPL 478 Query: 477 TGALLPLESLPDEAFASGAMGKGIVIEPSSGLLTSPVKGTVTTVFPTGHAIGITSEGGAE 536 G ++ LE + D+AF+SGA+GKG I PS G L +PV G VTTVFPTGHA G+TSE GAE Sbjct: 479 KGEVIKLEEVQDKAFSSGALGKGAAIIPSEGKLFAPVSGVVTTVFPTGHAYGLTSESGAE 538 Query: 537 LLIHVGVNTVKLKGKHFQKKVQEGDKVEQGQTLLEFDADAIRAAGFVTATPVIVTNSADY 596 +LIH+G++TV+L G+HF KV +G + +G+ L EFD +AI+A+G TPVI+TNS ++ Sbjct: 539 VLIHIGLDTVQLGGQHFTPKVVQGQTITEGELLAEFDIEAIQASGLSVTTPVIITNSGEF 598 Query: 597 LDVLKNTGTEISNGELLLTLI 617 D+++ +I+ G+ L L+ Sbjct: 599 SDIIETEEKQITPGQSFLHLV 619 >A8F9J1.1 A8F9J1_BACP2 PTS family glucose/glucoside (Glc) porter component IIBCA EC=2.7.1.69 Length = 619 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 287/620 (46%), Positives = 395/620 (63%), Gaps = 4/620 (0%) Query: 1 MSSKDLSKQIITLVGGESNVNSVFHCATRLRFKLKDNGKADKAALEKTPGVITVVENSGQ 60 MS + L++ I+ +G E NV+S+ HCATRLRF L D KADKAA+EK GV+TV+E+ GQ Sbjct: 1 MSYRQLAEDIMKHIGTEKNVHSLVHCATRLRFTLNDRSKADKAAIEKLNGVVTVMESGGQ 60 Query: 61 FQVVIGNNVSQVFEQIMKETSL-QDAEKNGKDDGSESTGVLGKAVDIISSIFSPIXXXXX 119 FQVVIGN V +V+ +I + T+L +++ + G EST + GK VDI+S IF+P+ Sbjct: 61 FQVVIGNTVPEVYREIGEFTNLLEESTSSSAKSGGESTSLFGKFVDIVSGIFTPLLGVMA 120 Query: 120 XXXXXXXXXXXXXXXKWVSATSGTYLILNAASDSVFYFLPVFLAVTAARKFKANQFVSVA 179 KW++ +Y IL AASDS+FYFLP+ LA T+ARKFKAN FV+V Sbjct: 121 GAGILKGLLGICINAKWLTPEDTSYQILFAASDSLFYFLPLLLAFTSARKFKANPFVAVT 180 Query: 180 IAGALVYPAVIAAVGSTEALKFLGIPVVLVNYSSSVIPIILAVWVQSYVEKWFRSIIHES 239 IAGAL+YP + + F GIPVVL++Y+S+VIPIILAV+V Y+E++F +IHES Sbjct: 181 IAGALIYPTIQELSKGGGDVTFFGIPVVLMSYTSTVIPIILAVFVMGYIERFFNKVIHES 240 Query: 240 VRNILVPMFALLIVIPLTFLAFGPVGSLISEGLASGYTWLYNLSPLVAGAIAGAFWQVFV 299 V+N + P+ L+ V+PLT + FGP G G+A+ +++ SP +AGA+ WQV V Sbjct: 241 VKNFITPLILLVTVVPLTLIVFGPFGVYAGNGIAAVLLKVFSFSPTLAGALIAMAWQVLV 300 Query: 300 IFGVHWGFVPIMLSNITTLGYDTMLPILAAAVLSQAGAVFGVFLKSKNTQLKALSGSSTL 359 IFG+HWG VP++L+NI G D + P A AV SQAGA GV LK+KN +LK+L+GS+ + Sbjct: 301 IFGIHWGLVPVILNNIAVHGKDHIKPATAPAVFSQAGASIGVMLKTKNKKLKSLAGSTAV 360 Query: 360 AAVFGITEPTIYGVTLKLKKPFIYACISXXXXXXXXXXXXXXXXXFSLPGLLALPTYFGT 419 +AVFGITEP +YGVTL+LKKPFI A IS LP LL LP ++G Sbjct: 361 SAVFGITEPAVYGVTLRLKKPFIAAVISAGVGGAIIGYSQSIAIASGLPSLLTLPIFYGQ 420 Query: 420 GFAWXXXXXXXXXXXXXXXXXXXGFDDP--ETAVEEKTSQPVVKQEITQIGKELIVSPLT 477 GF GF DP E + P ++ E + + SPL Sbjct: 421 GFTGFIMGISVSFVLSIVLTYLIGFKDPVDEDETPAPAAAPTLENE-HGVKAAHVKSPLK 479 Query: 478 GALLPLESLPDEAFASGAMGKGIVIEPSSGLLTSPVKGTVTTVFPTGHAIGITSEGGAEL 537 G ++ LE + D+AF+SGA+GKG I PS G L +PV G VTTVFPTGHA G+TSE GAE+ Sbjct: 480 GEVIKLEEVQDKAFSSGALGKGAAIIPSEGKLFAPVSGVVTTVFPTGHAYGLTSESGAEV 539 Query: 538 LIHVGVNTVKLKGKHFQKKVQEGDKVEQGQTLLEFDADAIRAAGFVTATPVIVTNSADYL 597 LIH+G++TV+L G+HF KV +G + +G+ L EFD +AI+A+G TPVI+TNS ++ Sbjct: 540 LIHIGLDTVQLGGQHFTPKVVQGQTITEGELLAEFDIEAIQASGLSVTTPVIITNSGEFS 599 Query: 598 DVLKNTGTEISNGELLLTLI 617 D+++ +I+ G+ L L+ Sbjct: 600 DIIETEEKQITPGQSFLHLV 619 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,200,580,583 Number of extensions: 125984671 Number of successful extensions: 390495 Number of sequences better than 1.0e-05: 3030 Number of HSP's gapped: 386248 Number of HSP's successfully gapped: 4033 Length of query: 618 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 476 Effective length of database: 1,722,912,073 Effective search space: 820106146748 Effective search space used: 820106146748 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)