BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0011.p (267 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KBK3.1 B3KBK3_9BACI Molybdopterin converting factor, subunit 1 208 5e-52 B1DKG4.1 B1DKG4_9BACL Molybdopterin biosynthesis MoaE protein 201 5e-50 Q67JI8.1 Q67JI8_SYMTH Molybdopterin converting factor-like protein 171 8e-41 C0ZHP4.1 C0ZHP4_BREBN Probable molybdopterin converting factor M... 157 8e-37 B9L0Z7.1 B9L0Z7_THERP Molybdenum cofactor biosynthesis protein D/E 147 8e-34 >B3KBK3.1 B3KBK3_9BACI Molybdopterin converting factor, subunit 1 Length = 245 Score = 208 bits (529), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 118/243 (48%), Positives = 153/243 (62%), Gaps = 10/243 (4%) Query: 30 SMHVTIRLFAGLAEVIGSASLAFHSHESPLTAGRLKELLSASYPEAAPQIKVSLVAIDHE 89 S ++I LFAGLA+ IG+ASLAF PLT G LK LLS ++P+A QI + VA++ E Sbjct: 2 STTISILLFAGLADRIGTASLAFSVPALPLTTGDLKLLLSEAFPDAQSQIATAFVAVNQE 61 Query: 90 YAPDDSVISEASEVALIPPVSGGE----PDAEEQETPDGRFSITDQPLNGEALLDKVLDV 145 YA D +I EVALIPPVSGG+ D + DG +IT L+ E + KV D Sbjct: 62 YALPDQLIQSGDEVALIPPVSGGDGTNLQDTGSSSSSDGTCTITCHRLSVEETIAKVHDD 121 Query: 146 NHGASLLFVXXXXXXXXXXXXXALHYEAYVPMALAKLEEIGREVGERW-NARCAIAHRTG 204 NHGA+L FV L YEAY+PMAL ++++I ++ RW +CAI+HR G Sbjct: 122 NHGATLSFVGTTREITGQMRTVTLEYEAYIPMALKEMQQICMDIHGRWPGTKCAISHRIG 181 Query: 205 LVALKEASVMIAVSAAHRDMCYEASRYAIEKLKASVPVWKKDINDSGEQWLGA-----DP 259 V + E SV+IAVS+ HR+ CYEASRYAIE+LK SVP+WKK+I D G +W GA DP Sbjct: 182 TVGIGETSVVIAVSSPHRETCYEASRYAIEQLKRSVPIWKKEIWDDGSEWKGAQTGPWDP 241 Query: 260 QAK 262 A+ Sbjct: 242 IAR 244 >B1DKG4.1 B1DKG4_9BACL Molybdopterin biosynthesis MoaE protein Length = 249 Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 103/228 (45%), Positives = 144/228 (63%), Gaps = 6/228 (2%) Query: 35 IRLFAGLAEVIGSASLAFHSHESPLTAGRLKELLSASYPEAAPQIKVSLVAIDHEYAPDD 94 I+LFAGL++ GS + + +T LK+ L++ +PE A +++S VA + YA DD Sbjct: 7 IQLFAGLSDRFGSPVIQIETDTPSMTVAALKQELASRFPEQADLVRISFVACNQTYASDD 66 Query: 95 SVISEASEVALIPPVSGGEPDAEEQE-----TPDGRFSITDQPLNGEALLDKVLDVNHGA 149 +VI + E+A++PPVSGGEP+ E E + DGR+ IT Q + + +L KV+ HGA Sbjct: 67 TVIQASDELAVLPPVSGGEPEENEAEGSECSSSDGRYVITKQTITSDEVLAKVIVPEHGA 126 Query: 150 SLLFVXXXXXXXXXXXXXALHYEAYVPMALAKLEEIGREVGERW-NARCAIAHRTGLVAL 208 ++ FV L YEAY PMA+ +E+IG E+ ERW AI+HR G+V L Sbjct: 127 AIAFVGTTREWTNGQRTVRLEYEAYAPMAVRTMEQIGVELEERWPGTLTAISHRIGVVDL 186 Query: 209 KEASVMIAVSAAHRDMCYEASRYAIEKLKASVPVWKKDINDSGEQWLG 256 E SV+IAVS+ HRD CYEASRYAIE+LK VP+WKK+I + G +W G Sbjct: 187 AETSVVIAVSSPHRDACYEASRYAIERLKQIVPIWKKEIWEDGSEWKG 234 >Q67JI8.1 Q67JI8_SYMTH Molybdopterin converting factor-like protein Length = 230 Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 96/224 (42%), Positives = 140/224 (62%), Gaps = 8/224 (3%) Query: 35 IRLFAGLAEVIGSASLAFHSHESPLTAGRLKELLSASYPEAAPQIKVSLVAIDHEYAPDD 94 ++LFA A+ +G +L + T +L E+L+ YP A V VA++ EYAP D Sbjct: 1 MKLFAAAADAVGRRTL--EGDWAGRTTAQLLEILTQQYPNLARLAPVLSVAVNREYAPAD 58 Query: 95 SVISEASEVALIPPVSGGEPDAEEQETPDGRFSITDQPLNGEALLDKVLDVNHGASLLFV 154 V+++ EVALIPPVSGG A++ E P F+IT +PL+ + + +V + + GA+L+FV Sbjct: 59 RVLADGDEVALIPPVSGG---ADDPEPP--LFAITTEPLSADEIAARVTNPHSGATLVFV 113 Query: 155 XXXXXXXXXXXXXALHYEAYVPMALAKLEEIGREVGERW-NARCAIAHRTGLVALKEASV 213 L YEAY MA+A++E+IGRE+ ERW AR AI HR G + + EASV Sbjct: 114 GTVREWTRGRRTVYLEYEAYPEMAVAQMEQIGREIAERWPGARTAIVHRVGRLEIGEASV 173 Query: 214 MIAVSAAHRDMCYEASRYAIEKLKASVPVWKKDINDSGEQWLGA 257 +IAV+ HR +EA R+AIE+LK VP+WKK++ + GE W+G+ Sbjct: 174 VIAVATPHRADAFEACRHAIERLKQIVPIWKKEVWEDGEAWVGS 217 >C0ZHP4.1 C0ZHP4_BREBN Probable molybdopterin converting factor MoaDE Length = 235 Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 90/227 (39%), Positives = 133/227 (58%), Gaps = 10/227 (4%) Query: 31 MHVTIRLFAGLAEVIGSASLAFHSHESPLTAGRLKELLSASYPEAAPQIKVSLVAIDHEY 90 M +TI LFAGLAE + + E T L + + YP + + V+I+HEY Sbjct: 1 MTITILLFAGLAERANAREVQLTLSEGA-TVSDLLQAVEKEYPALSALLGSCFVSINHEY 59 Query: 91 APDDSVISEASEVALIPPVSGGEPDAEEQETPDGRFSITDQPLNGEALLDKVLDVNHGAS 150 A + VIS E+AL+PPVSGGE E P RF+IT++P++ + L+ V + + GA Sbjct: 60 AAKNQVISADDEIALLPPVSGGE------ENP--RFAITEEPISADKLVRLVSNPHAGAI 111 Query: 151 LLFVXXXXXXXXXXXXXALHYEAYVPMALAKLEEIGREVGERW-NARCAIAHRTGLVALK 209 L FV L YEAY PMA+ K++++ E+ ERW A+ A+ HR G + ++ Sbjct: 112 LTFVGTVREFTHGQRTVYLSYEAYAPMAVEKMKQVAAEIEERWPGAQVAMHHRIGHLTVE 171 Query: 210 EASVMIAVSAAHRDMCYEASRYAIEKLKASVPVWKKDINDSGEQWLG 256 E +V+ AV+ AHR+ +EA RYAIE+LK VP+WKK++ + G +W G Sbjct: 172 EIAVVCAVATAHRNESFEAGRYAIERLKQIVPIWKKEMWEDGSEWKG 218 >B9L0Z7.1 B9L0Z7_THERP Molybdenum cofactor biosynthesis protein D/E Length = 237 Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 91/229 (39%), Positives = 124/229 (54%), Gaps = 12/229 (5%) Query: 31 MHVTIRLFAGLAEVIGSASLAFHSHESPLTAGRLKELLSASYPEAAPQIKVSLVAIDHEY 90 M VT+R FA + E++G E T G+L L S P A + +V ++ Y Sbjct: 1 MRVTVRYFAIVRELLGRDREERDLPEG-TTVGQLLAQLCESQPSLARLQRSMMVMVNRRY 59 Query: 91 APDDSVISEASEVALIPPVSGGEPDAEEQETPDGRFSITDQPLNGEALLDKVLDVNHGAS 150 A D ++ E EVAL+PPVSGG TP FSI +PL+ + V D GA Sbjct: 60 ARPDQLLREGDEVALVPPVSGGS-------TP---FSIGPEPLDPRRIEQLVADPRAGAV 109 Query: 151 LLFVXXXXXXXXXXXXXALHYEAYVPMALAKLEEIGREVGERWNAR-CAIAHRTGLVALK 209 +LF+ L YEAY AL +I E+ +RW+ AIAHRTG V + Sbjct: 110 VLFIGTVRDHARGKRVLYLEYEAYAEAALETFAQIAEEIRQRWDVLGIAIAHRTGRVDIG 169 Query: 210 EASVMIAVSAAHRDMCYEASRYAIEKLKASVPVWKKDINDSGEQWLGAD 258 EASV+IAVS+AHR +EA RYAIE+LK P+WKK++ + GE W+G++ Sbjct: 170 EASVVIAVSSAHRAEAFEACRYAIERLKQVAPIWKKEVYEDGEIWIGSE 218 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.131 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,406,788,757 Number of extensions: 50991020 Number of successful extensions: 246281 Number of sequences better than 1.0e-05: 961 Number of HSP's gapped: 245900 Number of HSP's successfully gapped: 961 Length of query: 267 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 134 Effective length of database: 1,807,701,208 Effective search space: 242231961872 Effective search space used: 242231961872 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 130 (54.7 bits)