BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0004.p (453 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KBL2.1 B3KBL2_9BACI Putative uncharacterized protein 605 e-171 C0Z4Y0.1 C0Z4Y0_BREBN Conserved hypothetical membrane protein 449 e-124 C0ZGT9.1 C0ZGT9_BREBN Conserved hypothetical membrane protein 444 e-123 B1DIX1.1 B1DIX1_9BACL Putative uncharacterized protein 399 e-109 C0ZGW1.1 C0ZGW1_BREBN Conserved hypothetical membrane protein 386 e-105 >B3KBL2.1 B3KBL2_9BACI Putative uncharacterized protein Length = 442 Score = 605 bits (1560), Expect = e-171, Method: Compositional matrix adjust. Identities = 295/411 (71%), Positives = 348/411 (84%) Query: 25 GIFVAAEFSLVKVRQSRLTQLVSEGNKMAGYALKVNKKLDAYLSATQFGITLASLGLGWV 84 G+FVAAEFSLVK+RQSRLTQLVSEGN++AG ALKVN+KLDAYLSATQ GITL SLGLGW+ Sbjct: 24 GVFVAAEFSLVKMRQSRLTQLVSEGNRLAGIALKVNQKLDAYLSATQLGITLTSLGLGWI 83 Query: 85 GEPAISELLVEPLMVQIGVTDHTLISTVSVVVGFSIITFLHIVLGELAPKSLAIQKTEGS 144 GEPAISELLV P+M IG D LIST+SV VGF IITFLHIVLGELAPKSLAIQ+TEG+ Sbjct: 84 GEPAISELLVAPIMHSIGFADERLISTISVAVGFCIITFLHIVLGELAPKSLAIQRTEGT 143 Query: 145 ALLLSAPLMFFYNVFLPFIWVLNASANALLRLVGVXXXXXXXXXXXXXXIRILMNQSAKS 204 ALLLSAPL++FY +FLP IWVLNASAN +L+LVG+ IRILM +SA+S Sbjct: 144 ALLLSAPLLWFYRIFLPVIWVLNASANRILKLVGIEPASEAEAAHSEEEIRILMTESARS 203 Query: 205 GVIDKDEMKLMDNIFEFSDLLAREVMLPRTDMDVLYSNLSLEENMRIITETKHSRYPVAF 264 GVID++EMKLMDN+F+FSDL ARE+MLPRTDMDVL++N +LEEN+RI+ ETKHSRYPVA Sbjct: 204 GVIDENEMKLMDNLFDFSDLRAREIMLPRTDMDVLFTNFTLEENLRIVNETKHSRYPVAT 263 Query: 265 EDKDRIIGFIHITDLLFAPLEQQNDLASLVRPILNVPESIEISHALRLMQKNKAQLTLVV 324 ++KDRIIGF+HITDLL A E+Q DL SLVRPI++V ES+EIS LR MQ QL LVV Sbjct: 264 DNKDRIIGFVHITDLLLAEPEKQRDLTSLVRPIMDVSESMEISQVLRKMQARHEQLALVV 323 Query: 325 DEYGGTAGLLTAEEILEEIVGDLHDEFEDERPSVEHNGDYISVEGRMLIEDVNDLTGVVI 384 DEYGGTAG+LTAE+ILEEIVGDL+DEFEDERP +E + SV+GRMLIE+VNDLTG++I Sbjct: 324 DEYGGTAGILTAEKILEEIVGDLYDEFEDERPEIEVYDESFSVDGRMLIEEVNDLTGLMI 383 Query: 385 EDDEVDSIGGWLFKELEGNPSKGKRVVVGDVTFEVEEATRLRITRINIHRE 435 ++ +VDSIGGWLFKELEGNP+ GKR V FEVEE+TRLR+TR+ IH++ Sbjct: 384 DEHDVDSIGGWLFKELEGNPAVGKRATFDGVVFEVEESTRLRVTRVMIHQK 434 >C0Z4Y0.1 C0Z4Y0_BREBN Conserved hypothetical membrane protein Length = 445 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 223/409 (54%), Positives = 302/409 (73%), Gaps = 2/409 (0%) Query: 25 GIFVAAEFSLVKVRQSRLTQLVSEGNKMAGYALKVNKKLDAYLSATQFGITLASLGLGWV 84 G FVAAEFSLVKVRQ+RLTQ+V+EGN+ A YA KV KLDAYLSA Q GITLASLGLGWV Sbjct: 21 GFFVAAEFSLVKVRQTRLTQMVNEGNRRAVYAQKVTHKLDAYLSACQVGITLASLGLGWV 80 Query: 85 GEPAISELLVEPLMVQIGVTDHTLISTVSVVVGFSIITFLHIVLGELAPKSLAIQKTEGS 144 GEPAI+ ++VEPL+ G+ ++ IS +S V F+IITFLHIVLGELAPKSLAIQK E + Sbjct: 81 GEPAIAHMIVEPLLGSSGLPEYA-ISAISFGVAFAIITFLHIVLGELAPKSLAIQKAEMT 139 Query: 145 ALLLSAPLMFFYNVFLPFIWVLNASANALLRLVGVXXXXXXXXXXXXXXIRILMNQSAKS 204 +L ++APLMFFY + P IW LN +ANAL+R +G+ IR+L+NQS +S Sbjct: 140 SLWVAAPLMFFYKLLYPAIWFLNGTANALMRRLGLEAISEHEAAHTEEEIRLLVNQSHQS 199 Query: 205 GVIDKDEMKLMDNIFEFSDLLAREVMLPRTDMDVLYSNLSLEENMRIITETKHSRYPVAF 264 G ID+ E+ L++ +F+FS+ +ARE M+PR DM LY+ + EEN+ II +H+R+PVA Sbjct: 200 GHIDQTELNLVEQVFDFSETVARETMIPRIDMVCLYTTNTFEENLEIIRSQRHTRFPVAA 259 Query: 265 EDKDRIIGFIHITDLLFAPLEQQN-DLASLVRPILNVPESIEISHALRLMQKNKAQLTLV 323 EDKD IIGF+H TD + L++ + +L SL+RP+L VPE++EIS LRLMQKN++QL +V Sbjct: 260 EDKDNIIGFVHATDFYLSALQEGSVELDSLLRPVLTVPETMEISTVLRLMQKNRSQLAIV 319 Query: 324 VDEYGGTAGLLTAEEILEEIVGDLHDEFEDERPSVEHNGDYISVEGRMLIEDVNDLTGVV 383 +DEYGGTAGL+T E+ILEEIVGD+ DEF++ERP +E + +SV G +++ D+ND Sbjct: 320 IDEYGGTAGLVTMEDILEEIVGDIQDEFDEERPEIEKLDNGLSVSGMLVLADLNDHLPFE 379 Query: 384 IEDDEVDSIGGWLFKELEGNPSKGKRVVVGDVTFEVEEATRLRITRINI 432 +E ++VD+IGGWL+ +LE + + G V + F V++ R+TR+ I Sbjct: 380 LESEDVDTIGGWLYSQLEEDIAVGATVEWENHLFTVKQMDHHRVTRVLI 428 >C0ZGT9.1 C0ZGT9_BREBN Conserved hypothetical membrane protein Length = 452 Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust. Identities = 226/412 (54%), Positives = 293/412 (71%), Gaps = 6/412 (1%) Query: 25 GIFVAAEFSLVKVRQSRLTQLVSEGN-KMAGYALKVNKKLDAYLSATQFGITLASLGLGW 83 G FVAAEFSLVKVRQ+RLTQLVSEGN K A YA V ++LDAYLSA Q GITLASLGLGW Sbjct: 23 GFFVAAEFSLVKVRQTRLTQLVSEGNHKSARYAQIVTRELDAYLSACQLGITLASLGLGW 82 Query: 84 VGEPAISELLVEPLMVQIGVTDHTLISTVSVVVGFSIITFLHIVLGELAPKSLAIQKTEG 143 VGEPA++ V P++ + L+ S+ + F+IITFLHIV GELAPKSLAIQK E Sbjct: 83 VGEPAVAHY-VAPVIAFFHFPSY-LVGPTSLAIAFAIITFLHIVFGELAPKSLAIQKAEA 140 Query: 144 SALLLSAPLMFFYNVFLPFIWVLNASANALLRLVGVXXXXXXXXXXXXXXIRILMNQSAK 203 ++L +APLMFFY + P IW+LN +AN L+R +G+ IR+LMNQS K Sbjct: 141 TSLWTAAPLMFFYKLSYPLIWLLNGAANLLIRRLGIEPANENESAHTEEEIRLLMNQSHK 200 Query: 204 SGVIDKDEMKLMDNIFEFSDLLAREVMLPRTDMDVLYSNLSLEENMRIITETKHSRYPVA 263 SG IDK EM L+DN+F FS+ LARE+M+PR DM LY + + +EN+ I+ E++HSR+PVA Sbjct: 201 SGHIDKTEMALVDNVFVFSERLAREIMIPRIDMICLYDDNTFDENLEIMRESRHSRFPVA 260 Query: 264 FEDKDRIIGFIHITDLLFAPLEQ-QNDLASLVRPILNVPESIEISHALRLMQKNKAQLTL 322 EDKDR+IGF+HI+D + L + +L +RP+L VPES+EISH LRLMQK ++QL + Sbjct: 261 HEDKDRLIGFVHISDFYLSALTTGKAELTDFLRPLLTVPESMEISHVLRLMQKRRSQLAI 320 Query: 323 VVDEYGGTAGLLTAEEILEEIVGDLHDEF-EDERPSVEH-NGDYISVEGRMLIEDVNDLT 380 V+DEYGGTAGLLT E ILEEIVGD+ DEF E+ERP +E + + +SV G+ L+ ++ND Sbjct: 321 VIDEYGGTAGLLTMENILEEIVGDIQDEFDENERPEIEESSSNTLSVSGKTLLTELNDYI 380 Query: 381 GVVIEDDEVDSIGGWLFKELEGNPSKGKRVVVGDVTFEVEEATRLRITRINI 432 + + DEVD+I GWL+ +L +KGK V F + E RITR++I Sbjct: 381 SIEVVSDEVDTIAGWLYSQLNEEVAKGKTVTFQGYLFAISELENHRITRVSI 432 >B1DIX1.1 B1DIX1_9BACL Putative uncharacterized protein Length = 466 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 203/414 (49%), Positives = 280/414 (67%), Gaps = 3/414 (0%) Query: 25 GIFVAAEFSLVKVRQSRLTQLVSEGNKMAGYALKVNKKLDAYLSATQFGITLASLGLGWV 84 G+FVAAEF++VKVR +R+ L +EG+ A A + LDAYLSA Q GITLASLGLGW+ Sbjct: 32 GLFVAAEFAMVKVRGTRIETLAAEGHMRAKLASHLTSNLDAYLSACQLGITLASLGLGWI 91 Query: 85 GEPAISELLVEPLMVQIGVTDHTLISTVSVVVGFSIITFLHIVLGELAPKSLAIQKTEGS 144 GEPAI +L +EP + +G + I ++S V+ F IT LHIVLGELAPK+LAI+K E Sbjct: 92 GEPAIKDL-IEPWFLALGWGNPVWIHSISFVIAFLFITILHIVLGELAPKTLAIRKAESV 150 Query: 145 ALLLSAPLMFFYNVFLPFIWVLNASANALLRLVGVXXXXXXXXXXXXXXIRILMNQSAKS 204 LL + PL+ F+ + PFIWVLN AN LL+ +GV IRILM +S KS Sbjct: 151 TLLTATPLVMFHKLMYPFIWVLNGLANQLLKRLGVEPASEQHSAHTEEEIRILMQESHKS 210 Query: 205 GVIDKDEMKLMDNIFEFSDLLAREVMLPRTDMDVLYSNLSLEENMRIITETKHSRYPVAF 264 G+I+ E+ L+DNIFEF++ ARE+M+PRT+M LY +LSLE+N I H+RYPV Sbjct: 211 GLINNTELTLVDNIFEFAETNAREIMIPRTEMVCLYVHLSLEDNKAIALNEMHTRYPVCD 270 Query: 265 EDKDRIIGFIHITDLLFAPLEQQNDLASLVRPILNVPESIEISHALRLMQKNKAQLTLVV 324 DKD IIGF+HI DLL D+ + R I VP+S++IS+ L LMQK KAQ+ +++ Sbjct: 271 HDKDNIIGFVHIKDLLKDTTHSLTDIRQITRAITTVPDSMQISNLLILMQKRKAQIAILI 330 Query: 325 DEYGGTAGLLTAEEILEEIVGDLHDEFEDERPSVEHNGDYI-SVEGRMLIEDVNDLTGVV 383 DEYGGT+GL+T E+I+EEIVG++ DEF++ER +E + + S+ G MLIE+VN G+ Sbjct: 331 DEYGGTSGLVTLEDIMEEIVGEIQDEFDEERAEIEKRDESVYSISGMMLIEEVNSYFGID 390 Query: 384 IEDDEVDSIGGWLFKELEGNPSKGKRV-VVGDVTFEVEEATRLRITRINIHRET 436 IE D D+IGGW++ ++E P+ +R+ G+ F +EE LRI+R+ + + T Sbjct: 391 IESDNYDTIGGWMYSQIEIPPTSEQRIDYGGEYAFIIEETDHLRISRVLVKKLT 444 >C0ZGW1.1 C0ZGW1_BREBN Conserved hypothetical membrane protein Length = 443 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 196/411 (47%), Positives = 281/411 (68%), Gaps = 4/411 (0%) Query: 25 GIFVAAEFSLVKVRQSRLTQLVSEGNKMAGYALKVNKKLDAYLSATQFGITLASLGLGWV 84 G FVA EF++VKVR+SR+ QL +EGNK A +V LDAYLSA Q GITLASLGLGW+ Sbjct: 25 GFFVATEFAIVKVRESRIAQLAAEGNKRAVDVERVLHNLDAYLSACQLGITLASLGLGWL 84 Query: 85 GEPAISELLVEPLMVQIGVTDHTLISTVSVVVGFSIITFLHIVLGELAPKSLAIQKTEGS 144 GEPAI+ LL P+ + + T+++++S ++ FS+ITFLHIVLGELAPK+LAIQ +E Sbjct: 85 GEPAIAHLL-HPVFGYFHLNE-TVVTSISFIIAFSLITFLHIVLGELAPKTLAIQYSEKV 142 Query: 145 ALLLSAPLMFFYNVFLPFIWVLNASANALLRLVGVXXXXXXXXXXXXXXIRILMNQSAKS 204 L ++ P+ FY + PFI +LN SA+ L L + IRIL+N+S KS Sbjct: 143 VLAVAKPIQLFYKIMYPFIQMLNWSASHFLGLFHISLEPHQEAHTEEE-IRILVNESHKS 201 Query: 205 GVIDKDEMKLMDNIFEFSDLLAREVMLPRTDMDVLYSNLSLEENMRIITETKHSRYPVAF 264 G+ID+ E+ L+DNIF+FS+ +ARE+M+PRTDM VL +EN++ + + +RYPV Sbjct: 202 GLIDQTELMLVDNIFDFSETMAREIMVPRTDMVVLNLRDPFDENVKHVQNGRFTRYPVVD 261 Query: 265 EDKDRIIGFIHITDLLFAPLE-QQNDLASLVRPILNVPESIEISHALRLMQKNKAQLTLV 323 DKD ++G +HI D+L LE + +DL + +RPIL VPE+I IS L ++QK + Q+ ++ Sbjct: 262 GDKDHVVGSLHIKDMLTGLLEGESHDLQTFMRPILTVPETISISRLLTMLQKQRGQMAII 321 Query: 324 VDEYGGTAGLLTAEEILEEIVGDLHDEFEDERPSVEHNGDYISVEGRMLIEDVNDLTGVV 383 +DEYGGTAGL+T E+I+EEIVGD+ DEF+DERP VE + +S++GRML+E+ D + Sbjct: 322 IDEYGGTAGLVTLEDIMEEIVGDIQDEFDDERPEVERSDGMLSLDGRMLLEEAGDYLDIE 381 Query: 384 IEDDEVDSIGGWLFKELEGNPSKGKRVVVGDVTFEVEEATRLRITRINIHR 434 +E +VD++ GW++ +++ P G RV G F V E RITR+ + + Sbjct: 382 LESSDVDTLAGWIYMQIDHPPRVGDRVREGKYEFIVGEVDHYRITRVYVKK 432 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,256,971,913 Number of extensions: 91386504 Number of successful extensions: 273194 Number of sequences better than 1.0e-05: 4099 Number of HSP's gapped: 262888 Number of HSP's successfully gapped: 4110 Length of query: 453 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 314 Effective length of database: 1,751,175,118 Effective search space: 549868987052 Effective search space used: 549868987052 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)