BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0005.p (444 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K649.1 B3K649_9BACI Extracellular solute-binding protein family 1 625 e-177 C4ZAM6.1 C4ZAM6_9FIRM Sugar ABC transporter (Sugar-binding protein) 443 e-122 C5EMA3.1 C5EMA3_9FIRM Putative uncharacterized protein 442 e-122 C4G1L9.1 C4G1L9_ABIDE Putative uncharacterized protein 437 e-121 A1R3C4.1 A1R3C4_ARTAT Putative extracellular sugar-binding protein 362 4e-98 >B3K649.1 B3K649_9BACI Extracellular solute-binding protein family 1 Length = 409 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 293/401 (73%), Positives = 344/401 (85%), Gaps = 7/401 (1%) Query: 3 KKMSKAFTGLAVFXXXXXXXXXXXXXXXXXXPDQAGASNAPKEQTVTWLSARPENGAIVQ 62 +KMSK + +A+F + ++ + T+TWL+ARPENGAI+Q Sbjct: 6 RKMSKVLSLIAIFSLVATALAGCGGS-------ENSSAGTKGDNTITWLTARPENGAIIQ 58 Query: 63 TVKELADRFAADHPGFKLDLQVTADRPSYLTKLRTLVASGQMPDFIDSDADPFAQELVNG 122 TV+ELADR++ DHP FKLD+QVTADRPSYLTKLRTLVASG++PDFID+DADP+AQEL + Sbjct: 59 TVRELADRYSEDHPEFKLDIQVTADRPSYLTKLRTLVASGELPDFIDTDADPYAQELADA 118 Query: 123 GLLVDMEKFLKDEGLYDKFYEPALKYQELPDGSLYLLPMEYHMEMTWYNKKIFADNNLTV 182 G+LVDM++FL+++GLYD+FYEPALKYQELPDGSLYLLP+EYH+EMTWYNKKIF +NNLTV Sbjct: 119 GMLVDMKQFLEEQGLYDQFYEPALKYQELPDGSLYLLPLEYHLEMTWYNKKIFEENNLTV 178 Query: 183 PKTLDDLLAVSKALKDKGITPIAVDGVDVWPVLRYAAMYPFRTTGNQFIRDLSQGKAKMS 242 PKT+DD+L +SKALKDKGITPIAVDGVDVWPVLRYAAM PFRTTGN+F R+LSQGKAKM+ Sbjct: 179 PKTIDDMLTISKALKDKGITPIAVDGVDVWPVLRYAAMIPFRTTGNEFARNLSQGKAKMA 238 Query: 243 DAAGMQAANFASQIGKYFQDGFATTDYTTAKNLFLNGQAAMYNMGTWEIPSFVEESLPEG 302 D G+QAANF S+IG+YFQ GFA+TDYTTAKN+FLNG+AAMY MGTWEIPSFV+E+LPE Sbjct: 239 DDVGIQAANFVSEIGQYFQKGFASTDYTTAKNMFLNGEAAMYRMGTWEIPSFVDENLPEQ 298 Query: 303 LKGNVDYFYLPTTSNAVTPDNEFFGNSGIGLGASAKTFDGLPKEFLSYVLKNYSDVYVAK 362 LKG VDYFYLPT ++A TPDNEFFGNSGIGL A+ FD K+FLSYVLKNYSDVYVAK Sbjct: 299 LKGQVDYFYLPTINDAKTPDNEFFGNSGIGLAATTNNFDETTKDFLSYVLKNYSDVYVAK 358 Query: 363 QQMSPLKFTIDDESKFSPLFLRIKKDMDNYGSEFAKPWDTL 403 QQMSPLKFTI+DESK+S LFLRIKKDMD+YGSEFAKPW L Sbjct: 359 QQMSPLKFTIEDESKYSELFLRIKKDMDHYGSEFAKPWGYL 399 >C4ZAM6.1 C4ZAM6_9FIRM Sugar ABC transporter (Sugar-binding protein) Length = 433 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 215/396 (54%), Positives = 282/396 (71%), Gaps = 7/396 (1%) Query: 47 TVTWLSARPENGAIVQTVKELADRFAADHPG-FKLDLQVTADRPSYLTKLRTLVASGQMP 105 TV W ++RP +GAI Q + E+AD ++ G +K++ + TADRPSYL KL+TL+A G MP Sbjct: 40 TVKWFTSRPVDGAIDQVMHEIADEYSEKMGGKWKIEFETTADRPSYLQKLKTLIAGGNMP 99 Query: 106 DFIDSDADPFAQELVNGGLLVDMEKFLKDEGLYDKFYEPALKYQELPDGSLYLLPMEYHM 165 D ID DADP+ QELV+ G+LVD++KFLKD G YD FY ALKYQE DGS+Y LP+EYH+ Sbjct: 100 DIIDIDADPYCQELVDAGMLVDVKKFLKDNGKYDSFYPTALKYQEFTDGSMYTLPLEYHV 159 Query: 166 EMTWYNKKIFADNNLTVPKTLDDLLAVSKALKDKGITPIAVDGVDVWPVLRYAAMYPFRT 225 EMTWYNK+IF L+VPKT+D+ L V K LK+ G+TPI+VDGVD WPV RY AM PFR Sbjct: 160 EMTWYNKEIFDKYGLSVPKTMDEWLDVCKTLKENGVTPISVDGVDRWPVQRYLAMMPFRE 219 Query: 226 TGNQFIRDLSQGKAKMSDAAGMQAANFASQIGKYFQDGFATTDYTTAKNLFLNGQAAMYN 285 +GN +I +L GK KM+ G +AA F IG+YF DGFA TDY TA+++FL+G++AMY Sbjct: 220 SGNDYIINLRDGKEKMAGDEGKEAATFMKNIGQYFNDGFAATDYATAQSMFLDGKSAMYY 279 Query: 286 MGTWEIPSFVEESLPEGLK-GNVDYFYLPTTSNAVTPDNEFFGNSGIGLGASAKTFDGLP 344 +G WEI ++ + K G +DYFYLPT N T +EF NSGIG+ +AKTFD Sbjct: 280 IGDWEIA-----AMQDAYKAGKIDYFYLPTIENGKTDASEFCVNSGIGMAFNAKTFDAKT 334 Query: 345 KEFLSYVLKNYSDVYVAKQQMSPLKFTIDDESKFSPLFLRIKKDMDNYGSEFAKPWDTLL 404 K+F+ YVL NY + Y AKQQMSP+K + + +FS L+LRI+ DMD G++F KPWDT L Sbjct: 335 KDFILYVLDNYGEKYAAKQQMSPIKTELPSDVEFSDLYLRIRDDMDKTGAQFLKPWDTYL 394 Query: 405 DPNTNSVMSDLITKLTMGFVTPEDFAKQIDEAIAKN 440 D +TN+ M D + L G ++ +DF K ID++IA N Sbjct: 395 DADTNTTMQDNLLLLASGDMSVDDFCKLIDDSIATN 430 >C5EMA3.1 C5EMA3_9FIRM Putative uncharacterized protein Length = 439 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 210/408 (51%), Positives = 287/408 (70%), Gaps = 6/408 (1%) Query: 36 QAGASNAPKEQTVT-WLSARPENGAIVQTVKELADRFAADHPG-FKLDLQVTADRPSYLT 93 + G NA + TV W ++RP +G I T++E+A+++ + G +K++++ TADRPSYL Sbjct: 35 ENGKGNADSDVTVVKWFASRPVDGEIDLTMREIAEQYGKEKGGKWKIEVETTADRPSYLQ 94 Query: 94 KLRTLVASGQMPDFIDSDADPFAQELVNGGLLVDMEKFLKDEGLYDKFYEPALKYQELPD 153 KL+TL+A GQMPD ID DADP+ QELV+ G LVD++KFL+DEGLYD+FY AL+YQE D Sbjct: 95 KLKTLIAGGQMPDIIDIDADPYCQELVDAGYLVDVKKFLQDEGLYDRFYPTALRYQEFTD 154 Query: 154 GSLYLLPMEYHMEMTWYNKKIFADNNLTVPKTLDDLLAVSKALKDKGITPIAVDGVDVWP 213 GS+Y LP+EYH+EM WY+K IF +N + VPKT+D+ L V + LKD GITPI+VDG+D WP Sbjct: 155 GSMYTLPLEYHVEMIWYHKDIFKENGVEVPKTMDEWLDVCRTLKDNGITPISVDGIDRWP 214 Query: 214 VLRYAAMYPFRTTGNQFIRDLSQGKAKMSDAAGMQAANFASQIGKYFQDGFATTDYTTAK 273 V RY AM PFR TGN++I +L GKA M D G QA F +IG+YF +GF TDY TA+ Sbjct: 215 VQRYIAMMPFRMTGNEYIINLRDGKASMGDETGRQAVEFLQEIGQYFNEGFGATDYATAQ 274 Query: 274 NLFLNGQAAMYNMGTWEIPSFVEESLPEGLKGNVDYFYLPTTSNAVTPDNEFFGNSGIGL 333 ++FL+G++AMY +G WE + +E G VDYFYLPT A T NEF NSGIG+ Sbjct: 275 SMFLDGKSAMYYIGDWEQAAMLEAYNA----GKVDYFYLPTAEGAKTGANEFCVNSGIGM 330 Query: 334 GASAKTFDGLPKEFLSYVLKNYSDVYVAKQQMSPLKFTIDDESKFSPLFLRIKKDMDNYG 393 + +TFD K+F+ YV++NY +Y + QMSP+K + + +F+ L+LRI++DM+ G Sbjct: 331 AFNTQTFDAKTKDFIKYVIENYGKIYAGRMQMSPIKTELPGDIQFTDLYLRIREDMEKTG 390 Query: 394 SEFAKPWDTLLDPNTNSVMSDLITKLTMGFVTPEDFAKQIDEAIAKNT 441 F KPWDT LD +TN+VM D + L G +T +DF K +D+AIA N Sbjct: 391 ENFLKPWDTYLDVDTNTVMQDNMLLLAAGDMTVDDFIKIVDDAIASNV 438 >C4G1L9.1 C4G1L9_ABIDE Putative uncharacterized protein Length = 464 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 212/406 (52%), Positives = 279/406 (68%), Gaps = 5/406 (1%) Query: 37 AGASNAPKEQTVTWLSARPENGAIVQTVKELADRFAADHPG-FKLDLQVTADRPSYLTKL 95 A + N + TV W ++RP +GAI Q + E+AD ++ G +K++ + TADRPSYL KL Sbjct: 61 AKSGNNDEVTTVKWFTSRPVDGAIDQAMHEIADEYSEKMGGKWKIEFETTADRPSYLQKL 120 Query: 96 RTLVASGQMPDFIDSDADPFAQELVNGGLLVDMEKFLKDEGLYDKFYEPALKYQELPDGS 155 +TL+A G MPD ID DADP+ QELV+ G+LVD++KFL+D G YD FY ALKYQE +GS Sbjct: 121 KTLIAGGNMPDIIDIDADPYCQELVDAGMLVDVKKFLQDNGKYDSFYPTALKYQEFTNGS 180 Query: 156 LYLLPMEYHMEMTWYNKKIFADNNLTVPKTLDDLLAVSKALKDKGITPIAVDGVDVWPVL 215 +Y LP+EYH+EMTWYNK+IF NL+ PKT+D+ L V K LK+ G+TPI+VDGVD WP+ Sbjct: 181 MYTLPLEYHVEMTWYNKEIFKKYNLSAPKTMDEWLTVCKTLKENGVTPISVDGVDRWPIQ 240 Query: 216 RYAAMYPFRTTGNQFIRDLSQGKAKMSDAAGMQAANFASQIGKYFQDGFATTDYTTAKNL 275 RY AM PFR +GN +I L G+ KMSD G +AA F IG+YF DGFA TDY TA+++ Sbjct: 241 RYIAMMPFRRSGNDYIIKLRDGEEKMSDKVGKEAATFMKDIGQYFNDGFAATDYATAQSM 300 Query: 276 FLNGQAAMYNMGTWEIPSFVEESLPEGLKGNVDYFYLPTTSNAVTPDNEFFGNSGIGLGA 335 FL+G++AMY +G WEI + E G VDYFYLPT ++ T EF NSGIG+ Sbjct: 301 FLDGKSAMYYIGDWEIAAMQEAYEA----GKVDYFYLPTVADGKTDATEFCVNSGIGMAF 356 Query: 336 SAKTFDGLPKEFLSYVLKNYSDVYVAKQQMSPLKFTIDDESKFSPLFLRIKKDMDNYGSE 395 + KTFD K+F YVL NY Y AKQQMSP+K + + KFS L+++I+ DM+ G Sbjct: 357 NTKTFDEKTKDFALYVLDNYGKKYAAKQQMSPIKTELPKDMKFSDLYMKIRGDMEKTGEH 416 Query: 396 FAKPWDTLLDPNTNSVMSDLITKLTMGFVTPEDFAKQIDEAIAKNT 441 F KPWDT LD +TN+ M D + L G ++ +DF K ID++IA N Sbjct: 417 FLKPWDTYLDADTNTTMQDNLLLLASGDMSVDDFCKLIDDSIAMNV 462 >A1R3C4.1 A1R3C4_ARTAT Putative extracellular sugar-binding protein Length = 445 Score = 362 bits (929), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 176/410 (42%), Positives = 255/410 (62%), Gaps = 3/410 (0%) Query: 34 PDQAGASNAPKEQTVTWLSARPENGAIVQTVKELADRFAADHPGFKLDLQVTADRPSYLT 93 P + K + ++WL +RP +GA++ +K+LAD +A DHPGF L+L T DRPSY+ Sbjct: 30 PSNVSPTGEIKPREISWLLSRPADGAVINIMKKLADDYAEDHPGFALNLITTPDRPSYIQ 89 Query: 94 KLRTLVASGQMPDFIDSDADPFAQELVNGGLLVDMEKFLKDEGLYDKFYEPALKYQELPD 153 KL TL A+ ++P+ D+DA PFAQEL G +VD +K LK +YD + AL YQ D Sbjct: 90 KLETLAAANKLPELFDTDATPFAQELAKQGKMVDADKLLKSLNVYDDYRPGALDYQRFDD 149 Query: 154 GSLYLLPMEYHMEMTWYNKKIFADNNLTVPKTLDDLLAVSKALKDKGITPIAVDGVDVWP 213 GSLY++P ++ +E WYNK + ++VPK+LDD+ A+ AL++ GITPIA+DG D WP Sbjct: 150 GSLYMIPFQFELEFIWYNKALMEKAGVSVPKSLDDIPAMCTALRNAGITPIAIDGQDQWP 209 Query: 214 VLRYAAMYPFRTTGNQFIRDLSQGKAKMSDAAGMQAANFASQIG--KYFQDGFATTDYTT 271 + RY A PFR G F++ L +G+A SD AG + N+ + +G K FQ+GF+ Y+ Sbjct: 210 LERYVAYQPFREAGPDFVQKLKKGEASFSDEAGQKTVNWMADLGKAKCFQEGFSAQGYSD 269 Query: 272 AKNLFLNGQAAMYNMGTWEIPSFVEESLPEGLKGNVDYFYLPTTSNAVTPDNEFFGNSGI 331 A+N F +GQAAMYN+GTWE+PS + L ++ ++D+F LPTT +VT NEF SGI Sbjct: 270 AQNQFTSGQAAMYNIGTWELPSLATDKLNPDVRDDIDFFTLPTTEGSVTSANEFVSPSGI 329 Query: 332 GLGASAKTFDGLPKEFLSYVLKNYSDVYVAKQQMSP-LKFTIDDESKFSPLFLRIKKDMD 390 G+ ++KT+D L +FL + L+ Y Y A +SP + +PL+ + + D Sbjct: 330 GMAVNSKTYDPLVSDFLKFALEKYPAEYAATGALSPTTNVQTAIPANATPLYKKALETAD 389 Query: 391 NYGSEFAKPWDTLLDPNTNSVMSDLITKLTMGFVTPEDFAKQIDEAIAKN 440 G + A PWDT LDP TN + + L G +TPE F K +D+AI +N Sbjct: 390 TLGGKQAMPWDTQLDPTTNGRLQQELVLLVQGNITPEQFTKTMDDAIKQN 439 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.133 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,572,199,243 Number of extensions: 112682866 Number of successful extensions: 317438 Number of sequences better than 1.0e-05: 893 Number of HSP's gapped: 317126 Number of HSP's successfully gapped: 894 Length of query: 444 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 305 Effective length of database: 1,751,175,118 Effective search space: 534108410990 Effective search space used: 534108410990 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)