BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0044.p (295 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C5D956.1 C5D956_9BACI UTP-glucose-1-phosphate uridylyltransferase 431 e-119 Q5WBM9.1 Q5WBM9_BACSK UTP-glucose-1-phosphate uridylyltransferas... 431 e-119 Q5WDC8.1 Q5WDC8_BACSK UTP-glucose-1-phosphate uridylyltransferas... 428 e-118 Q5KUN1.1 Q5KUN1_GEOKA UTP-glucose-1-phosphate uridylyltransferas... 427 e-118 C2RG47.1 C2RG47_BACCE UTP--glucose-1-phosphate uridylyltransferase 426 e-118 >C5D956.1 C5D956_9BACI UTP-glucose-1-phosphate uridylyltransferase Length = 296 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 209/295 (70%), Positives = 245/295 (83%) Query: 1 MKKVKKVIIPAAGLGTRFLPATKAMPKEMLPIINKPTIQYIVEEAIASGIEDIIIVTGKG 60 MKKV+K IIPAAGLGTRFLPATKAMPKEMLPI++KPTIQYIVEEAIASGIEDIIIVTGKG Sbjct: 1 MKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIVEEAIASGIEDIIIVTGKG 60 Query: 61 KRAIEDHFDNAFELESRXXXXXXXXXXXXVQRSSKVEIHYIRQKEPKGLGHAVWCARRFI 120 KRAIEDHFDNA+ELE V+ SKV+IHYIRQKEPKGLGHAVWCAR FI Sbjct: 61 KRAIEDHFDNAYELEQILMKQGKLDLLEKVKEPSKVDIHYIRQKEPKGLGHAVWCARNFI 120 Query: 121 GDEPFGVMLGDDIVTGKVPCLKQLIDQYEETQNSVIGVQEIPDEFTNRYGIIEPDLQDGR 180 GDEPF V+LGDDIV + PCLKQLIDQYE+T +SVIGV+ +PDE T+RYGII+P Q GR Sbjct: 121 GDEPFAVLLGDDIVQAETPCLKQLIDQYEQTFSSVIGVKRVPDEETHRYGIIDPLEQHGR 180 Query: 181 LYRVNNFVEKPAIGTAPSNLAIMGRYVFTPKIFKYLDLQEKGAGGEIQLTDAIQKLNQSE 240 Y+V FVEKPA GTAPSNLAIMGRY+ TP+IF +L+ QE GAGGEIQLTDAIQKLN+ + Sbjct: 181 RYQVRQFVEKPAPGTAPSNLAIMGRYILTPEIFLFLEKQEAGAGGEIQLTDAIQKLNEIQ 240 Query: 241 RVYAYNFDGTRYDVGERLGYILTTLEFALESEDLRYPVMDAMAEYLSKAGQTLNS 295 RV+AY F+G RYDVGE+LG+I TT+EFAL++E+LR ++ M + +++ Q N+ Sbjct: 241 RVFAYEFEGKRYDVGEKLGFIQTTIEFALQNEELRDDLLAFMEKIVTETKQNTNA 295 >Q5WBM9.1 Q5WBM9_BACSK UTP-glucose-1-phosphate uridylyltransferase EC=2.7.7.9 Length = 293 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 202/288 (70%), Positives = 244/288 (84%) Query: 1 MKKVKKVIIPAAGLGTRFLPATKAMPKEMLPIINKPTIQYIVEEAIASGIEDIIIVTGKG 60 M KVKK IIPAAGLGTRFLPATKAMPKEMLPI++KPTIQYI+EEAI +GIEDIIIVTGKG Sbjct: 1 MSKVKKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIIEEAIEAGIEDIIIVTGKG 60 Query: 61 KRAIEDHFDNAFELESRXXXXXXXXXXXXVQRSSKVEIHYIRQKEPKGLGHAVWCARRFI 120 KRAIEDHFD++FELE VQ SSKVE+HYIRQKEPKGLGHAVWCAR+FI Sbjct: 61 KRAIEDHFDHSFELEQNLFNKGKLDMLEKVQASSKVELHYIRQKEPKGLGHAVWCARKFI 120 Query: 121 GDEPFGVMLGDDIVTGKVPCLKQLIDQYEETQNSVIGVQEIPDEFTNRYGIIEPDLQDGR 180 G+EPF V+LGDDIV + P LKQL++QY++T+ SVIGVQ +P+ T+RYGII+P+ Q+GR Sbjct: 121 GNEPFAVLLGDDIVQAETPGLKQLMNQYDQTERSVIGVQPVPENETHRYGIIDPESQNGR 180 Query: 181 LYRVNNFVEKPAIGTAPSNLAIMGRYVFTPKIFKYLDLQEKGAGGEIQLTDAIQKLNQSE 240 LYRV++FVEKP GTAPSNLAIMGRY+ TP+IF +L+ QE GAGGEIQLTDAIQ LN+ + Sbjct: 181 LYRVSSFVEKPKQGTAPSNLAIMGRYILTPEIFTFLEKQETGAGGEIQLTDAIQTLNEQQ 240 Query: 241 RVYAYNFDGTRYDVGERLGYILTTLEFALESEDLRYPVMDAMAEYLSK 288 VYAY+F+G R+DVGE+LG++LT LEFALE E+LR P++ M E++S+ Sbjct: 241 SVYAYDFEGKRFDVGEKLGFVLTQLEFALEREELREPLLQKMREFISE 288 >Q5WDC8.1 Q5WDC8_BACSK UTP-glucose-1-phosphate uridylyltransferase EC=2.7.7.9 Length = 294 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 203/287 (70%), Positives = 241/287 (83%) Query: 1 MKKVKKVIIPAAGLGTRFLPATKAMPKEMLPIINKPTIQYIVEEAIASGIEDIIIVTGKG 60 MK +KK IIPAAGLGTRFLPATKAMPKEMLPI++KPTIQYIVEEAI SGIEDIIIVTGKG Sbjct: 1 MKPIKKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIVEEAIESGIEDIIIVTGKG 60 Query: 61 KRAIEDHFDNAFELESRXXXXXXXXXXXXVQRSSKVEIHYIRQKEPKGLGHAVWCARRFI 120 KRAIEDHFD+AFELE VQ++ KV+IHYIRQKEPKGLGHAVWCAR+FI Sbjct: 61 KRAIEDHFDHAFELEENLAKKEKFELLEAVQQAGKVDIHYIRQKEPKGLGHAVWCARKFI 120 Query: 121 GDEPFGVMLGDDIVTGKVPCLKQLIDQYEETQNSVIGVQEIPDEFTNRYGIIEPDLQDGR 180 G+EPF V+LGDDIV + PCLKQLI+QYEE Q S+IGVQ++P E TNRYGII+P Q+GR Sbjct: 121 GNEPFAVLLGDDIVQHEKPCLKQLIEQYEEKQASIIGVQQVPREETNRYGIIDPANQEGR 180 Query: 181 LYRVNNFVEKPAIGTAPSNLAIMGRYVFTPKIFKYLDLQEKGAGGEIQLTDAIQKLNQSE 240 LY V+ FVEKP + APSNLAI+GRY+ TP+IF +L+ QE GAGGEIQLTDAIQKLN+ + Sbjct: 181 LYGVSRFVEKPKVEEAPSNLAILGRYLLTPEIFAHLEKQETGAGGEIQLTDAIQKLNEEQ 240 Query: 241 RVYAYNFDGTRYDVGERLGYILTTLEFALESEDLRYPVMDAMAEYLS 287 +VYAY+F+G RYDVGE+LG++LTTLEFA++ E+L+ ++ M EYL Sbjct: 241 QVYAYDFEGKRYDVGEKLGFVLTTLEFAIQREELKPALIKKMKEYLE 287 >Q5KUN1.1 Q5KUN1_GEOKA UTP-glucose-1-phosphate uridylyltransferase EC=2.7.7.9 Length = 294 Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust. Identities = 206/287 (71%), Positives = 239/287 (83%) Query: 1 MKKVKKVIIPAAGLGTRFLPATKAMPKEMLPIINKPTIQYIVEEAIASGIEDIIIVTGKG 60 MKKV+K IIPAAGLGTRFLPATKAMPKEMLPI++KPTIQYIVEEA+ASGIEDIIIVTGKG Sbjct: 1 MKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIVEEAVASGIEDIIIVTGKG 60 Query: 61 KRAIEDHFDNAFELESRXXXXXXXXXXXXVQRSSKVEIHYIRQKEPKGLGHAVWCARRFI 120 KRAIEDHFDNAFELE V+ SKV+IHYIRQKEPKGLGHAVWCAR FI Sbjct: 61 KRAIEDHFDNAFELEQNLIQKGKYDLLEKVKEPSKVDIHYIRQKEPKGLGHAVWCARNFI 120 Query: 121 GDEPFGVMLGDDIVTGKVPCLKQLIDQYEETQNSVIGVQEIPDEFTNRYGIIEPDLQDGR 180 GDEPF V+LGDDIV + PCLKQLIDQYE+T +SVIGV+ +PD T+RYGII+P Q GR Sbjct: 121 GDEPFAVLLGDDIVQAETPCLKQLIDQYEQTLSSVIGVKRVPDNETHRYGIIDPIEQHGR 180 Query: 181 LYRVNNFVEKPAIGTAPSNLAIMGRYVFTPKIFKYLDLQEKGAGGEIQLTDAIQKLNQSE 240 Y+V FVEKPA GTAPSNLAIMGRY+ TP+IF +L+ QE GAGGEIQLTDAIQKLN+ + Sbjct: 181 RYQVRQFVEKPAPGTAPSNLAIMGRYILTPEIFLFLEKQEAGAGGEIQLTDAIQKLNEIQ 240 Query: 241 RVYAYNFDGTRYDVGERLGYILTTLEFALESEDLRYPVMDAMAEYLS 287 RV+AY F+G RYDVGE+LG+I TT+EFAL+ ++LR ++ M + L+ Sbjct: 241 RVFAYEFEGKRYDVGEKLGFIQTTIEFALQHDELREDLIQFMEKLLN 287 >C2RG47.1 C2RG47_BACCE UTP--glucose-1-phosphate uridylyltransferase Length = 293 Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust. Identities = 203/290 (70%), Positives = 240/290 (82%) Query: 1 MKKVKKVIIPAAGLGTRFLPATKAMPKEMLPIINKPTIQYIVEEAIASGIEDIIIVTGKG 60 MKKV+K IIPAAGLGTRFLPATKAMPKEMLPI++KPTIQYIVEEAI SGIEDIIIVTGKG Sbjct: 1 MKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIVEEAIESGIEDIIIVTGKG 60 Query: 61 KRAIEDHFDNAFELESRXXXXXXXXXXXXVQRSSKVEIHYIRQKEPKGLGHAVWCARRFI 120 KRAIEDHFD++FELE VQ SSK+ IHYIRQKEPKGLGHAVWCAR+FI Sbjct: 61 KRAIEDHFDHSFELEQSLLEKGKHEMLEKVQASSKINIHYIRQKEPKGLGHAVWCARKFI 120 Query: 121 GDEPFGVMLGDDIVTGKVPCLKQLIDQYEETQNSVIGVQEIPDEFTNRYGIIEPDLQDGR 180 G+EPF V+LGDDIV + PCL+QL+DQYE TQ+SVIGVQ +P+ T+RYGII+P Q+ R Sbjct: 121 GNEPFAVLLGDDIVQAETPCLRQLMDQYEGTQSSVIGVQTVPENETHRYGIIDPIEQNNR 180 Query: 181 LYRVNNFVEKPAIGTAPSNLAIMGRYVFTPKIFKYLDLQEKGAGGEIQLTDAIQKLNQSE 240 Y+V FVEKPA GTAPSNLAIMGRYV TP+IF +L+ Q+ GAGGEIQLTDAIQ+LN+ + Sbjct: 181 RYQVRQFVEKPAQGTAPSNLAIMGRYVLTPEIFMFLENQQTGAGGEIQLTDAIQRLNEVQ 240 Query: 241 RVYAYNFDGTRYDVGERLGYILTTLEFALESEDLRYPVMDAMAEYLSKAG 290 RV+AY+F+GTRYDVGE+ G+I TT+E AL++E+L +M M E + K G Sbjct: 241 RVFAYDFEGTRYDVGEKFGFIKTTIEMALQNEELNVELMKYMKELVKKEG 290 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.139 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,694,407,407 Number of extensions: 71679818 Number of successful extensions: 172209 Number of sequences better than 1.0e-05: 3179 Number of HSP's gapped: 167654 Number of HSP's successfully gapped: 3180 Length of query: 295 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 161 Effective length of database: 1,798,280,193 Effective search space: 289523111073 Effective search space used: 289523111073 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)