BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0043.p (230 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A4ITE8.1 A4ITE8_GEOTN Priming glycosyltransferase 271 5e-71 C3H976.1 C3H976_BACTU Sugar transferase 260 7e-68 C2NQN3.1 C2NQN3_BACCE Sugar transferase 256 2e-66 C1F0J5.1 C1F0J5_BACC3 Galactosyl transferase CpsE EC=2.7.8.- 255 2e-66 A0RL67.1 A0RL67_BACAH Sugar transferase 255 2e-66 >A4ITE8.1 A4ITE8_GEOTN Priming glycosyltransferase Length = 224 Score = 271 bits (692), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 134/210 (63%), Positives = 157/210 (74%) Query: 21 HAKEGSKEMDSYLVMKRIIDIFFSAXXXXXXXXXXXXXXXXXKLEDPKGKVFFRQNRVGK 80 H + + YL+ KRI+DI + KLEDPKG VFF+Q RVGK Sbjct: 15 HHQVVVNDRKGYLIAKRIMDICGALAGLICLSWLFLIVALLIKLEDPKGPVFFKQIRVGK 74 Query: 81 DEKLFPMYKFRSMVSNAEELKANLMAYNEVSGAMFKIKNDPRITRIGRFLRKTSIDELPQ 140 D K F MYKFRSMV+NAEEL +L+ NE +GAMFK+KNDPR+T+IGRF+RKTSIDELPQ Sbjct: 75 DGKEFYMYKFRSMVTNAEELLDSLLHLNETTGAMFKMKNDPRVTKIGRFIRKTSIDELPQ 134 Query: 141 LWNVLLGHMSLVGPRPPLVEEVAQYTDYDKQRLMVTPGCTGYWQVNARNSVGFDEMVQLD 200 LWNVL G MSLVGPRPPL EVAQYT+YDKQRL+VTPGCTG WQV+ R++VGF+EMV+LD Sbjct: 135 LWNVLKGEMSLVGPRPPLPREVAQYTEYDKQRLLVTPGCTGLWQVSGRSNVGFEEMVELD 194 Query: 201 LTYISIRSTMLDLKIIAKTGLMLLGSKDAY 230 L YI RS + DLKII KT L+L GSKDAY Sbjct: 195 LKYIRERSILFDLKIIFKTILLLFGSKDAY 224 >C3H976.1 C3H976_BACTU Sugar transferase Length = 226 Score = 260 bits (664), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 132/212 (62%), Positives = 157/212 (74%), Gaps = 1/212 (0%) Query: 19 MLHAKEGSKEMDSYLVMKRIIDIFFSAXXXXXXXXXXXXXXXXXKLEDPKGKVFFRQNRV 78 ML A+E ++ + YL MKR+IDI S KLEDPKG + F+Q RV Sbjct: 16 MLVAEEINQSV-FYLFMKRVIDILGSLCGLIFLFPVLLVIALLIKLEDPKGSILFKQVRV 74 Query: 79 GKDEKLFPMYKFRSMVSNAEELKANLMAYNEVSGAMFKIKNDPRITRIGRFLRKTSIDEL 138 GK+EK F MYKFRSMV++AEE +L+ +NEVSGAMFK+K DPR+T+IG+F+RKTSIDEL Sbjct: 75 GKNEKEFGMYKFRSMVTDAEERLKDLLEHNEVSGAMFKMKEDPRVTKIGKFIRKTSIDEL 134 Query: 139 PQLWNVLLGHMSLVGPRPPLVEEVAQYTDYDKQRLMVTPGCTGYWQVNARNSVGFDEMVQ 198 PQL NVL G MSLVGPRPPL EV +YT YDKQRL+VTPGCTG WQV RNSVGF EMV+ Sbjct: 135 PQLLNVLKGEMSLVGPRPPLPREVKEYTLYDKQRLLVTPGCTGLWQVTERNSVGFAEMVE 194 Query: 199 LDLTYISIRSTMLDLKIIAKTGLMLLGSKDAY 230 LDLTYI R+ D K+I KT L+L+GSKDAY Sbjct: 195 LDLTYIKKRNIRFDCKLILKTVLVLVGSKDAY 226 >C2NQN3.1 C2NQN3_BACCE Sugar transferase Length = 224 Score = 256 bits (653), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 127/207 (61%), Positives = 151/207 (72%) Query: 24 EGSKEMDSYLVMKRIIDIFFSAXXXXXXXXXXXXXXXXXKLEDPKGKVFFRQNRVGKDEK 83 E + SY+ MKR+IDI S KLEDPKG VFF+Q RVGKDEK Sbjct: 18 ENINQKRSYIFMKRLIDIVGSFCGIIILLPVFIIVAICIKLEDPKGPVFFKQIRVGKDEK 77 Query: 84 LFPMYKFRSMVSNAEELKANLMAYNEVSGAMFKIKNDPRITRIGRFLRKTSIDELPQLWN 143 F MYKFRSMV++AEE +L+ +NEVSGAMFK+K+DPR+T+IG+F+RKTSIDELPQL N Sbjct: 78 DFGMYKFRSMVTDAEEKLQDLLQHNEVSGAMFKMKDDPRVTKIGKFIRKTSIDELPQLIN 137 Query: 144 VLLGHMSLVGPRPPLVEEVAQYTDYDKQRLMVTPGCTGYWQVNARNSVGFDEMVQLDLTY 203 VL G MSLVGPRPPL+ EV YT YDKQRL V PGCTG WQV+ R+++GF EMV+LDL Y Sbjct: 138 VLKGEMSLVGPRPPLLREVKTYTAYDKQRLKVIPGCTGLWQVSGRSNIGFREMVELDLYY 197 Query: 204 ISIRSTMLDLKIIAKTGLMLLGSKDAY 230 I RS + D KII KT +L GSKDA+ Sbjct: 198 IQYRSILFDFKIILKTVFVLFGSKDAF 224 >C1F0J5.1 C1F0J5_BACC3 Galactosyl transferase CpsE EC=2.7.8.- Length = 226 Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 127/207 (61%), Positives = 151/207 (72%) Query: 24 EGSKEMDSYLVMKRIIDIFFSAXXXXXXXXXXXXXXXXXKLEDPKGKVFFRQNRVGKDEK 83 E + SY+ MKR+IDI S KLEDPKG VFF+Q RVGKDEK Sbjct: 20 ENINQKRSYIFMKRLIDIVGSFCGIIILLPVFIIVAICIKLEDPKGPVFFKQIRVGKDEK 79 Query: 84 LFPMYKFRSMVSNAEELKANLMAYNEVSGAMFKIKNDPRITRIGRFLRKTSIDELPQLWN 143 F MYKFRSMV++AEE +L+ +NEVSGAMFK+K+DPR+T+IG+F+RKTSIDELPQL N Sbjct: 80 DFGMYKFRSMVTDAEEKLQDLLQHNEVSGAMFKMKDDPRVTKIGKFIRKTSIDELPQLIN 139 Query: 144 VLLGHMSLVGPRPPLVEEVAQYTDYDKQRLMVTPGCTGYWQVNARNSVGFDEMVQLDLTY 203 VL G MSLVGPRPPL+ EV YT YDKQRL V PGCTG WQV+ R+++GF EMV+LDL Y Sbjct: 140 VLKGEMSLVGPRPPLLREVKTYTAYDKQRLKVIPGCTGLWQVSGRSNIGFREMVELDLYY 199 Query: 204 ISIRSTMLDLKIIAKTGLMLLGSKDAY 230 I RS + D KII KT +L GSKDA+ Sbjct: 200 IQYRSILFDFKIILKTVFVLFGSKDAF 226 >A0RL67.1 A0RL67_BACAH Sugar transferase Length = 226 Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 126/207 (60%), Positives = 151/207 (72%) Query: 24 EGSKEMDSYLVMKRIIDIFFSAXXXXXXXXXXXXXXXXXKLEDPKGKVFFRQNRVGKDEK 83 E + SY+ MKR+IDI S KLEDPKG VFF+Q R+GKDEK Sbjct: 20 ENINQKRSYIFMKRLIDIVGSFCGIIILLPVFIIVAICIKLEDPKGPVFFKQMRIGKDEK 79 Query: 84 LFPMYKFRSMVSNAEELKANLMAYNEVSGAMFKIKNDPRITRIGRFLRKTSIDELPQLWN 143 F MYKFRSMV++AEE +L+ +NEVSGAMFK+K+DPR+T+IG+F+RKTSIDELPQL N Sbjct: 80 DFGMYKFRSMVTDAEEKLQDLLQHNEVSGAMFKMKDDPRVTKIGKFIRKTSIDELPQLIN 139 Query: 144 VLLGHMSLVGPRPPLVEEVAQYTDYDKQRLMVTPGCTGYWQVNARNSVGFDEMVQLDLTY 203 VL G MSLVGPRPPL+ EV YT YDKQRL V PGCTG WQV+ R+++GF EMV+LDL Y Sbjct: 140 VLKGEMSLVGPRPPLLREVKTYTAYDKQRLKVIPGCTGLWQVSGRSNIGFREMVELDLYY 199 Query: 204 ISIRSTMLDLKIIAKTGLMLLGSKDAY 230 I RS + D KII KT +L GSKDA+ Sbjct: 200 IQYRSILFDFKIILKTVFVLFGSKDAF 226 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.137 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,199,581,432 Number of extensions: 42567763 Number of successful extensions: 87501 Number of sequences better than 1.0e-05: 2650 Number of HSP's gapped: 83680 Number of HSP's successfully gapped: 2651 Length of query: 230 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 99 Effective length of database: 1,826,543,238 Effective search space: 180827780562 Effective search space used: 180827780562 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)