BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0042.p (313 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q4MV33.1 Q4MV33_BACCE Glycosyl transferase, group 2 family protein 266 2e-69 B7K6R8.1 B7K6R8_CYAP7 Glycosyl transferase family 2 168 6e-40 B8HT95.1 B8HT95_CYAP4 Glycosyl transferase family 2 162 4e-38 Q10X94.1 Q10X94_TRIEI Glycosyl transferase, family 2 161 7e-38 B6IU33.1 B6IU33_RHOCS Glycosyl transferase, family 2, putative E... 154 1e-35 >Q4MV33.1 Q4MV33_BACCE Glycosyl transferase, group 2 family protein Length = 300 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 128/290 (44%), Positives = 185/290 (63%), Gaps = 2/290 (0%) Query: 11 KISIIICTYNRSAXXXXXXXXXXXXENLDQAEVIVVDNSSKDDTAAVVKRFIEAEGANMD 70 +++I ICTYNRS+ +N+++AE+I+VDN+S D+TA V+R I N + Sbjct: 5 ELTIAICTYNRSSFLTKTIQALFTLDNIEKAEIIIVDNNSTDNTAKEVRRLIGE--LNYE 62 Query: 71 IRYILEPVQGLSAARNTGILASKSPLIAFLDDDAIPCRNWITTIVSTFEQKPEVMAMGGK 130 ++YI E QGLS ARNT I AS+ IAFLDDDAIP W+ I+ TF+ ++ A+GG+ Sbjct: 63 VKYINEKRQGLSYARNTAIKASECEYIAFLDDDAIPNVKWLNIIIQTFKSNLDIYAIGGE 122 Query: 131 IAPIFESRRPDWLIKPFELPYTIVDLGNRVKEYPKRLHPCGANMAMRKVAFDISLFPLEL 190 I P FE +P+WL+K E YTI++LG + YP L+P GANMA RK A FP L Sbjct: 123 IIPDFEINKPEWLVKGLEHSYTIINLGTEKRRYPSGLYPFGANMAFRKDALMKYEFPNHL 182 Query: 191 GRKGDSLLSGEETWLFNQIESQGHSILYHPQMAVDHFVPANRLTEDWIMKRYYSQGISNA 250 GRKG L+SGEETW+FN+ + +G Y P M V+HF+P RL ++W++KR+Y QG++N Sbjct: 183 GRKGTILISGEETWIFNKFKEEGWDYYYIPGMVVNHFIPRERLQKEWVLKRFYYQGVTNT 242 Query: 251 MKSEGVKGNLLLLGKTAAKIMYIAGDSILSRSQGRKLLNKCRLESIRGTL 300 + L L+ K +K +YI + +++G KLLN CR + I+G++ Sbjct: 243 LMCTRKSDTLKLIFKICSKYIYINIKKMFLKNEGDKLLNDCRRKGIQGSI 292 >B7K6R8.1 B7K6R8_CYAP7 Glycosyl transferase family 2 Length = 312 Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 95/245 (38%), Positives = 138/245 (56%), Gaps = 10/245 (4%) Query: 12 ISIIICTYNRSAXXXXXXXXXXXXE-NLDQAEVIVVDNSSKDDTAAVVKRFIEAEGANMD 70 IS++ICT+NRS + L+ E+I++DN S D T VV++ A + Sbjct: 5 ISVVICTHNRSQYLAKAIQSLLNQQFPLENYEIIIIDNCSTDQTKEVVEQL-----AGKN 59 Query: 71 IRYILEPVQGLSAARNTGILASKSPLIAFLDDDAIPCRNWITTIVSTFEQ-KPEVMAMGG 129 +RYI EP GLS ARNTG ++ +A+LDDDAI C W++TI+ FE +P+ +GG Sbjct: 60 LRYIYEPTLGLSYARNTGWKNAQGKYVAYLDDDAIACPLWLSTILEVFETVQPQPGCVGG 119 Query: 130 KIAPIFESRRPDWLIKPFELPYTIVDLGNRVKEYP--KRLHPCGANMAMRKVAFD-ISLF 186 K PI+E+ RP+WL T++D + P R GAN+A K + + F Sbjct: 120 KAEPIWEAPRPNWLSDELVTGLTVIDWSPTPQVLPDLSRQWLVGANIAFPKAVLEKLGGF 179 Query: 187 PLELGRKGDSLLSGEETWLFNQIESQGHSILYHPQMAVDHFVPANRLTEDWIMKRYYSQG 246 L R G LLSG + +L QI G+S YHPQMAV H + +RL + W ++RY+ QG Sbjct: 180 IDGLDRSGKHLLSGGDVFLEKQIAQAGYSCYYHPQMAVSHHIQQSRLDKKWFIRRYFWQG 239 Query: 247 ISNAM 251 +S+A+ Sbjct: 240 VSDAV 244 >B8HT95.1 B8HT95_CYAP4 Glycosyl transferase family 2 Length = 310 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 96/245 (39%), Positives = 139/245 (56%), Gaps = 9/245 (3%) Query: 12 ISIIICTYNRSAXXXXXXXXXXXXENLDQA-EVIVVDNSSKDDTAAVVKRFIEAEGANMD 70 IS++ICTYNR++ Q+ E+I+VDN S D T V++F AN++ Sbjct: 5 ISVVICTYNRASYLAKAIQSLLEQSLEPQSYEIIIVDNGSTDTTKMTVEQF----SANIN 60 Query: 71 IRYILEPVQGLSAARNTGILASKSPLIAFLDDDAIPCRNWITTIVSTFEQK-PEVMAMGG 129 IRYI E QGL ARNTG +K +A+LDDDAI W+ I+ F+ +GG Sbjct: 61 IRYIYESNQGLCYARNTGWRKAKGKYVAYLDDDAIASPFWLNKIIEVFDSGIANPGCVGG 120 Query: 130 KIAPIFESRRPDWLIKPFELPYTIVDLGN--RVKEYPKRLHPCGANMAM-RKVAFDISLF 186 K+ PI+E+ RP WL TIVD + +V + GAN+A ++V ++ F Sbjct: 121 KVKPIWEAPRPQWLSDELLATLTIVDWSDAPQVISDLSQQWLVGANIAFPKEVLEELGGF 180 Query: 187 PLELGRKGDSLLSGEETWLFNQIESQGHSILYHPQMAVDHFVPANRLTEDWIMKRYYSQG 246 LGR G++LLSG++T+L QI G+S YHP++ V H + +RL++DW + RY QG Sbjct: 181 VAGLGRVGNNLLSGDDTFLEKQIIQAGYSCFYHPEIVVHHHIQLSRLSQDWFISRYLWQG 240 Query: 247 ISNAM 251 S+AM Sbjct: 241 RSDAM 245 >Q10X94.1 Q10X94_TRIEI Glycosyl transferase, family 2 Length = 311 Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 105/313 (33%), Positives = 162/313 (51%), Gaps = 28/313 (8%) Query: 10 PKISIIICTYNRSAXXXXXXXXXXXXENLDQA-EVIVVDNSSKDDTAAVVKRFIEAEGAN 68 P +S++ICT+NR+ +Q EV+++DN S+D+T + R+ E Sbjct: 12 PIVSVVICTHNRADRLILALEGLVKQSFPNQNFEVLIIDNVSEDNTKEIGDRYQENYS-- 69 Query: 69 MDIRYILEPVQGLSAARNTGILASKSPLIAFLDDDAIPCRNWITTIVSTFEQ-KPEVMAM 127 + RYI EPV GLS ARN G+ +K +A+LDDDAIPC W+ +I+ +F KP + + Sbjct: 70 -NFRYIYEPVLGLSRARNLGLSLAKGKYVAYLDDDAIPCEEWLESILDSFTTVKPSPVCV 128 Query: 128 GGKIAPIFESRRPDWLIKPFELPYTIVDLGNRVKEYPKRLHPCGANMAMRKVAF-DISLF 186 GG I ++E +PDW+ K E +T++D G++ K + P GANMA K + ++ F Sbjct: 129 GGPIYGLWEIPKPDWIDKTMEDFFTVLDYGSQPKWFKTNKFPYGANMAYTKESLKNVGGF 188 Query: 187 PLELGRKGDSLLSGEETWLFNQIESQGHSILYHPQMAVDHFVPANRLTEDWIMKRYYSQG 246 +LGR+G LLS EE L +E G Y+P+ +V H+VP R+ W++ R Y QG Sbjct: 189 NEKLGRQGKKLLSQEELLLNLTLEQFGGKFYYNPKASVQHWVPKERINAKWLLSRSYWQG 248 Query: 247 ISNAMKSEGVK-----------GNLLLLGKTAAKIMYIAGDSILSRSQGR-KLLNKCRLE 294 S+A+ + + NLL L + A+ Q R +L +CR+ Sbjct: 249 RSDAIADQIIGKSITREYLESLWNLLNLKRVIAQFW----------PQSRVRLTTRCRIW 298 Query: 295 SIRGTLHMIWNRK 307 G +W K Sbjct: 299 RSWGYFVQVWFNK 311 >B6IU33.1 B6IU33_RHOCS Glycosyl transferase, family 2, putative EC=2.4.1.- Length = 335 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 95/245 (38%), Positives = 133/245 (54%), Gaps = 8/245 (3%) Query: 10 PKISIIICTYNRSAXXXXXXXXXXXXENLDQA--EVIVVDNSSKDDTAAVVKRFIEAEGA 67 P+I+ I+CT+NR A + L A EV+VVDN S DDT V+ R I A + Sbjct: 16 PRIAAIVCTHNR-AWHLARALDSLRAQTLAPAAFEVVVVDNGSTDDTRDVIARGI-AGAS 73 Query: 68 NMDIRYILEPVQGLSAARNTGILASKSPLIAFLDDDAIPCRNWITTIVSTFEQKPEVMAM 127 NM R + EPV GLS ARNTG +++PLIA+LDDDA+ +W+ ++ F P + Sbjct: 74 NM--RSVFEPVLGLSRARNTGWRQAQAPLIAYLDDDAVAGPDWLERLLRAFAD-PRAGVV 130 Query: 128 GGKIAPIFESRRPDWLIKPFELPYTIVDLGNRVKEYPKRLHPCGANMAMRKVAFD-ISLF 186 GG+I +E RP WL + T++D G R GAN+A R+ + + F Sbjct: 131 GGRILGDWEVPRPAWLARQLLPSLTVIDWGERPFTVRPPCFVAGANIAFRREHLERLDGF 190 Query: 187 PLELGRKGDSLLSGEETWLFNQIESQGHSILYHPQMAVDHFVPANRLTEDWIMKRYYSQG 246 LGRKG LLS EE + +IE+ G Y P V H+V RLT+ W ++R + QG Sbjct: 191 SEHLGRKGGLLLSAEEREMTRRIEALGFETRYEPAACVRHWVGRERLTQAWFLERAHWQG 250 Query: 247 ISNAM 251 +S A+ Sbjct: 251 VSEAL 255 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.136 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,718,422,444 Number of extensions: 65366993 Number of successful extensions: 136167 Number of sequences better than 1.0e-05: 409 Number of HSP's gapped: 137318 Number of HSP's successfully gapped: 411 Length of query: 313 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 178 Effective length of database: 1,788,859,178 Effective search space: 318416933684 Effective search space used: 318416933684 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)