BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0035.p (380 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1MJF2.1 B1MJF2_MYCA9 Probable glycosyl transferase 165 8e-39 Q0S4L9.1 Q0S4L9_RHOSR Possible glycosyltransferase 154 2e-35 B5WGB2.1 B5WGB2_9BURK Glycosyl transferase group 1 149 5e-34 B7J9G0.1 B7J9G0_ACIF2 Glycosyl transferase, group 1 family protein 144 1e-32 C1ZT39.1 C1ZT39_RHOMR Glycosyltransferase 140 2e-31 >B1MJF2.1 B1MJF2_MYCA9 Probable glycosyl transferase Length = 394 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 116/391 (29%), Positives = 189/391 (48%), Gaps = 22/391 (5%) Query: 1 MLKVAYIDHTAKWSGGEVALFNILTNISNQ-----IEPLVIXXXXXXXXXXXXXKGIDVR 55 M++ ++ HTA SG E+A +L+ + N +EP V+ +GI Sbjct: 1 MIRATFVAHTAAPSGAELATLRLLSAVRNSSTGLILEPSVVYTEDGPMVNAMKSQGISTS 60 Query: 56 VIP--LDE-SIRNRGRNTVNXXXXXXXXXXXXXXXXXXXILKQEKVDCVHTNSLKSAFYG 112 V+ D S+ RG + +++ D + S K+ Sbjct: 61 VLANTFDSRSVTIRGSGWLRRLAGATSLVRVGWSLGAA--VREHGADVLVAGSTKALIMS 118 Query: 113 AVAAKKAGVPLIWHIRDHIGAPYLKPVVAKAIRLLSRLLPNGVIANSHSTLNALELPRTK 172 AVAAK+A +PLIWH+ D I A Y +A IR+L +L+ +G IANS ST ++L P Sbjct: 119 AVAAKRARIPLIWHVHDRISAEYFGAALAFLIRILGKLVADGYIANSRSTESSLR-PGRL 177 Query: 173 KTLVVYSAFAKAIGEGIGKREQQ--KDFNVLLVGRLAQWKGQHIVLEAAKAFKNDSRVK- 229 ++ Y + Q+ + + +VGRL QWKGQ + L +A N +RV+ Sbjct: 178 PGVIAYPGLDFQHTPAVEHAPQRPAAETVIAVVGRLTQWKGQDVFL---RALAN-TRVRP 233 Query: 230 --FWLAGDALFGEEAYKNELIQKIQQDELTNVSLLGHVDDIQGLMSKADLLIHTSITPEP 287 +L G FGEE+++ EL + + + V+ GH+DD ++S AD+L+H S+ EP Sbjct: 234 QRVYLVGGTFFGEESFRTEL-EDLASELQLPVTFTGHLDDPTDILSIADILVHCSVIAEP 292 Query: 288 FGQVIVEGMAAGLPVIASNXXXXXXXXXXXXXXLLIQPGDPVVLADSITWMLNHPEDRKR 347 FGQV+VEG+ AG VIA+ LL++ GD L D++ ++ + R R Sbjct: 293 FGQVVVEGLRAGCAVIATQPGGPAETIESGVHGLLVRAGDTGQLTDALDHLIEDRDLRIR 352 Query: 348 MADSGMKRVKEHFVIENTVKDIVDYYKGLLA 378 +A +G R + F I ++ + + + +LA Sbjct: 353 LAQAGRDRARR-FDIADSAQTVGTFLSDMLA 382 >Q0S4L9.1 Q0S4L9_RHOSR Possible glycosyltransferase Length = 393 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 144/273 (52%), Gaps = 12/273 (4%) Query: 104 NSLKSAFYGAVAAKKAGVPLIWHIRDHIGAPYLKPVVAKAIRLLSRLLPNGVIANSHSTL 163 S K+ GAVAA++AG+PL+W + D I A Y ++A +R L + G IANS ST+ Sbjct: 113 ESTKALVIGAVAARRAGIPLVWQVHDRISAEYFGGLLASVVRGLGWVFSRGYIANSRSTM 172 Query: 164 NALELPRTKKTLVVYSAFAKA-IGEGIGKREQQKDFNVLLVGRLAQWKGQHIVLEAAKAF 222 + L + TLV Y + + + + +R + V+ VGRL WKGQ + L A Sbjct: 173 STL-FAWHRATLVAYPGVEPSRLPDHVSQRRPSETV-VVAVGRLTPWKGQDVFLRALA-- 228 Query: 223 KNDSRVK---FWLAGDALFGEEAYKNELIQKIQQDELTNVSLLGHVDDIQGLMSKADLLI 279 D+ V+ +L G FGEEA++ E ++++ + V GHVD M AD+L+ Sbjct: 229 --DTTVRPQCVYLVGGTFFGEEAFR-ESLERLGHELDLPVIFTGHVDHPDAYMRHADILV 285 Query: 280 HTSITPEPFGQVIVEGMAAGLPVIASNXXXXXXXXXXXXXXLLIQPGDPVVLADSITWML 339 H S+ PEPFGQV+VEGM AG VIAS LL+ GD L ++ ++ Sbjct: 286 HCSVIPEPFGQVVVEGMNAGCAVIASGPGGPTEIVESGINGLLVDGGDQEQLTAALNTLI 345 Query: 340 NHPEDRKRMADSGMKRVKEHFVIENTVKDIVDY 372 E R+R++ +G +R +F I + +DI + Sbjct: 346 GDRELRRRLSAAGRRRAT-YFDIAESARDIASF 377 >B5WGB2.1 B5WGB2_9BURK Glycosyl transferase group 1 Length = 817 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 17/297 (5%) Query: 94 KQEKVDCVHTNSLKSAFYGAVAAKKAGVPLIWHIRDHIGAPYLKPVVAKAIRLLSRLLPN 153 + KVD ++ N+ ++ GA+A K A P++WH+RD + A + I+ +RL Sbjct: 521 RARKVDVIYANTQRAMVIGALAGKLARRPVVWHLRDIVSAEHFGGKQLAIIKWCARLGLT 580 Query: 154 GVIANSHSTLNAL-ELPR--TKKTLVVYSAFA-------KAIGEGIGKREQQKDFNVLLV 203 VIANS ++ +A +L R +K+ VV++ A + + + + + + LV Sbjct: 581 HVIANSAASAHAFAKLTRFDSKRIDVVFNGIAAEPFDALRTVPQAVLRERLNLPGDAFLV 640 Query: 204 G---RLAQWKGQHIVLEAAKAFKNDSRVKFWLAGDALFGEEAYKNELIQKIQQDEL-TNV 259 G RLA+WKGQH++LEA + ++ L G ALFGE+ Y++EL + +L + V Sbjct: 641 GSFSRLARWKGQHVLLEAMVL---NPQMHAVLVGAALFGEDQYESELRAFVAAHKLGSRV 697 Query: 260 SLLGHVDDIQGLMSKADLLIHTSITPEPFGQVIVEGMAAGLPVIASNXXXXXXXXXXXXX 319 LG DI M D ++HTSITPEPFG+VIVEGM A PV+AS Sbjct: 698 HFLGFQHDIAACMCAVDAVVHTSITPEPFGRVIVEGMLAQRPVVASRAGGVLEIIDDYEN 757 Query: 320 XLLIQPGDPVVLADSITWMLNHPEDRKRMADSGMKRVKEHFVIENTVKDIVDYYKGL 376 +L PGD LAD++ + ++ E R ++ +G + +E F + V+ + KG+ Sbjct: 758 GVLCTPGDAHALADTLAELRSNDELRNKLVTNGYRTAQERFGTRSYVEGVAQILKGV 814 >B7J9G0.1 B7J9G0_ACIF2 Glycosyl transferase, group 1 family protein Length = 413 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%) Query: 99 DCVHTNSLKSAFYGAVAAKKAGVPLIWHIRDHIGAPYLKPVVAKAIRLLSRLLPNGVIAN 158 D ++ NS K+ A+ A PLIWH+RD + A + P + + ++ + VI N Sbjct: 118 DVMYANSQKAMVVSALVCITARKPLIWHLRDILSAEHFSPTMRRVAVTVANARASAVIVN 177 Query: 159 SHSTLNALELP--RTKKTLVVYSAFAKAIGEGIGKREQ----------QKDFNVLLVGRL 206 SH+T A R K V+++ +GI E F + + GRL Sbjct: 178 SHATGEAFVAAGGRRKLVRVIHNGIDPKPFDGITAHEAVLARAELRPLDNSFLIGVFGRL 237 Query: 207 AQWKGQHIVLEAAKAFKNDSRVKFWLAGDALFGEEAYKNELIQKIQQDEL-TNVSLLGHV 265 A WKGQH+VLEA + V GDALFGE + + L ++ ++++L V LG Sbjct: 238 APWKGQHVVLEALCSLPGVCAV---FVGDALFGETDFVHVLHKRAEREDLRERVRFLGFR 294 Query: 266 DDIQGLMSKADLLIHTSITPEPFGQVIVEGMAAGLPVIASNXXXXXXXXXXXXXXLLIQP 325 +DI LM D+++H+S+ PEPFG+VIVEGM A PV+AS LL P Sbjct: 295 NDIPRLMRAVDVVVHSSVNPEPFGRVIVEGMLARRPVVASAAGGVLEIIEDGDTGLLYPP 354 Query: 326 GDPVVLADSITWMLNHPEDRKRMADSGMKRVKEHFVIENTVKDI 369 GD + L I + N P +R+ SG K+ +E+F I + + Sbjct: 355 GDGLALRAQIERLRNDPALCERLGASGYKKAQEYFSIPAMIDGV 398 >C1ZT39.1 C1ZT39_RHOMR Glycosyltransferase Length = 389 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 118/385 (30%), Positives = 179/385 (46%), Gaps = 29/385 (7%) Query: 2 LKVAYIDHTAKWSGGEVALFNILTNISNQIEPLVIXXXXXXXXXXXXXKGIDVRVIPLDE 61 L+ ++DH+A G E+ L ++ + E V+ GI VI E Sbjct: 7 LRTLFLDHSAALGGAELYLLDLAPAFAPPGE--VLLLEEGPFYEKLRAAGIPADVITAPE 64 Query: 62 SIRNRGRNTVNXXXXXXXXXXXXXXXXXXXILKQEKVDCVHTNSLKSAFYGAVAAKKAGV 121 ++R R K D ++ NS K+ G++AA+ A Sbjct: 65 AVRRVAREAGPFRALRAVPGLLRLAWRVAR--KARAFDLIYANSQKALVVGSLAAQMARR 122 Query: 122 PLIWHIRD-----HIGAPYLKPVVAKAIRLLSRLLPNGVIANSHSTLNA-LELPRTKKTL 175 PL+W++ D H A ++ V A R +RLL IANS ++ A LE + Sbjct: 123 PLVWNLHDVLTTEHFSAMNIRLAVTLANRF-ARLL----IANSEASKAAFLEAGGRVPVV 177 Query: 176 VVYSA-----FAKAIGEGIGKREQQ---KDFNVL-LVGRLAQWKGQHIVLEAAKAFKNDS 226 VV++ FA E + ++ +D V+ L RLA WKGQH++LEA Sbjct: 178 VVHNGIDVERFAAVDPEQVAALRRELGLRDGPVVGLFSRLAPWKGQHVLLEALAELPE-- 235 Query: 227 RVKFWLAGDALF-GEEAYKNELIQKIQQDELT-NVSLLGHVDDIQGLMSKADLLIHTSIT 284 V+ L G+ALF E+ Y +L ++ Q +L V LG DD+ LM D+++HTS+ Sbjct: 236 -VQAILVGEALFQDEQLYAEQLRKRAAQPDLEGRVHFLGFRDDVPMLMQLVDVVVHTSVA 294 Query: 285 PEPFGQVIVEGMAAGLPVIASNXXXXXXXXXXXXXXLLIQPGDPVVLADSITWMLNHPED 344 PEPFG+VIVEGM A PVIA+ LL+ PGD LA +I +L HP+ Sbjct: 295 PEPFGRVIVEGMLARRPVIATRGGGAVEIVRDGETGLLVPPGDAQALAAAIRHLLEHPDQ 354 Query: 345 RKRMADSGMKRVKEHFVIENTVKDI 369 +++A++G + + F IE K + Sbjct: 355 ARQLAEAGSQDARHRFSIEAMRKGV 379 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,932,305,642 Number of extensions: 68988530 Number of successful extensions: 174358 Number of sequences better than 1.0e-05: 700 Number of HSP's gapped: 175104 Number of HSP's successfully gapped: 700 Length of query: 380 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 243 Effective length of database: 1,770,017,148 Effective search space: 430114166964 Effective search space used: 430114166964 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)