BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0153.0029.p
         (88 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1ZZE2.1 B1ZZE2_OPITP PA14 domain protein                              78   3e-13
B9LJV1.1 B9LJV1_CHLSY PA14 domain protein                              71   3e-11
A9WFF0.1 A9WFF0_CHLAA PA14 domain protein                              71   3e-11
B9XNF1.1 B9XNF1_9BACT PA14 domain protein                              69   1e-10
Q3BME5.1 Q3BME5_XANC5 Beta-glucosidase EC=3.2.1.21                     67   5e-10

>B1ZZE2.1 B1ZZE2_OPITP PA14 domain protein
          Length = 14944

 Score = 77.8 bits (190), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 45/71 (63%)

Query: 9     GLQGEYFKNMTLSGTPVLVRNDAVVNFNWRQAAPVSSLGVDSFSIRWTGLIKPXXXXXXX 68
             GLQG+YF N ++SG PVLVR DAVV+F W  +AP + +  DSFS+RW G ++        
Sbjct: 12720 GLQGQYFNNTSVSGAPVLVRTDAVVDFGWGNSAPAAQVNADSFSVRWEGFVEAPVTGGYV 12779

Query: 69    XXXXXDDGIRV 79
                  DDGIR+
Sbjct: 12780 FSTVSDDGIRL 12790


>B9LJV1.1 B9LJV1_CHLSY PA14 domain protein
          Length = 1040

 Score = 70.9 bits (172), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 43/76 (56%)

Query: 11  QGEYFKNMTLSGTPVLVRNDAVVNFNWRQAAPVSSLGVDSFSIRWTGLIKPXXXXXXXXX 70
           +GEYF N +LSG+PVLVR D  +NFNW   AP   +  D+FS+RWT  ++          
Sbjct: 603 RGEYFNNTSLSGSPVLVRGDNTINFNWETGAPAPGVQADNFSVRWTKKVRVDRSGVYRFT 662

Query: 71  XXXDDGIRVXXXGLTV 86
              DDG+R+   G  V
Sbjct: 663 TASDDGLRIYVNGRLV 678


>A9WFF0.1 A9WFF0_CHLAA PA14 domain protein
          Length = 1040

 Score = 70.9 bits (172), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 43/76 (56%)

Query: 11  QGEYFKNMTLSGTPVLVRNDAVVNFNWRQAAPVSSLGVDSFSIRWTGLIKPXXXXXXXXX 70
           +GEYF N +LSG+PVLVR D  +NFNW   AP   +  D+FS+RWT  ++          
Sbjct: 603 RGEYFNNTSLSGSPVLVRGDNTINFNWETGAPAPGVQADNFSVRWTKKVRVDRSGVYRFT 662

Query: 71  XXXDDGIRVXXXGLTV 86
              DDG+R+   G  V
Sbjct: 663 TASDDGLRIYVNGRLV 678


>B9XNF1.1 B9XNF1_9BACT PA14 domain protein
          Length = 1170

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 9   GLQGEYFKNMT----LSGTPVLVRNDAVVNFNWRQAAPVSSLGVDSFSIRWTGLIKPXXX 64
           GLQGEYF N +     +G+P LVR D  +NF+W   +P   +  D F++RWTG+++P   
Sbjct: 426 GLQGEYFSNHSSTNAFAGSPTLVRTDPTINFDWNTGSPDPLISTDQFTVRWTGMVQPQFN 485

Query: 65  XXXXXXXXXDDGIRV 79
                    DDG+R+
Sbjct: 486 ETYTFYTRTDDGVRL 500


>Q3BME5.1 Q3BME5_XANC5 Beta-glucosidase EC=3.2.1.21
          Length = 902

 Score = 67.0 bits (162), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 16/98 (16%)

Query: 5   PTVN----GLQGEYFKNMTLSGTPVLVRNDAVVNFNWRQAAPVSSL------------GV 48
           P+ N    GL+GEYF+N  LSGTP LVR DA + F W + +P  +L              
Sbjct: 476 PSANSPERGLRGEYFRNRDLSGTPALVRVDAQIGFKWDRGSPTDNLLARGEAGPSEAVPA 535

Query: 49  DSFSIRWTGLIKPXXXXXXXXXXXXDDGIRVXXXGLTV 86
           D+FSIRW+G + P            DDG+R+   G  V
Sbjct: 536 DNFSIRWSGQLVPPTTGTYHLEAAADDGVRLYLDGKPV 573


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.320    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 416,696,638
Number of extensions: 13047009
Number of successful extensions: 22279
Number of sequences better than 1.0e-05: 54
Number of HSP's gapped: 22283
Number of HSP's successfully gapped: 60
Length of query: 88
Length of database: 3,060,696,203
Length adjustment: 58
Effective length of query: 30
Effective length of database: 2,514,277,333
Effective search space: 75428319990
Effective search space used: 75428319990
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)