BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0028.p (133 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B4W3S7.1 B4W3S7_9CYAN PA14 domain protein 154 2e-36 B9XL26.1 B9XL26_9BACT PA14 domain protein 147 4e-34 A3DC75.1 A3DC75_CLOTH PA14 144 3e-33 B4BHL3.1 B4BHL3_CLOTM PA14 domain protein 144 3e-33 C0UXH2.1 C0UXH2_9BACT PA14 domain-containing protein 141 2e-32 >B4W3S7.1 B4W3S7_9CYAN PA14 domain protein Length = 1384 Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 68/124 (54%), Positives = 92/124 (74%) Query: 8 AVVRTDAVLDFNWRLGSPDAAIPTDFFSVRWSGKIKPLYSETYQIYTTSDDGVRVWVNGT 67 A+ RTD +DFNW GSPDAAI + +SVRW+G + PL+SETY+ +T SDDGVR+WV+ Sbjct: 991 ALTRTDETVDFNWGSGSPDAAIDANTYSVRWTGSVAPLHSETYEFFTNSDDGVRLWVDDQ 1050 Query: 68 LVIDSWMKQSGTERTGSISLQAGQLYDIKVEYYENQGDARARLMWESPSQVKETVPASAL 127 L+ID+W TE +G+I LQAGQ YDI+++YYEN G + A+L+W S SQ KE +P S L Sbjct: 1051 LLIDNWTNHGATENSGTIDLQAGQQYDIRMDYYENFGKSVAQLLWSSESQSKEIIPESQL 1110 Query: 128 FLPS 131 + P+ Sbjct: 1111 YSPA 1114 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 66/126 (52%), Positives = 94/126 (74%) Query: 8 AVVRTDAVLDFNWRLGSPDAAIPTDFFSVRWSGKIKPLYSETYQIYTTSDDGVRVWVNGT 67 A+ RTD +DFNW GSPDAAI + +SVRW+G ++PL+SETYQ T+SDDGVR+WVN Sbjct: 1143 ALTRTDDTVDFNWGSGSPDAAIDPNTYSVRWTGFVEPLHSETYQFKTSSDDGVRLWVNDQ 1202 Query: 68 LVIDSWMKQSGTERTGSISLQAGQLYDIKVEYYENQGDARARLMWESPSQVKETVPASAL 127 L++D+W T+ G+I L+AGQ Y+I+++YYEN+G + A+L W SPSQ +E +P S L Sbjct: 1203 LLVDNWTDHGVTDNRGTIDLEAGQQYEIRMDYYENRGKSVAQLAWSSPSQSEEIIPKSQL 1262 Query: 128 FLPSAS 133 + ++S Sbjct: 1263 YAANSS 1268 >B9XL26.1 B9XL26_9BACT PA14 domain protein Length = 1809 Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 63/128 (49%), Positives = 91/128 (71%) Query: 1 MQLSGAPAVVRTDAVLDFNWRLGSPDAAIPTDFFSVRWSGKIKPLYSETYQIYTTSDDGV 60 M +G+P++VRTDA ++F W G+PD + +D F+ RW+G ++P +SE Y YTT+DDGV Sbjct: 1078 MTFNGSPSLVRTDATVNFLWNNGAPDPKVSSDHFTARWTGSVQPQFSENYTFYTTTDDGV 1137 Query: 61 RVWVNGTLVIDSWMKQSGTERTGSISLQAGQLYDIKVEYYENQGDARARLMWESPSQVKE 120 R+WVNG L+ID W+ Q TE +G I+L A Q Y+I+++YYEN G A+A L W SPS K Sbjct: 1138 RLWVNGQLLIDHWVDQGATEWSGLITLAAQQKYNIQMDYYENGGGAQASLSWSSPSTAKT 1197 Query: 121 TVPASALF 128 +P + L+ Sbjct: 1198 IIPQTQLY 1205 >A3DC75.1 A3DC75_CLOTH PA14 Length = 644 Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 65/119 (54%), Positives = 87/119 (73%) Query: 10 VRTDAVLDFNWRLGSPDAAIPTDFFSVRWSGKIKPLYSETYQIYTTSDDGVRVWVNGTLV 69 VR D +DF+W G+PD +I D +SVRW+GK++P YSETY YT +DDGVR+WV+G L+ Sbjct: 375 VRIDPCIDFDWGEGTPDQSIGKDTYSVRWTGKVEPRYSETYTFYTVTDDGVRLWVDGVLL 434 Query: 70 IDSWMKQSGTERTGSISLQAGQLYDIKVEYYENQGDARARLMWESPSQVKETVPASALF 128 ID W QS TE + I L+AG+ YDIK+EYY++ A A+LMW S SQ KE +P+S L+ Sbjct: 435 IDKWKSQSATEHSEQIYLEAGKKYDIKMEYYQHVRAASAKLMWSSKSQQKEIIPSSQLY 493 Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 53/119 (44%), Positives = 69/119 (57%), Gaps = 1/119 (0%) Query: 11 RTDAVLDFNWRLGSPDAAIPTDFFSVRWSGKIKPLYSETYQIYTTSDDGVRVWVNGTLVI 70 R D ++FNW P + FSVRW GKI Y+E Y +T ++ GVRVW+N L+I Sbjct: 524 RIDDAINFNWDKDFPVGELKDGKFSVRWVGKIDTRYTEEYTFHTVANGGVRVWINNVLII 583 Query: 71 DSWMKQSG-TERTGSISLQAGQLYDIKVEYYENQGDARARLMWESPSQVKETVPASALF 128 D+W Q E +G I L+AG+ YDIKVEY A +L+W S Q KE VP+ LF Sbjct: 584 DNWQNQGKEAENSGKIELKAGRQYDIKVEYCNYGEPAFIKLLWSSQRQKKEVVPSKNLF 642 >B4BHL3.1 B4BHL3_CLOTM PA14 domain protein Length = 644 Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 65/119 (54%), Positives = 87/119 (73%) Query: 10 VRTDAVLDFNWRLGSPDAAIPTDFFSVRWSGKIKPLYSETYQIYTTSDDGVRVWVNGTLV 69 VR D +DF+W G+PD +I D +SVRW+GK++P YSETY YT +DDGVR+WV+G L+ Sbjct: 375 VRIDPCIDFDWGEGTPDQSIGKDTYSVRWTGKVEPRYSETYTFYTVTDDGVRLWVDGVLL 434 Query: 70 IDSWMKQSGTERTGSISLQAGQLYDIKVEYYENQGDARARLMWESPSQVKETVPASALF 128 ID W QS TE + I L+AG+ YDIK+EYY++ A A+LMW S SQ KE +P+S L+ Sbjct: 435 IDKWKSQSATEHSEQIYLEAGKKYDIKMEYYQHVRAASAKLMWSSKSQQKEIIPSSQLY 493 Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 53/119 (44%), Positives = 69/119 (57%), Gaps = 1/119 (0%) Query: 11 RTDAVLDFNWRLGSPDAAIPTDFFSVRWSGKIKPLYSETYQIYTTSDDGVRVWVNGTLVI 70 R D ++FNW P + FSVRW GKI Y+E Y +T ++ GVRVW+N L+I Sbjct: 524 RIDDAINFNWDKDFPVGELKDGKFSVRWVGKIDTRYTEEYTFHTVANGGVRVWINNVLII 583 Query: 71 DSWMKQSG-TERTGSISLQAGQLYDIKVEYYENQGDARARLMWESPSQVKETVPASALF 128 D+W Q E +G I L+AG+ YDIKVEY A +L+W S Q KE VP+ LF Sbjct: 584 DNWQNQGKEAENSGKIELKAGRQYDIKVEYCNYGEPAFIKLLWSSQRQKKEVVPSKNLF 642 >C0UXH2.1 C0UXH2_9BACT PA14 domain-containing protein Length = 613 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/120 (55%), Positives = 85/120 (70%) Query: 9 VVRTDAVLDFNWRLGSPDAAIPTDFFSVRWSGKIKPLYSETYQIYTTSDDGVRVWVNGTL 68 V R D +DF+W G PD +IP FS RW GKI+P YSE Y YTT+DDGVR+WVNG L Sbjct: 52 VTRIDPNIDFDWSSGPPDPSIPPYDFSARWYGKIEPKYSEMYTFYTTTDDGVRLWVNGQL 111 Query: 69 VIDSWMKQSGTERTGSISLQAGQLYDIKVEYYENQGDARARLMWESPSQVKETVPASALF 128 +ID W+ Q+ TE + SI LQAGQ YD+ +EYY+ G A A+L W SPSQ +E +P+ +L+ Sbjct: 112 LIDKWVDQAPTEWSASIQLQAGQKYDLIMEYYQAGGGAMAKLEWSSPSQPREVIPSDSLY 171 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.130 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 880,048,012 Number of extensions: 35412324 Number of successful extensions: 65450 Number of sequences better than 1.0e-05: 147 Number of HSP's gapped: 65422 Number of HSP's successfully gapped: 178 Length of query: 133 Length of database: 3,060,696,203 Length adjustment: 98 Effective length of query: 35 Effective length of database: 2,137,436,733 Effective search space: 74810285655 Effective search space used: 74810285655 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 125 (52.8 bits)