BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0025.p (915 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9XHK7.1 B9XHK7_9BACT Coagulation factor 5/8 type domain protein 156 1e-35 B9XAT4.1 B9XAT4_9BACT Carbohydrate binding family 6 143 9e-32 B9XP13.1 B9XP13_9BACT Coagulation factor 5/8 type domain protein 122 2e-25 Q08NM1.1 Q08NM1_STIAU Putative secreted protein (Fragment) 111 3e-22 Q21DX9.1 Q21DX9_SACD2 Putative carbohydrate-binding protein 105 2e-20 >B9XHK7.1 B9XHK7_9BACT Coagulation factor 5/8 type domain protein Length = 1290 Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/245 (40%), Positives = 132/245 (53%), Gaps = 9/245 (3%) Query: 675 FNET-LAPGEAVQYILEPSSEVADVAPQGLKAAAVKGPSVKLNWLEAPGA-SYEVLRADG 732 FN T +PG + ++ VAP GL A A + L+W+ + GA SY V RA Sbjct: 881 FNGTGESPGSTEISLTPTATGTPPVAPTGLTAIA-GNTQITLSWIASFGATSYNVKRAIA 939 Query: 733 SGSDLKVIATGIKQTEYTDGKLQEGTLYTY---AVRTAGSSVVSEKTQITATGLVPLDRS 789 G ++ATG+ T YTD L YTY AV AG S+ + A + L R+ Sbjct: 940 YGGPFTIVATGVTATNYTDVGLAPDNAYTYVVSAVNAAGESLTDSASASAAPTGILLGRT 999 Query: 790 EWKVSSNVNTQASNPANAIDGDRRTRWDTGKHQASGEYIQIDLGGVHSVEAIDLDYTLSS 849 W S++VN+ N AIDG+ TRWDT Q G++ Q+D+G V S + LD T S Sbjct: 1000 GWVASASVNS--GNAGRAIDGNISTRWDTSGAQTPGQWFQVDMGSVKSFYKLILDATPSL 1057 Query: 850 YDYPRGYELYISDDARSW-NKIASGKGKLEMTKIVFPAVKTRYLRILQTGSGGNYWSIQE 908 DYPRGY++ +S+D +W N +A+G +T I F RY+RI QTGS GNYWSI E Sbjct: 1058 NDYPRGYQVNVSNDGVNWGNPVATGVASSAVTTIKFATQTARYIRITQTGSVGNYWSIHE 1117 Query: 909 MQVYS 913 VY+ Sbjct: 1118 FNVYA 1122 >B9XAT4.1 B9XAT4_9BACT Carbohydrate binding family 6 Length = 1282 Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 96/265 (36%), Positives = 135/265 (50%), Gaps = 22/265 (8%) Query: 652 GNGDTYEE-ARSYVSGKSAAPTLEFNETLAPGEAVQYILEPSSEVADVAPQGLKAAAVKG 710 GNG T A+S G S + T+ F + PG AP GL A A Sbjct: 870 GNGGTNALIAQSTTIGTSESFTVGFVSGVPPG----------------APLGLMATA-GN 912 Query: 711 PSVKLNWLEAPGAS-YEVLRADGSGSDLKVIATGIKQTEYTDGKLQEGTLYTYAVRTAGS 769 V L+W + GA+ Y + R+ SG ++AT + YT+ L GT Y + V + S Sbjct: 913 FQVALSWAASVGATIYNIKRSLTSGGPYTIVATNVTDLAYTNTSLANGTTYFFVVSSQNS 972 Query: 770 SVVSEKTQITATGLVPLDRSEWKVSSNVNTQASNPANAIDGDRRTRWDTGKHQASGEYIQ 829 + S + LDR+ W V+SN + + PANAID D TRW TG Q +G++ Q Sbjct: 973 AGESANSSPIIATPGTLDRTGWVVASNT-SGSDAPANAIDLDLNTRWSTGASQTAGQWFQ 1031 Query: 830 IDLGGVHSVEAIDLDYTLSSYDYPRGYELYISDDARSWNK-IASGKGKLEMTKIVFPAVK 888 +D+G + I L+ SS DYPRGY++ +S+D +W +A+G G +T I F Sbjct: 1032 VDMGSARTFYKIVLNTVNSSGDYPRGYQVNVSNDGLAWGSPVATGTGASAITTITFATQA 1091 Query: 889 TRYLRILQTGSG-GNYWSIQEMQVY 912 RY+RI QTGS G+YWSI + VY Sbjct: 1092 ARYIRITQTGSAQGSYWSIHDFNVY 1116 >B9XP13.1 B9XP13_9BACT Coagulation factor 5/8 type domain protein Length = 1145 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 118/245 (48%), Gaps = 16/245 (6%) Query: 674 EFNETLAPGEAVQYILEPSSEVADVAPQGLKAAAVKGPSVKLNWLEAPGA-SYEVLRADG 732 E ++A G A Q + P+ P GL + V L W A Y V +A Sbjct: 748 EGGNSVAAGAATQALPVPAP------PVGLNIVSSSNGQVVLTWNGCGWADGYNVKQATN 801 Query: 733 SGSDLKVIATGIKQTEYTDGKLQEGTLYTYAV---RTAGSSVVSEKTQITATGLVPLDRS 789 SG +I + +T+ L G Y + V TAG S S + +T L L+R+ Sbjct: 802 SGGPYTIIGANVPGVLFTNSNLAIGATYYFVVSSTNTAGESANSSEASVT---LGKLNRA 858 Query: 790 EWKVSSNVNTQASNPANAIDGDRRTRWDTGKHQASGEYIQIDLGGVHSVEAIDLDYTLSS 849 W +++ + P NAIDGD TRW TG Q G++ Q+D+G + I +D S Sbjct: 859 GWGAAASSSNVIDPPTNAIDGDIGTRWSTGAVQTPGQWFQVDMGTTNICNTIVMDCGSSL 918 Query: 850 YDYPRGYELYISDDARSWNK-IASGKGKLEMTKIVFPAVKTRYLRILQTGSG-GNYWSIQ 907 DYPRGY++ +S D W+ +A+G G M ++ F A R++R+ QTGS N+WSI Sbjct: 919 NDYPRGYQVVVSLDGTHWSSVVATGAGSAVM-RVTFTAQPARFIRVTQTGSASANWWSIA 977 Query: 908 EMQVY 912 E Y Sbjct: 978 EFNAY 982 >Q08NM1.1 Q08NM1_STIAU Putative secreted protein (Fragment) Length = 1004 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 76/231 (32%), Positives = 119/231 (51%), Gaps = 23/231 (9%) Query: 696 ADVAPQGLKAAAVKGPSVKLNWLEAP---GAS-YEVLRADGSGSDLKVIATGIKQTEYTD 751 A P GL A AV + L+W + G S Y++ R G L V ++G +++ Sbjct: 782 APSTPAGLTATAVSSSQINLSWTASTDNVGVSGYDIYR----GGAL-VASSGTN--SFSN 834 Query: 752 GKLQEGTLYTYAVR--------TAGSSVVSEKTQITATGLVPLDRSEWKVSSNVNTQASN 803 L T+Y+Y VR +A S+ S TQ + PL R+ W +S+ + Sbjct: 835 TGLSPSTVYSYTVRAKDAAGNVSAASNTASATTQPGGSTGSPLARTGWTATSS--PTSGE 892 Query: 804 PANAI-DGDRRTRWDTGKHQASGEYIQIDLGGVHSVEAIDLDYTLSSYDYPRGYELYISD 862 PA+A+ DG+ TRW TG A+G+ + +D+ + I LD T S DY RGY++++S Sbjct: 893 PASALLDGNMATRWTTGVPMAAGQTLTVDMAASRTFNKIVLDATGSDLDYARGYQIHVST 952 Query: 863 DARSW-NKIASGKGKLEMTKIVFPAVKTRYLRILQTGSGGNYWSIQEMQVY 912 D +W + IA+G G + + F A RY+R+ QTG+ ++WS +E VY Sbjct: 953 DGTNWGSAIATGTGTGPVITVTFTARSARYIRVTQTGTNSSWWSAREFNVY 1003 >Q21DX9.1 Q21DX9_SACD2 Putative carbohydrate-binding protein Length = 557 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/129 (42%), Positives = 82/129 (63%), Gaps = 4/129 (3%) Query: 786 LDRSEWKVSSNVNTQASNPANAIDGDRRTRWDTGKHQASGEYIQIDLGGVHSVEAIDLDY 845 LDRS+W VS++VN + AID TRWDT + Q +G+ ++DLG ++++ AI+LD Sbjct: 287 LDRSDWTVSASVN--GAEAEFAIDSSPNTRWDTAQSQRAGQSFEVDLGELNTLAAIELDS 344 Query: 846 TLSSYDYPRGYELYISDDARSW-NKIASGKGKLEMTKIVFPAVKTRYLRILQTGSGGNY- 903 S+ DYPRGY +Y+S+D +W + IASG T I F V R+++I QTG G+Y Sbjct: 345 AGSANDYPRGYAVYVSNDGSNWGSAIASGAAVSASTTIEFTPVSARFVKIEQTGGDGHYW 404 Query: 904 WSIQEMQVY 912 WSI + ++ Sbjct: 405 WSIHNLNIF 413 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 5/133 (3%) Query: 786 LDRSEWKVSSNVNTQASNPANAIDGDRRTRWDTGKHQASGEYIQIDLGGVHSVEAIDLDY 845 LD + W +++N A+ NAID ++ TRW TG+ Q G+ +IDL V + I LD Sbjct: 427 LDSTPWSLAANRRNSAA--GNAIDNNQSTRWTTGQTQRDGQTFEIDLSTVQTFSRIVLDS 484 Query: 846 TLSSYDYPRGYELYISDDARSW-NKIASGKGKLE-MTKIVFPAVKTRYLRILQTGS-GGN 902 S D+PR YELY+S+D +W + +A+G G +T I FP+V RY+ I Q GS + Sbjct: 485 AASDDDHPRNYELYVSNDGSNWGSPVATGAGDSSGVTVIDFPSVTARYVLIAQAGSDSSH 544 Query: 903 YWSIQEMQVYSRE 915 +WSI E+ +Y+ + Sbjct: 545 WWSIHELSIYNVQ 557 Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 8/156 (5%) Query: 764 VRTAGSSVVSEKTQITAT-GLVP---LDRSEWKVSSNVNTQASNPANAIDGDRRTRWDTG 819 + +AG V+ K + + G P L+R W+VS++ + ++ A +DG TRW TG Sbjct: 121 IGSAGCDVIGPKWDLVSVYGPWPDGGLNRDAWEVSASNGSGSAQLA--LDGLASTRWATG 178 Query: 820 KHQASGEYIQIDLGGVHSVEAIDLDYTLSSYDYPRGYELYISDDARSWN-KIASGKGKLE 878 Q+ G+Y ID + ++I L T + DYPR YE+YIS + W + +G G Sbjct: 179 VFQSPGQYFDIDFQDALTFDSIVLATTENPEDYPRAYEVYISSNGSDWGVPVVTGAGNGS 238 Query: 879 MTKIVFPAVKTRYLRILQTGSGGN-YWSIQEMQVYS 913 T I V TRYLRILQTGS N +WSI E +++ Sbjct: 239 TTTIELDTVTTRYLRILQTGSSSNRWWSIHEFNIFN 274 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.131 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 5,566,857,932 Number of extensions: 240895206 Number of successful extensions: 448999 Number of sequences better than 1.0e-05: 57 Number of HSP's gapped: 449124 Number of HSP's successfully gapped: 65 Length of query: 915 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 770 Effective length of database: 1,694,649,028 Effective search space: 1304879751560 Effective search space used: 1304879751560 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 136 (57.0 bits)