BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0023.p (151 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K9W5.1 B3K9W5_9BACI Ferritin Dps family protein 194 3e-48 Q9KE40.1 Q9KE40_BACHD Stress-and starvation-induced gene control... 186 4e-46 B7GK29.1 B7GK29_ANOFW DNA-binding ferritin-like protein (Oxidati... 181 1e-44 C5D6T7.1 C5D6T7_9BACI Ferritin Dps family protein 181 2e-44 A4IS01.1 A4IS01_GEOTN DNA-protecting protein 179 6e-44 >B3K9W5.1 B3K9W5_9BACI Ferritin Dps family protein Length = 157 Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 90/142 (63%), Positives = 109/142 (76%) Query: 10 ELHTALNRQTANWTLLGVKLHHYHWYVSGPQFFTLHAKFEELYTEAATYVDDLAERLLAI 69 EL LN Q ANW++LGVKLHHYHWYV GPQF+ LH KFEELY AA YVD+LAER+LAI Sbjct: 15 ELQQILNTQVANWSVLGVKLHHYHWYVKGPQFYVLHEKFEELYNTAAGYVDELAERMLAI 74 Query: 70 GGQPASTMTQYLALSDLKEATGGETAQEMVAQLVKDFAVVSGELKSTISAAEELGDQPTA 129 GG+PA++M QYL L+ L+E + TA++MV QLV DF V+GELKS I AA + GD TA Sbjct: 75 GGKPAASMAQYLKLTTLQEVSNENTAEQMVGQLVADFEKVAGELKSGIEAANQEGDDATA 134 Query: 130 DLLIGIRTSVEKSAWMLNAFLA 151 DLL G+ + V+K +WMLNAFL Sbjct: 135 DLLTGMVSDVQKHSWMLNAFLG 156 >Q9KE40.1 Q9KE40_BACHD Stress-and starvation-induced gene controlled by sigma-B Length = 146 Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 86/144 (59%), Positives = 112/144 (77%) Query: 7 SHTELHTALNRQTANWTLLGVKLHHYHWYVSGPQFFTLHAKFEELYTEAATYVDDLAERL 66 SH ++ + LN+Q ANW++L VKLH+YHW+V GPQFFTLH KFEELY EAAT++D+LAERL Sbjct: 2 SHEKVASILNKQIANWSVLFVKLHNYHWFVKGPQFFTLHEKFEELYNEAATHIDELAERL 61 Query: 67 LAIGGQPASTMTQYLALSDLKEATGGETAQEMVAQLVKDFAVVSGELKSTISAAEELGDQ 126 LA+ GQPA+TM +YL +S + EA G ETA EMVA++ KDF + ELK + AA+ LGD+ Sbjct: 62 LALRGQPAATMREYLEISSVTEARGEETADEMVAEISKDFDTLIDELKEGMEAADSLGDE 121 Query: 127 PTADLLIGIRTSVEKSAWMLNAFL 150 TAD+L+ I S+EK WML +FL Sbjct: 122 TTADMLLAIHQSLEKHNWMLRSFL 145 >B7GK29.1 B7GK29_ANOFW DNA-binding ferritin-like protein (Oxidative damage protectant) Length = 145 Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 81/137 (59%), Positives = 107/137 (78%) Query: 15 LNRQTANWTLLGVKLHHYHWYVSGPQFFTLHAKFEELYTEAATYVDDLAERLLAIGGQPA 74 +N+Q ANW +L VKLH+YHWYV GPQFFTLH KFEELY EAA ++D+LAERLLA+GG+P Sbjct: 9 VNKQIANWNVLYVKLHNYHWYVKGPQFFTLHTKFEELYNEAALHIDELAERLLALGGKPL 68 Query: 75 STMTQYLALSDLKEATGGETAQEMVAQLVKDFAVVSGELKSTISAAEELGDQPTADLLIG 134 +TM YLA++ + EA G ETA+EMVA++V+DF + ELK+ + A E+GD+ T D+L+G Sbjct: 69 ATMKDYLAVASVHEAKGNETAEEMVAEIVRDFETMIEELKAGMDYAGEIGDETTGDMLLG 128 Query: 135 IRTSVEKSAWMLNAFLA 151 I S+EK WML +FL Sbjct: 129 IHQSLEKHVWMLKSFLG 145 >C5D6T7.1 C5D6T7_9BACI Ferritin Dps family protein Length = 146 Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 82/141 (58%), Positives = 108/141 (76%) Query: 10 ELHTALNRQTANWTLLGVKLHHYHWYVSGPQFFTLHAKFEELYTEAATYVDDLAERLLAI 69 +L +N+Q ANW++L +KLH+YHWYV GPQFFTLH KFE+LY EAA ++D+LAERLLA+ Sbjct: 4 QLTDIVNKQIANWSVLYIKLHNYHWYVKGPQFFTLHEKFEQLYNEAALHIDELAERLLAL 63 Query: 70 GGQPASTMTQYLALSDLKEATGGETAQEMVAQLVKDFAVVSGELKSTISAAEELGDQPTA 129 GG P +TM + L S +KEATG ETA++MVA +V DF + GELK + AEE+GD+ T Sbjct: 64 GGAPVATMKECLEQSSVKEATGQETAEQMVATIVSDFETMIGELKEGMQVAEEVGDEITG 123 Query: 130 DLLIGIRTSVEKSAWMLNAFL 150 D+L+GI S+EK WML +FL Sbjct: 124 DMLLGIHQSLEKHVWMLKSFL 144 >A4IS01.1 A4IS01_GEOTN DNA-protecting protein Length = 148 Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 83/143 (58%), Positives = 108/143 (75%) Query: 9 TELHTALNRQTANWTLLGVKLHHYHWYVSGPQFFTLHAKFEELYTEAATYVDDLAERLLA 68 +L +N+Q ANWT+L VKLH+YHWYV+GPQFFTLH KFEELY EAA ++D LAERLLA Sbjct: 5 NQLTDIVNKQIANWTVLYVKLHNYHWYVTGPQFFTLHEKFEELYNEAAGHIDALAERLLA 64 Query: 69 IGGQPASTMTQYLALSDLKEATGGETAQEMVAQLVKDFAVVSGELKSTISAAEELGDQPT 128 +GG+P +TM L + +KEATG ETA++MVA +V DF + GELK + A+E+GD+ T Sbjct: 65 LGGKPVATMKGALEQASVKEATGTETAEQMVASIVGDFETMIGELKEGMQVADEVGDETT 124 Query: 129 ADLLIGIRTSVEKSAWMLNAFLA 151 D+L+GI S+EK WML +FL Sbjct: 125 GDMLLGIHRSLEKHVWMLKSFLG 147 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.128 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 864,332,026 Number of extensions: 30939339 Number of successful extensions: 94885 Number of sequences better than 1.0e-05: 1163 Number of HSP's gapped: 94426 Number of HSP's successfully gapped: 1163 Length of query: 151 Length of database: 3,060,696,203 Length adjustment: 113 Effective length of query: 38 Effective length of database: 1,996,121,508 Effective search space: 75852617304 Effective search space used: 75852617304 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 125 (52.8 bits)