BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0153.0021.p
         (155 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K9X2.1 B3K9X2_9BACI Putative uncharacterized protein                 89   1e-16

>B3K9X2.1 B3K9X2_9BACI Putative uncharacterized protein
          Length = 150

 Score = 89.0 bits (219), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 26  FPASA--AKANYFSDLYNGLQNFSELPGEVNQLQESYRXXXXXXXXXXXXXXXXXXXMAD 83
            PA    A ANYF+++Y+ +Q F+ LP E+NQL+ +Y                       
Sbjct: 23  LPAGGRTASANYFNNMYDNIQQFTGLPDEINQLKSNYNQALQELDKAKIASERLQQQNLT 82

Query: 84  YQAQNAALQEQNRQLSQVVDELKNDRTARENYYNRIKITVITGLALILGYFVLIRLLRLG 143
              QN+ L EQN+QL+Q+V +L+    AR+    R+K   IT +AL  GYFV+IR+LR G
Sbjct: 83  LAEQNSNLAEQNQQLTQMVSQLQEAEAARKRGAERLKTVAITAVALAAGYFVIIRVLRFG 142

Query: 144 MRHRSR 149
           MR  +R
Sbjct: 143 MRRTNR 148


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.320    0.134    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 636,670,929
Number of extensions: 17043728
Number of successful extensions: 59361
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 59360
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 3,060,696,203
Length adjustment: 116
Effective length of query: 39
Effective length of database: 1,967,858,463
Effective search space: 76746480057
Effective search space used: 76746480057
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)