BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0016.p (337 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZB26.1 C0ZB26_BREBN ABC transporter ATP-binding protein 455 e-126 Q2B341.1 Q2B341_9BACI Oligopeptide ABC transporter ATP-binding p... 446 e-123 B7GIJ4.1 B7GIJ4_ANOFW ABC-type oligopeptide transport system, AT... 445 e-123 A4IKK5.1 A4IKK5_GEOTN Oligopeptide ABC transporter ATP-binding p... 444 e-123 B4BRM5.1 B4BRM5_9BACI Oligopeptide/dipeptide ABC transporter, AT... 444 e-123 >C0ZB26.1 C0ZB26_BREBN ABC transporter ATP-binding protein Length = 323 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 212/321 (66%), Positives = 255/321 (79%) Query: 1 MNDNLLEVRNLKKYYPVNKGFFNKTQAYIKAVDDISFSVRKGETFGLVGESGCGKSTTGR 60 M ++LL V+NLKKYYP+ G +KAVDD+SF+V+ GET GLVGESGCGKSTTGR Sbjct: 1 MAEDLLVVKNLKKYYPITGGVLGGEVGVVKAVDDVSFTVKSGETLGLVGESGCGKSTTGR 60 Query: 61 SLLRLIEPTAGEVWFEGRDITKLSXXXXXXXXXXXXIVFQDPFSSLDPRNTVQRILEEPM 120 SLLRLIEPT+GE+ F+G D+ LS IVFQDPF+SL+PR+ +++ILEEP+ Sbjct: 61 SLLRLIEPTSGEINFDGTDVMSLSTDAMRKMRRDMQIVFQDPFASLNPRHNIEKILEEPL 120 Query: 121 IVHGAGNAKERRAAVERLADVVGLAKAHLQRYPHQFSGGQRQRIGIARALALQPKLIIAD 180 IVHG G++ ER+ V+ + ++VGL+ H RYPHQFSGGQRQRIGIARAL L+PKLI+AD Sbjct: 121 IVHGLGSSAERKKRVQEMLEIVGLSSYHASRYPHQFSGGQRQRIGIARALMLKPKLIVAD 180 Query: 181 EPVSALDVSIQSQVINLMQDLQKEFGLTYIFIAHDLSVVKHICDRVAVMYLGRIVEITGK 240 EPVSALDVSIQSQV+NLMQDLQ+EFGLTY+FIAHDLSVV+HI DRV VMYLGRIVE+T Sbjct: 181 EPVSALDVSIQSQVLNLMQDLQREFGLTYLFIAHDLSVVRHISDRVGVMYLGRIVELTTS 240 Query: 241 NKLYDQPQHPYTQALLSAVPEPDPDIRKERVILQGEVPSPANAPVGCAFNTRCPRVMDVC 300 ++LY P HPYT+ALLSAVP PDPD +ERVILQG+VPSPA P GC F+TRCP V + C Sbjct: 241 SQLYSNPLHPYTRALLSAVPSPDPDAVRERVILQGDVPSPAKPPSGCTFHTRCPHVTEEC 300 Query: 301 RSTRPPLLETGAGHLTACHLY 321 R+ RP +TG GH ACHLY Sbjct: 301 RTVRPEFADTGDGHFVACHLY 321 >Q2B341.1 Q2B341_9BACI Oligopeptide ABC transporter ATP-binding protein Length = 336 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 211/328 (64%), Positives = 253/328 (77%), Gaps = 1/328 (0%) Query: 1 MNDNLLEVRNLKKYYPVNKGFFNKTQAYIKAVDDISFSVRKGETFGLVGESGCGKSTTGR 60 M + LLEV LKKY+P+ G F K +KAVDD+SF V KGET G+VGESGCGKSTTGR Sbjct: 9 MTEVLLEVNQLKKYFPITGGLFGKKTGDVKAVDDVSFYVNKGETLGIVGESGCGKSTTGR 68 Query: 61 SLLRLIEPTAGEVWFEGRDITKLSXXXXXXXXXXXXIVFQDPFSSLDPRNTVQRILEEPM 120 L+RLIEPT G+V FEG+++T L+ +VFQDPF+SL+PR+TV++ILEEP+ Sbjct: 69 MLMRLIEPTEGKVLFEGKELTGLNDSEMRKMRKEMQMVFQDPFASLNPRHTVEKILEEPL 128 Query: 121 IVHGAGNAKERRAAVERLADVVGLAKAHLQRYPHQFSGGQRQRIGIARALALQPKLIIAD 180 IVHG G+ KER+ V+ + +VVGL+ H +RYPHQFSGGQRQRIGIARAL +PKLIIAD Sbjct: 129 IVHGMGDKKERKQKVKEMLEVVGLSSWHAKRYPHQFSGGQRQRIGIARALMTRPKLIIAD 188 Query: 181 EPVSALDVSIQSQVINLMQDLQKEFGLTYIFIAHDLSVVKHICDRVAVMYLGRIVEITGK 240 EPVSALDVSIQSQV+NL++DLQKEF LTYIFIAHDL VV+HI DRV VMYLGR+VEIT Sbjct: 189 EPVSALDVSIQSQVLNLLEDLQKEFQLTYIFIAHDLGVVRHISDRVGVMYLGRLVEITTA 248 Query: 241 NKLYDQPQHPYTQALLSAVPEPDPDIRKERVILQGEVPSPANAPVGCAFNTRCPRVMDVC 300 KLY++P HPYT ALL AVP PDPD+RKE +L G++PSPAN P GCAF+TRC M +C Sbjct: 249 EKLYEKPLHPYTSALLGAVPVPDPDLRKEAELLSGDIPSPANPPKGCAFHTRCRECMAIC 308 Query: 301 RSTRPPLLETGAGHLTACHLYDGEDRIH 328 RP L E GH ACHLY +R+H Sbjct: 309 TVERPQLEEIEEGHFAACHLYTS-NRVH 335 >B7GIJ4.1 B7GIJ4_ANOFW ABC-type oligopeptide transport system, ATPase component Length = 330 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 205/321 (63%), Positives = 252/321 (78%) Query: 1 MNDNLLEVRNLKKYYPVNKGFFNKTQAYIKAVDDISFSVRKGETFGLVGESGCGKSTTGR 60 MN+ LL+V+ LKKY+P+ G FNK +KAVDD+SFSV KGET G+VGESGCGKSTTGR Sbjct: 9 MNEPLLQVKGLKKYFPITAGLFNKQIGQVKAVDDLSFSVYKGETLGIVGESGCGKSTTGR 68 Query: 61 SLLRLIEPTAGEVWFEGRDITKLSXXXXXXXXXXXXIVFQDPFSSLDPRNTVQRILEEPM 120 LLRLIEPT G + FE ++TKLS ++FQDPF+SL+PR+TV++ILEEP+ Sbjct: 69 MLLRLIEPTEGSIIFENEEVTKLSPQQLRKLRRDMQMIFQDPFASLNPRHTVEKILEEPL 128 Query: 121 IVHGAGNAKERRAAVERLADVVGLAKAHLQRYPHQFSGGQRQRIGIARALALQPKLIIAD 180 IVHG G+ +ERR V + +VVGL+ H +RYPHQFSGGQRQRIGIARAL +PKLIIAD Sbjct: 129 IVHGIGSKEERRKKVREMLEVVGLSSYHAKRYPHQFSGGQRQRIGIARALMTKPKLIIAD 188 Query: 181 EPVSALDVSIQSQVINLMQDLQKEFGLTYIFIAHDLSVVKHICDRVAVMYLGRIVEITGK 240 EPVSALDVSIQ+QV+NL++DLQKEFGLTYIFIAHDL VV+HI DRV VMYLGR+VE+ Sbjct: 189 EPVSALDVSIQAQVLNLLEDLQKEFGLTYIFIAHDLGVVRHISDRVGVMYLGRMVELANS 248 Query: 241 NKLYDQPQHPYTQALLSAVPEPDPDIRKERVILQGEVPSPANAPVGCAFNTRCPRVMDVC 300 +Y P+HPYTQALL AVP PDP+ +KE+ +L G++PSP+N P GCAF+TRC MD+C Sbjct: 249 EDVYRNPKHPYTQALLEAVPIPDPEYKKEKQLLSGDLPSPSNPPAGCAFHTRCQACMDIC 308 Query: 301 RSTRPPLLETGAGHLTACHLY 321 ++T+P E GH ACHLY Sbjct: 309 KTTKPAWKEVEQGHYVACHLY 329 >A4IKK5.1 A4IKK5_GEOTN Oligopeptide ABC transporter ATP-binding protein Length = 322 Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust. Identities = 204/322 (63%), Positives = 252/322 (78%) Query: 1 MNDNLLEVRNLKKYYPVNKGFFNKTQAYIKAVDDISFSVRKGETFGLVGESGCGKSTTGR 60 M+D LLEV+ LKKY+P+ G F K +KAVDD++F+V +GET G+VGESGCGKSTTGR Sbjct: 1 MSDLLLEVKGLKKYFPITGGIFGKQIGMVKAVDDVTFTVYRGETLGIVGESGCGKSTTGR 60 Query: 61 SLLRLIEPTAGEVWFEGRDITKLSXXXXXXXXXXXXIVFQDPFSSLDPRNTVQRILEEPM 120 L+RLIEPT G + FEG+++T LS ++FQDPF+SL+PR+TV++ILEEP+ Sbjct: 61 MLMRLIEPTDGSITFEGKEVTALSKTELRRLRRDMQMIFQDPFASLNPRHTVEKILEEPL 120 Query: 121 IVHGAGNAKERRAAVERLADVVGLAKAHLQRYPHQFSGGQRQRIGIARALALQPKLIIAD 180 IVHG G+ +ER+ V + +VVGL H +RYPHQFSGGQRQRIGIARAL PKLIIAD Sbjct: 121 IVHGIGSKEERKRRVREMLEVVGLGSYHAKRYPHQFSGGQRQRIGIARALMTNPKLIIAD 180 Query: 181 EPVSALDVSIQSQVINLMQDLQKEFGLTYIFIAHDLSVVKHICDRVAVMYLGRIVEITGK 240 EPVSALDVSIQ+QV+NL++DLQK+FGLTYIFIAHDL VV+HI DRV VMYLGR+VE+ Sbjct: 181 EPVSALDVSIQAQVLNLLEDLQKQFGLTYIFIAHDLGVVRHISDRVGVMYLGRMVELADS 240 Query: 241 NKLYDQPQHPYTQALLSAVPEPDPDIRKERVILQGEVPSPANAPVGCAFNTRCPRVMDVC 300 LY+ P+HPYT+ALLSAVP PDPD + ER +L G++PSPAN P GCAF+TRC MD+C Sbjct: 241 ESLYEAPKHPYTKALLSAVPIPDPDHKAERQLLSGDLPSPANPPQGCAFHTRCSACMDIC 300 Query: 301 RSTRPPLLETGAGHLTACHLYD 322 R+ RP L E GH ACHLY+ Sbjct: 301 RAQRPALKEVATGHYVACHLYE 322 >B4BRM5.1 B4BRM5_9BACI Oligopeptide/dipeptide ABC transporter, ATPase subunit Length = 322 Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust. Identities = 204/322 (63%), Positives = 252/322 (78%) Query: 1 MNDNLLEVRNLKKYYPVNKGFFNKTQAYIKAVDDISFSVRKGETFGLVGESGCGKSTTGR 60 M+D LLEV+ LKKY+P+ G F K +KAVDD++F+V +GET G+VGESGCGKSTTGR Sbjct: 1 MSDLLLEVKGLKKYFPITGGIFGKQIGMVKAVDDVTFTVYRGETLGIVGESGCGKSTTGR 60 Query: 61 SLLRLIEPTAGEVWFEGRDITKLSXXXXXXXXXXXXIVFQDPFSSLDPRNTVQRILEEPM 120 L+RLIEPT G + FEG+++T LS ++FQDPF+SL+PR+TV++ILEEP+ Sbjct: 61 MLMRLIEPTDGSITFEGKEVTALSKTELRRLRRDMQMIFQDPFASLNPRHTVEKILEEPL 120 Query: 121 IVHGAGNAKERRAAVERLADVVGLAKAHLQRYPHQFSGGQRQRIGIARALALQPKLIIAD 180 IVHG G+ +ER+ V + +VVGL H +RYPHQFSGGQRQRIGIARAL PKLIIAD Sbjct: 121 IVHGIGSKEERKRRVREMLEVVGLGSYHAKRYPHQFSGGQRQRIGIARALMTNPKLIIAD 180 Query: 181 EPVSALDVSIQSQVINLMQDLQKEFGLTYIFIAHDLSVVKHICDRVAVMYLGRIVEITGK 240 EPVSALDVSIQ+QV+NL++DLQK+FGLTYIFIAHDL VV+HI DRV VMYLGR+VE+ Sbjct: 181 EPVSALDVSIQAQVLNLLEDLQKQFGLTYIFIAHDLGVVRHISDRVGVMYLGRMVELADS 240 Query: 241 NKLYDQPQHPYTQALLSAVPEPDPDIRKERVILQGEVPSPANAPVGCAFNTRCPRVMDVC 300 LY+ P+HPYT+ALLSAVP PDPD + ER +L G++PSPAN P GCAF+TRC MD+C Sbjct: 241 ESLYEAPKHPYTKALLSAVPIPDPDHKAERQLLSGDLPSPANPPQGCAFHTRCSACMDIC 300 Query: 301 RSTRPPLLETGAGHLTACHLYD 322 R+ RP L E GH ACHLY+ Sbjct: 301 RAQRPALKEVATGHYVACHLYE 322 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,968,587,458 Number of extensions: 81317733 Number of successful extensions: 551989 Number of sequences better than 1.0e-05: 80326 Number of HSP's gapped: 462189 Number of HSP's successfully gapped: 85244 Length of query: 337 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 201 Effective length of database: 1,779,438,163 Effective search space: 357667070763 Effective search space used: 357667070763 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)