BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0153.0008.p
         (127 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q897R5.1 Q897R5_CLOTE Putative uncharacterized protein                 62   2e-08

>Q897R5.1 Q897R5_CLOTE Putative uncharacterized protein
          Length = 204

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 13/87 (14%)

Query: 48  TALAVLLFMGLYVT---LGVFIYKDSSRKKMNTWLWLTAVFYIPNFMGVVLY-------- 96
           + + +L+F GL+V    +G F+Y D+ ++ M+ WLWL  V ++PNF+G+++Y        
Sbjct: 89  SIICLLMFGGLFVVWILIGRFVYYDAKKRGMDPWLWLLVVMFVPNFIGLIIYLIVRSSNN 148

Query: 97  --FYARRRHKIPAANDMHTQICPHCGH 121
             FY +R  K  +       ICP+CG 
Sbjct: 149 TKFYNKRCSKCGSNVREDYNICPNCGE 175


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.335    0.145    0.498 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 801,068,875
Number of extensions: 31288329
Number of successful extensions: 157684
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 157684
Number of HSP's successfully gapped: 1
Length of query: 127
Length of database: 3,060,696,203
Length adjustment: 92
Effective length of query: 35
Effective length of database: 2,193,962,823
Effective search space: 76788698805
Effective search space used: 76788698805
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 126 (53.1 bits)