BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0151.0011.p (250 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A2V8A7.1 A2V8A7_9CHRO HesA 170 1e-40 A6C6E8.1 A6C6E8_9PLAN MoeZ/MoeB 166 1e-39 B4WRU3.1 B4WRU3_9SYNE MoeZ/MoeB domain family 166 2e-39 A3IL38.1 A3IL38_9CHRO MoeZ/MoeB 166 2e-39 B4C2T7.1 B4C2T7_9CHRO UBA/THIF-type NAD/FAD binding protein 165 3e-39 >A2V8A7.1 A2V8A7_9CHRO HesA Length = 271 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 130/243 (53%), Gaps = 9/243 (3%) Query: 9 ELERYARQLKL--LGEEGQRALKEATVMVXXXXXXXXXXXXXXXXXXXXXXILAHEGIVV 66 ELERY+RQ++L GEEGQ+ LK++T +V IL G + Sbjct: 7 ELERYSRQIQLPDFGEEGQKRLKDSTAVVTGVGGLGGTVALYLAVAGVGKLILVRGGELR 66 Query: 67 PPDLNRQILMDTDHLGMERMSTAIAQLKRLNPHVEIEGHNARIEIPLARPWVQDADIVID 126 DLNRQILM +G R+ A L LNP + +E N + VQ ADI D Sbjct: 67 LDDLNRQILMTNSWVGQPRVYKAKETLLNLNPDIRVEAVNEFVTAENIDALVQQADIAFD 126 Query: 127 ARYDFPERYALNRLCVDTGTPMVEAAMYGFEISLTTVVPGVTPCLECLYPDVAPLWEPLG 186 +DF ER LN CV G PMVEAAM G + LTT++PG TPCL C++P+ P W+ G Sbjct: 127 CAFDFKERNLLNTACVRWGVPMVEAAMSGMDAYLTTIIPGETPCLSCIFPE-KPEWDRWG 185 Query: 187 FPVLGATSGIAGCLAALEAVKWITGVGTTYAGVMHRFSSLDFACYSVHISR---NPKCAC 243 F VLGA SG CLAALE +K++TGVG T G + ++D + R +P+C Sbjct: 186 FGVLGAVSGSLACLAALEGIKFLTGVGETLTG---QLLTMDLGTATFAKRRPYHDPECPV 242 Query: 244 CGE 246 CG Sbjct: 243 CGN 245 >A6C6E8.1 A6C6E8_9PLAN MoeZ/MoeB Length = 249 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 94/226 (41%), Positives = 117/226 (51%), Gaps = 1/226 (0%) Query: 20 LGEEGQRALKEATVMVXXXXXXXXXXXXXXXXXXXXXXILAHEGIVVPPDLNRQILMDTD 79 GE GQ LK A+V++ ++AH G V P DLNRQ+LM D Sbjct: 24 FGEAGQEKLKNASVLISRCGGLGSVVAYELAAAGIGKLVIAHAGNVKPSDLNRQLLMTHD 83 Query: 80 HLGMERMSTAIAQLKRLNPHVEIEGHNARIEIPLARPWVQDADIVIDARYDFPERYALNR 139 LG R+ +A +LK LNP +EI I A V D+++D FPERYA+NR Sbjct: 84 WLGKPRVESAERRLKELNPRLEIVAVPENISEQNAEQLVNQVDLIVDCAPLFPERYAMNR 143 Query: 140 LCVDTGTPMVEAAMYGFEISLTTVVPGVTPCLECLYPDVAPLWEPLGFPVLGATSGIAGC 199 V P+VE AMY E LTT +PG T CL CLYP P W+ FPV GA SG GC Sbjct: 144 QAVLQKKPLVECAMYDLEAQLTTFIPGQTGCLACLYPHDPPAWK-REFPVFGAVSGTVGC 202 Query: 200 LAALEAVKWITGVGTTYAGVMHRFSSLDFACYSVHISRNPKCACCG 245 +AA+EA+K I+G+G T A + F D I R CA CG Sbjct: 203 MAAMEAIKVISGLGETLANQLLMFDLRDMTFQRNRILRRTDCAVCG 248 >B4WRU3.1 B4WRU3_9SYNE MoeZ/MoeB domain family Length = 256 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/239 (42%), Positives = 122/239 (51%), Gaps = 3/239 (1%) Query: 9 ELERYARQLKL--LGEEGQRALKEATVMVXXXXXXXXXXXXXXXXXXXXXXILAHEGIVV 66 ELERY RQ+ L LGE GQR LK T +V IL G + Sbjct: 17 ELERYRRQMMLPGLGEAGQRQLKNTTALVTGVGGLGGTAALYLAVAGVGKLILVRGGDLQ 76 Query: 67 PPDLNRQILMDTDHLGMERMSTAIAQLKRLNPHVEIEGHNARIEIPLARPWVQDADIVID 126 DLNRQ+LM D +G R+ A L +LNP +EIE + +Q ADI +D Sbjct: 77 RDDLNRQVLMTDDWVGSPRVFKAKETLSKLNPDIEIEAVCEYVTDNNIESLLQHADIALD 136 Query: 127 ARYDFPERYALNRLCVDTGTPMVEAAMYGFEISLTTVVPGVTPCLECLYPDVAPLWEPLG 186 +DF ER LN CV PM+EAAM E LTT+VPG TPCL CL+P+ P W+ G Sbjct: 137 CAFDFTERDLLNGACVRQRKPMIEAAMNSMEAYLTTIVPGKTPCLTCLFPE-KPTWDRWG 195 Query: 187 FPVLGATSGIAGCLAALEAVKWITGVGTTYAGVMHRFSSLDFACYSVHISRNPKCACCG 245 F VLGA SG CLAALEA+K ITG+G G + H +P CA CG Sbjct: 196 FGVLGAVSGTLACLAALEAIKLITGLGEPLLGQLLTMDLARADFNKRHAYHDPDCAVCG 254 >A3IL38.1 A3IL38_9CHRO MoeZ/MoeB Length = 271 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 99/242 (40%), Positives = 128/242 (52%), Gaps = 7/242 (2%) Query: 9 ELERYARQLKL--LGEEGQRALKEATVMVXXXXXXXXXXXXXXXXXXXXXXILAHEGIVV 66 ELERY+RQ++L GEEGQ+ LK++T +V IL G + Sbjct: 7 ELERYSRQIQLPGFGEEGQKRLKDSTAVVTGVGGLGGTVALYLAVAGVGKIILVRGGELR 66 Query: 67 PPDLNRQILMDTDHLGMERMSTAIAQLKRLNPHVEIEGHNARIEIPLARPWVQDADIVID 126 DLNRQILM +G R+ A L +NP +EIE N + VQ ADI D Sbjct: 67 LDDLNRQILMTNSWVGQPRVYKARETLLNINPDIEIEAVNEFVTAENIDGLVQKADIAFD 126 Query: 127 ARYDFPERYALNRLCVDTGTPMVEAAMYGFEISLTTVVPGVTPCLECLYPDVAPLWEPLG 186 +DF ER LN+ CV G PMVEAAM G + LTT++PG TPCL C++P+ P W+ G Sbjct: 127 CAFDFKERTLLNKACVRWGVPMVEAAMSGMDAYLTTIIPGETPCLSCIFPET-PEWDRWG 185 Query: 187 FPVLGATSGIAGCLAALEAVKWITGVGTTYAG--VMHRFSSLDFACYSVHISRNPKCACC 244 F VLGA SG CLAALE +K +TG+G G + + FA + +P C C Sbjct: 186 FGVLGAVSGSLACLAALEGIKLLTGLGEPLTGQLLTMELGTATFAKRRPY--HDPNCPVC 243 Query: 245 GE 246 G Sbjct: 244 GN 245 >B4C2T7.1 B4C2T7_9CHRO UBA/THIF-type NAD/FAD binding protein Length = 266 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 101/242 (41%), Positives = 131/242 (54%), Gaps = 7/242 (2%) Query: 8 LELERYARQLKL--LGEEGQRALKEATVMVXXXXXXXXXXXXXXXXXXXXXXILAHEGIV 65 +ELERY+RQ++L GE+GQ+ LK +T +V IL G + Sbjct: 6 IELERYSRQMQLPGFGEKGQKQLKASTALVTGVGGLGGTVALYLAVAGIGKLILVRGGEL 65 Query: 66 VPPDLNRQILMDTDHLGMERMSTAIAQLKRLNPHVEIEGHNARIEIPLARPWVQDADIVI 125 DLNRQILM D +G R+ A L ++NP VEIE + VQ ADI I Sbjct: 66 RRDDLNRQILMTDDWVGKPRVFKAKETLSKINPDVEIEAVYDYVTPENVDELVQQADIAI 125 Query: 126 DARYDFPERYALNRLCVDTGTPMVEAAMYGFEISLTTVVPGVTPCLECLYPDVAPLWEPL 185 D +DF ER LN CV G PMVEAAM G + LTT++PG TPCL C++P+ P W+ Sbjct: 126 DCAFDFTERDLLNAACVRWGRPMVEAAMSGMDAYLTTIIPGETPCLSCIFPE-KPDWDRW 184 Query: 186 GFPVLGATSGIAGCLAALEAVKWITGVGTTYAG--VMHRFSSLDFACYSVHISRNPKCAC 243 GF VLGA SG CL+ALEA+K +TG+G G + +S FA + +P C Sbjct: 185 GFGVLGAVSGTLACLSALEAIKVLTGLGQPLTGELLTMELNSATFAKRRPY--HDPNCPV 242 Query: 244 CG 245 CG Sbjct: 243 CG 244 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.139 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,421,953,721 Number of extensions: 54773045 Number of successful extensions: 138124 Number of sequences better than 1.0e-05: 1773 Number of HSP's gapped: 136414 Number of HSP's successfully gapped: 1773 Length of query: 250 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 118 Effective length of database: 1,817,122,223 Effective search space: 214420422314 Effective search space used: 214420422314 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)