BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0149.0029.p (176 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q2BCX9.1 Q2BCX9_9BACI Potassium-transporting ATPase, C subunit 230 5e-59 B3K3Y7.1 B3K3Y7_9BACI Potassium-transporting ATPase, C subunit E... 226 6e-58 C2QNM5.1 C2QNM5_BACCE Potassium-transporting ATPase C chain 226 6e-58 B9IQY6.1 ATKC_BACCQ Potassium-transporting ATPase C chain EC=3.6... 226 8e-58 A0RA14.1 A0RA14_BACAH Potassium-transporting ATPase, subunit C E... 226 9e-58 >Q2BCX9.1 Q2BCX9_9BACI Potassium-transporting ATPase, C subunit Length = 193 Score = 230 bits (586), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 105/175 (60%), Positives = 142/175 (81%), Gaps = 3/175 (1%) Query: 2 IIILA---YQLVVTGIAQAVMPDKADGSLIYNDKHEVIGSKWIGQNFTSPGYFHGRISSI 58 I+ILA Y + TG+AQA+MPD+ADGSLIYN+++EV+GS+ IGQNFT P YFHGR+S+I Sbjct: 18 IMILAGLIYPIATTGMAQAIMPDQADGSLIYNEQNEVVGSELIGQNFTDPKYFHGRVSAI 77 Query: 59 EYNAVSSGTPNYAPSNPDMLERTKASVEAWKSENPGIPVSELPVDLITNSGSGLDPHISV 118 EYN SG+ NYAPSN D+L+R + S+EAWK+ NP P+SE+PVDL+T+SGSGLDPHISV Sbjct: 78 EYNGAGSGSNNYAPSNGDLLQRVEESIEAWKTANPDTPISEVPVDLVTDSGSGLDPHISV 137 Query: 119 EAAQVQIPRISKSTGISEEQLKELVAKHTQERELGVLGERVVNVLLLNIDVQKTV 173 E A Q+ RI TG+S++QL +L+ ++TQ +ELG+ GE VNVL+LN+D++K + Sbjct: 138 EGALAQVNRIMDETGLSKDQLTKLIKENTQGKELGLFGEERVNVLMLNLDLEKLL 192 >B3K3Y7.1 B3K3Y7_9BACI Potassium-transporting ATPase, C subunit EC=3.6.3.12 Length = 210 Score = 226 bits (576), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 105/168 (62%), Positives = 134/168 (79%) Query: 7 YQLVVTGIAQAVMPDKADGSLIYNDKHEVIGSKWIGQNFTSPGYFHGRISSIEYNAVSSG 66 Y LV TG AQ +MP +A GSL+ + +V+GS+ IGQ+FT P YFHGR+SSIEYN SG Sbjct: 41 YPLVTTGAAQLLMPKQAGGSLVTDRGGKVVGSELIGQDFTEPQYFHGRVSSIEYNGAGSG 100 Query: 67 TPNYAPSNPDMLERTKASVEAWKSENPGIPVSELPVDLITNSGSGLDPHISVEAAQVQIP 126 + NYAPSNPD++ERTKAS+EAW NP +PVSE+P+DL+TNSGSGLDPH+S +AA +QIP Sbjct: 101 SNNYAPSNPDLIERTKASIEAWTENNPDVPVSEVPIDLVTNSGSGLDPHLSPQAAYIQIP 160 Query: 127 RISKSTGISEEQLKELVAKHTQERELGVLGERVVNVLLLNIDVQKTVN 174 RISK TGI+E +L +LV +HT+ R+LGV GE VNVL LN+ +QK +N Sbjct: 161 RISKQTGIAEAELDQLVKEHTEGRDLGVFGEPRVNVLKLNLGLQKLLN 208 >C2QNM5.1 C2QNM5_BACCE Potassium-transporting ATPase C chain Length = 193 Score = 226 bits (576), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 108/167 (64%), Positives = 133/167 (79%) Query: 5 LAYQLVVTGIAQAVMPDKADGSLIYNDKHEVIGSKWIGQNFTSPGYFHGRISSIEYNAVS 64 L Y L+VTGIAQAVM D ADGSLIYNDK+EVIGSK IGQNFT P YFHGR+SSIEY A + Sbjct: 24 LVYPLIVTGIAQAVMKDNADGSLIYNDKNEVIGSKLIGQNFTDPRYFHGRVSSIEYKAEA 83 Query: 65 SGTPNYAPSNPDMLERTKASVEAWKSENPGIPVSELPVDLITNSGSGLDPHISVEAAQVQ 124 SG+ NYAPSNPD+ +R + S+E WK +NP +PV+E+P+DL+TNSGSGLDP IS +AA VQ Sbjct: 84 SGSNNYAPSNPDLEKRVEKSIEEWKKQNPSVPVTEVPIDLVTNSGSGLDPDISPKAASVQ 143 Query: 125 IPRISKSTGISEEQLKELVAKHTQERELGVLGERVVNVLLLNIDVQK 171 I RISK T I +E L++L+ T+ LG+ GE VNVL LN+++QK Sbjct: 144 IERISKLTKIPKETLEQLIKDQTEGAALGLFGENRVNVLKLNLELQK 190 >B9IQY6.1 ATKC_BACCQ Potassium-transporting ATPase C chain EC=3.6.3.12 Length = 193 Score = 226 bits (575), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 107/167 (64%), Positives = 133/167 (79%) Query: 5 LAYQLVVTGIAQAVMPDKADGSLIYNDKHEVIGSKWIGQNFTSPGYFHGRISSIEYNAVS 64 L Y L+VTGIAQAVM D ADGSLIYNDK+EVIGSK IGQNFT P YFHGR+SSIEY A + Sbjct: 24 LVYPLIVTGIAQAVMKDNADGSLIYNDKNEVIGSKLIGQNFTDPRYFHGRVSSIEYKAEA 83 Query: 65 SGTPNYAPSNPDMLERTKASVEAWKSENPGIPVSELPVDLITNSGSGLDPHISVEAAQVQ 124 SG+ NYAPSNPD+ +R + S+E WK +NP +PV+E+P+DL+TNSGSGLDP IS +AA VQ Sbjct: 84 SGSNNYAPSNPDLEKRVEKSIEEWKKQNPSVPVTEVPIDLVTNSGSGLDPDISPKAASVQ 143 Query: 125 IPRISKSTGISEEQLKELVAKHTQERELGVLGERVVNVLLLNIDVQK 171 + RISK T I +E L +L+ + T+ LG+ GE VNVL LN+++QK Sbjct: 144 VERISKITNIPKETLNQLIKEQTEGAALGLFGENRVNVLKLNLELQK 190 >A0RA14.1 A0RA14_BACAH Potassium-transporting ATPase, subunit C EC=3.6.3.12 Length = 205 Score = 226 bits (575), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 107/167 (64%), Positives = 133/167 (79%) Query: 5 LAYQLVVTGIAQAVMPDKADGSLIYNDKHEVIGSKWIGQNFTSPGYFHGRISSIEYNAVS 64 L Y L+VTGIAQAVM D ADGSLIYNDK+EVIGSK IGQNFT P YFHGR+SSIEY A + Sbjct: 36 LVYPLIVTGIAQAVMKDNADGSLIYNDKNEVIGSKLIGQNFTDPRYFHGRVSSIEYKAEA 95 Query: 65 SGTPNYAPSNPDMLERTKASVEAWKSENPGIPVSELPVDLITNSGSGLDPHISVEAAQVQ 124 SG+ NYAPSNPD+ +R + S+E WK +NP +PV+E+P+DL+TNSGSGLDP IS +AA VQ Sbjct: 96 SGSNNYAPSNPDLEKRVEKSIEEWKKQNPSVPVTEVPIDLVTNSGSGLDPDISPKAASVQ 155 Query: 125 IPRISKSTGISEEQLKELVAKHTQERELGVLGERVVNVLLLNIDVQK 171 + RISK T I +E L++L+ T+ LG+ GE VNVL LN+++QK Sbjct: 156 VERISKLTKIPKETLEQLIKDQTEGAALGLFGETRVNVLKLNLELQK 202 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.312 0.131 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,080,237,707 Number of extensions: 43770791 Number of successful extensions: 112715 Number of sequences better than 1.0e-05: 655 Number of HSP's gapped: 111525 Number of HSP's successfully gapped: 657 Length of query: 176 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 50 Effective length of database: 1,873,648,313 Effective search space: 93682415650 Effective search space used: 93682415650 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 126 (53.1 bits)