BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0149.0019.p (547 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0UZX1.1 C0UZX1_9BACT Putative uncharacterized protein 142 6e-32 C0V1T2.1 C0V1T2_9BACT Putative uncharacterized protein 110 4e-22 B8I995.1 B8I995_CLOCE Carbohydrate-binding family 9 105 9e-21 Q48494.1 Q48494_9BACL Chitinase 72 2e-10 B5I1R7.1 B5I1R7_9ACTO Secreted beta-mannosidase 70 6e-10 >C0UZX1.1 C0UZX1_9BACT Putative uncharacterized protein Length = 676 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 113/383 (29%), Positives = 184/383 (48%), Gaps = 26/383 (6%) Query: 17 PDGWESSQNVQLLEAVTIPAGSSIDLPYSILVPENTLKGRYDISFEILYNG--AVFDTKT 74 P GW +V V++ G + ++ P + G Y I+ Y+G AV + Sbjct: 312 PLGW----DVAGAGVVSLAPGERRTVELRVVPPTDVAVGSYRIAIGGRYDGVKAVVPIE- 366 Query: 75 VQLTVEDGLDVKLIPVKKTIEELDVLSVQLTGTSSFSKTGKVIVKGPDGVLLEPLTTDTF 134 V L + L+++++P+++ L V++ S+ +++G + ++ P G P ++ + Sbjct: 367 VDLELRPALELEVLPLRERPAAGTELRVRVANASAHAQSGTLALQLPAGWSASP-SSAAY 425 Query: 135 SGLQKGGSVRLDFLWTYHDRLPFNEYTLDMQIVETDKNKLIYHDPSLPLEFNLIQQAHGL 194 L G S + F T + FNEY + + T S L+F I + Sbjct: 426 GPLAPGESQTMSFELTAVRQADFNEYEVGISATYTAG----VVSASQALDFLAIPRGRA- 480 Query: 195 TIDGDLSDWEDAFPFHLRSKSQHA--SGYRDPGNLEAAAYAKWNAEGMYVAVSVQDDIHK 252 +DGDLSDW A P HL SQ A G+ P +L A Y W+ + +YVAV V D+ + Sbjct: 481 AVDGDLSDWRAALPIHLDRASQVAEKKGW-TPQDLSAVGYTMWDDDYLYVAVRVTDNAFR 539 Query: 253 QSENPANMWKNDSVQVSLDPLNNRESPYGPDDTEWGFALANDGRRLINIFNSTQPNPNGD 312 Q+ ++W+ D VQ ++D LNN+ Y DD+EWG L G ++ + S G Sbjct: 540 QTYTGGDVWRGDGVQFAIDALNNKSDSYDSDDSEWGLTLTPAGPQVWRWYGS------GG 593 Query: 313 VSGLTPFEAVRDEAAH---RTIYEFQLPASYIKDLKPELEGRIGLNIAVNDADLQNGRDD 369 + G E+ R +T+YE +P S I+ L P G+IG ++ VND D +GR Sbjct: 594 LPGNVLVESARLSVVRQGDQTVYEAAIPISEIRPLVPSPGGQIGFDLLVNDDD-GSGRSG 652 Query: 370 FVQWTQGTADSKNTSLYDSFIFI 392 +++WT G K L+DSF F+ Sbjct: 653 WIEWTPGIGYGKVPRLFDSFTFL 675 >C0V1T2.1 C0V1T2_9BACT Putative uncharacterized protein Length = 1141 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 102/205 (49%), Gaps = 10/205 (4%) Query: 192 HGL-TIDGDLSDWEDAFPFHLRS--KSQHASGYRDPGNLEAAAYAKWNAEGMYVAVSVQD 248 HG TIDGDLSDW A P H + K G+ P +L A A+ W+ + +Y A V D Sbjct: 838 HGTPTIDGDLSDWTRAAPVHADTADKVVGIPGW-TPQDLSATAWTMWDDDYLYFAAKVTD 896 Query: 249 DIHKQSENPANMWKNDSVQVSLDPLNNRESPYGPDDTEWGFALANDGRRLINIFNSTQPN 308 D Q N+W DSVQ+ D LN++ + DD EWG AL DG +F + Sbjct: 897 DTFSQPNTDGNIWMGDSVQLFFDTLNDKTTYQDEDDQEWGIALTPDGP---EVFRWSGGG 953 Query: 309 PNGDVSGLTPFEAVRDEAAHRTIYEFQLPASYIKDLKPELEGRIGLNIAVNDADLQNGRD 368 G V L AVR E T YE +P + + L+P R G VND D GR+ Sbjct: 954 GFGYVD-LARLAAVRGENGDVT-YELAIPLAELAPLRPAPSSRTGFTFLVNDDD-GGGRE 1010 Query: 369 DFVQWTQGTADSKNTSLYDSFIFID 393 ++ WT G ++ N SL+ ++ F++ Sbjct: 1011 GWISWTPGVGNAWNPSLFSTWTFVE 1035 >B8I995.1 B8I995_CLOCE Carbohydrate-binding family 9 Length = 2286 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 90/299 (30%), Positives = 134/299 (44%), Gaps = 44/299 (14%) Query: 216 QHASGYRDPGNLEAAAYAKWNAEGMYVAVSVQDDIHKQSENPANMWKNDSVQVSLDPLNN 275 +H + P N A W+ +YV V ++D + S + A+ + DSV++ +D N+ Sbjct: 1428 KHLTMANGPAN--GTAKVLWDDTNLYVLVRIKDPVLNSSNSAAH--EQDSVEIFVDETNS 1483 Query: 276 RESPYGPDDTEWGFALANDGRRLINIFNSTQPNPNGDVSGLTPFEAVRDEAAHRTIYEFQ 335 + + YG A G+ IN N+ NP+ +G F V D + E + Sbjct: 1484 KAASYG----------AGMGQYRINYLNAKSFNPSSISTGFESFAKVVDGGYY---IETK 1530 Query: 336 LPASYIKDLKPELEGR---IGLNIAVNDADLQNGRDDFVQWTQGTADS-KNTSLYDSFIF 391 +P K PE+ IG ++ +NDA GR D V W T +S N S + Sbjct: 1531 IP---FKTGVPEIPKNGHVIGFDVQINDAGATGGRQDIVMWHDETGNSWSNGSQWGVVTL 1587 Query: 392 IDYTPPEPSADSESPTWPGYAAVTASDVTTNSVTLNWTEAQDNTAVTGYRIIWGDSVSMS 451 + S D+ +PTWP + +TA ++ N+VTLNW+ AQD+ VT Y I G + Sbjct: 1588 VK----ADSNDTAAPTWPEGSTMTAPEIGINAVTLNWSPAQDDVGVTSYEIYNGTDMIGK 1643 Query: 452 VHGSVTDAVYGTVTDSVYATATSAVITGLNADTPYTFIVYARDAAGNWSVNGLEVRMRT 510 V G++ S LNA+T YTF V A D AGN S +G V T Sbjct: 1644 VAGNI----------------NSFEAANLNAETEYTFTVQAVDQAGNTSTDGPSVTFTT 1686 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 89/201 (44%), Gaps = 31/201 (15%) Query: 347 ELEGRIGLNIAVNDADLQNGRDDFVQWTQGTADSKNTSLYDSFIFIDYTPPEPSADSESP 406 ++ G++ NI +A N ++ Q + NTS + P + D+E+P Sbjct: 1639 DMIGKVAGNINSFEAANLNAETEYTFTVQAVDQAGNTSTDGPSVTFTTLPDDGQGDTEAP 1698 Query: 407 TWPGYAAVTASDVTTNSVTLNWTEAQDNTAVTGYRIIWGDSVSMSVHGSVTDAVYGTVTD 466 WP +++ S+VT +TL W A DNTAVTGY I G + + G V Sbjct: 1699 YWPEGSSIAVSEVTETGLTLTWPAALDNTAVTGYVIYDGATQVAVLAGDV---------- 1748 Query: 467 SVYATATSAVITGLNADTPYTFIVYARDAAGNWSVNGLEVRMRT---------------A 511 TS I+GL A T YTF + A+DA+ NWS GL V T Sbjct: 1749 ------TSYAISGLKAGTEYTFTIKAKDASLNWSETGLSVTETTKQEEPKDTTAPVWPEG 1802 Query: 512 SMPSAAGVIWTPFQADAVASR 532 S SAAGV T Q + A++ Sbjct: 1803 STLSAAGVSQTGLQLNWTAAQ 1823 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 16/114 (14%) Query: 395 TPPEPSADSESPTWPGYAAVTASDVTTNSVTLNWTEAQDNTAVTGYRIIWGDSVSMSVHG 454 T E D+ +P WP + ++A+ V+ + LNWT AQD+T V Y++ G ++ +V G Sbjct: 1786 TKQEEPKDTTAPVWPEGSTLSAAGVSQTGLQLNWTAAQDDTGVNSYKVYRGSTLIATVPG 1845 Query: 455 SVTDAVYGTVTDSVYATATSAVITGLNADTPYTFIVYARDAAGNWSVNGLEVRM 508 T +S ++GL++ T Y F V A DAAGNWS NG V + Sbjct: 1846 ----------------TTSSYNVSGLSSGTSYVFSVQAGDAAGNWSSNGPTVNV 1883 >Q48494.1 Q48494_9BACL Chitinase Length = 699 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 23/154 (14%) Query: 395 TPPEPSADSESPTWPGYAAVTASDVTTNSVTLNWTEAQDNTAVTGYRIIWGDSVSMSVHG 454 T +P D+++PT P A TA TT+S+TL+W + DN VTGY + G +++ SV G Sbjct: 549 TTTQPGGDTQAPTAPTNLASTAQ--TTSSITLSWAASTDNVGVTGYDVYNGTALATSVTG 606 Query: 455 SVTDAVYGTVTDSVYATATSAVITGLNADTPYTFIVYARDAAGNWSVNGLEVRMRTASMP 514 T+A I+GL ADT YTF V A+DAAGN SV + ++TA+ Sbjct: 607 ------------------TTATISGLAADTSYTFTVKAKDAAGNSSVASNALTVKTAAGT 648 Query: 515 SAAGVIWTPFQAD-AVASRQVAKFRPEEYGHHQT 547 + GV + +QA+ A Q+ + + Y Q+ Sbjct: 649 TNPGV--SAWQANTAYTVGQLVTYSGKTYKCLQS 680 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 20/116 (17%) Query: 399 PSADSESPTWPGYAAVTASDVTTNSVTLNWTEAQDNTAVTGYRIIWGDSVSMSVHGSVTD 458 P AD+ +P+ PG A T VT NSVTL W + DN VTGY + G +++ SV+G Sbjct: 458 PPADTTAPSVPGNARSTG--VTVNSVTLAWNASTDNVGVTGYNVYNGANLAASVNG---- 511 Query: 459 AVYGTVTDSVYATATSAVITGLNADTPYTFIVYARDAAGNWSVNGLEVRMRTASMP 514 T+A I+GL+A T YTF + A+DAAGN S V + T + P Sbjct: 512 --------------TTATISGLSAGTSYTFTIKAKDAAGNLSAASNAVTVSTTTQP 553 >B5I1R7.1 B5I1R7_9ACTO Secreted beta-mannosidase Length = 549 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 48/118 (40%), Positives = 62/118 (52%), Gaps = 16/118 (13%) Query: 400 SADSESPTWPGYAAVTASDVTTNSVTLNWTEAQDNTAVTGYRIIWGDSVSMSVHGSVTDA 459 S D+++PT PG TAS VT S L WT + DN V GY ++ V G Sbjct: 344 STDTQAPTAPGTP--TASAVTATSARLTWTASTDNVGVAGYDVV-------RVSG----- 389 Query: 460 VYGTVTDSVYATATSAVITGLNADTPYTFIVYARDAAGNWSVNGLEVRMRTASMPSAA 517 GT T + +T S +TGL A T Y+F VYARDAAGN S V + TA+ P+ + Sbjct: 390 --GTETKAAASTTNSVTVTGLTAGTAYSFAVYARDAAGNRSARSATVGVTTANAPAGS 445 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.132 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,476,709,017 Number of extensions: 153547701 Number of successful extensions: 275396 Number of sequences better than 1.0e-05: 143 Number of HSP's gapped: 275725 Number of HSP's successfully gapped: 165 Length of query: 547 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 406 Effective length of database: 1,732,333,088 Effective search space: 703327233728 Effective search space used: 703327233728 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)