BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0147.0029.p (487 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2VAB9.1 C2VAB9_BACCE Putative uncharacterized protein 362 4e-98 C2TW02.1 C2TW02_BACCE Putative uncharacterized protein 362 4e-98 A9VQI7.1 A9VQI7_BACWK Group-specific protein 361 8e-98 C3A4J0.1 C3A4J0_BACMY Putative uncharacterized protein 361 9e-98 C2UTX2.1 C2UTX2_BACCE Putative uncharacterized protein 360 2e-97 >C2VAB9.1 C2VAB9_BACCE Putative uncharacterized protein Length = 491 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 196/475 (41%), Positives = 291/475 (61%), Gaps = 10/475 (2%) Query: 11 EPTLHTALLQFIFPFSLKEGEDMNLIRQLTQDGFTRFFLNNKELEDAYYGEGYCVSHEKM 70 E + TA+ QFIFPFS K G + N+ L ++ F F L++ E E+ YYG+ + VSH+ M Sbjct: 9 EKDVTTAIFQFIFPFSFKTGYEQNMFPFLQKNNFRPFRLDHLEDENTYYGQ-FQVSHQNM 67 Query: 71 ERSYLPFAAHVLFPREKDRDSFRRFSRVNNLSCRLDMPAQSVHFQVLSTDVFICPFELGF 130 E YL F +LFP + + +R+S+ NL+ L SV F++ S DV +CP+ELGF Sbjct: 68 EAYYLSFTNKILFPHSEHQKGLQRYSKDLNLNGHLTTNLISVPFKIHSIDVTLCPYELGF 127 Query: 131 LTIRIRIEEEV-LPFSIALEFADRFRTLEDVSYQDKQTTIHCHDRSFKQVEDFVFRHLAR 189 LTIR ++ + S A+EFA RFR LE + + I C + + QVE +F L Sbjct: 128 LTIRTEVKTAPNMTLSEAIEFASRFRVLETRNDTTETICIECDGKKYSQVEKLIFGDLYH 187 Query: 190 GLEPFLDPSEINGAYFETLPFFVDERMLVQAFYGFDRREEAEGISEALRYRASQLDGLTP 249 GL F + + +YF+T PFF D+RM VQ +++ + + YRAS L GLT Sbjct: 188 GLTDFFENKRLRSSYFQTFPFFEDQRMYVQTLLSINKKSDLHVVD---VYRASSLSGLTD 244 Query: 250 EGKPLISASDPDYIEDYCREHSYSRWGPDTYYMTNEQTFCCLSRAEPGIATQLVNQMYGE 309 +GKP ISA++ YI DY +HSY RW P+ Y++ E F C++ T+L +QMYGE Sbjct: 245 DGKPYISANNVPYIHDYLTKHSYQRWAPNRYFIMEEHIFTCITNEGEKEVTKLASQMYGE 304 Query: 310 YYYGLLLSIFHKIVLLKLANMHSRLRINHDYDEIEKLIFLINKFSAKFYFLELISQTQGR 369 +YY LLL++FHK+VLLK+AN ++ L I D +EIEKLI+ IN F+A ++ LEL+SQ+Q Sbjct: 305 FYYALLLNLFHKVVLLKMANAYAELNIEQDTNEIEKLIYSINSFTANYFSLELVSQSQSE 364 Query: 370 EIFFQLRKVYGNDALFEEVKMTLNDLFQYQEKFQAKRRDTLLMILTVFTVVSGIYGMNQV 429 +IFF+LRK++ + L+ K L+ LF+YQE AK+ LL+ILT+++VV + G + Sbjct: 365 DIFFRLRKLFNIEILYSNAKQNLDSLFKYQENVAAKKDSLLLLILTLYSVVGQMLGFTMI 424 Query: 430 IEDLKGKIEWRKMLEYSPFEYLALFVALTGIAVSIGLSLKQLWS-GIRSRRRKRY 483 DL + K+ SP E+ AL +A++GI +S L ++ L+ GI+ RRR+ + Sbjct: 425 --DLLRNTDSNKI--SSPLEFFALLIAISGIVISFILGVQSLYQWGIQHRRRQAW 475 >C2TW02.1 C2TW02_BACCE Putative uncharacterized protein Length = 491 Score = 362 bits (929), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 196/475 (41%), Positives = 291/475 (61%), Gaps = 10/475 (2%) Query: 11 EPTLHTALLQFIFPFSLKEGEDMNLIRQLTQDGFTRFFLNNKELEDAYYGEGYCVSHEKM 70 E + TA+ QFIFPFS K G + N+ L ++ F F L++ E E+ YYG+ + VSH+ M Sbjct: 9 EKDVTTAIFQFIFPFSFKTGYEQNMFPFLQKNNFRPFRLDHLEDENTYYGQ-FQVSHQNM 67 Query: 71 ERSYLPFAAHVLFPREKDRDSFRRFSRVNNLSCRLDMPAQSVHFQVLSTDVFICPFELGF 130 E YL F +LFP + + +R+S+ NL+ L SV F++ S DV +CP+ELGF Sbjct: 68 EAYYLSFTNKILFPHSEHQKGLQRYSKDLNLNGHLTTNLISVPFKIHSIDVTLCPYELGF 127 Query: 131 LTIRIRIEEEV-LPFSIALEFADRFRTLEDVSYQDKQTTIHCHDRSFKQVEDFVFRHLAR 189 LTIR ++ + S A+EFA RFR LE + + I C + + QVE +F L Sbjct: 128 LTIRTEVKTAPNMTLSEAIEFASRFRVLETRNDTTETICIECDGKKYSQVEKLIFGDLYH 187 Query: 190 GLEPFLDPSEINGAYFETLPFFVDERMLVQAFYGFDRREEAEGISEALRYRASQLDGLTP 249 GL F + + +YF+T PFF D+RM VQ +++ + + YRAS L GLT Sbjct: 188 GLTDFFENKRLRSSYFQTFPFFEDQRMYVQTLLSINKKSDLHVVD---VYRASSLSGLTD 244 Query: 250 EGKPLISASDPDYIEDYCREHSYSRWGPDTYYMTNEQTFCCLSRAEPGIATQLVNQMYGE 309 +GKP ISA++ YI DY +HSY RW P+ Y++ E F C++ T+L +QMYGE Sbjct: 245 DGKPYISANNVPYIHDYLTKHSYQRWAPNRYFIMEEHIFTCITNEGEQEVTKLASQMYGE 304 Query: 310 YYYGLLLSIFHKIVLLKLANMHSRLRINHDYDEIEKLIFLINKFSAKFYFLELISQTQGR 369 +YY LLL++FHK+VLLK+AN ++ L I D +EIEKLI+ IN F+A ++ LEL+SQ+Q Sbjct: 305 FYYALLLNLFHKVVLLKMANAYAELNIEQDTNEIEKLIYSINSFTANYFSLELVSQSQSE 364 Query: 370 EIFFQLRKVYGNDALFEEVKMTLNDLFQYQEKFQAKRRDTLLMILTVFTVVSGIYGMNQV 429 +IFF+LRK++ + L+ K L+ LF+YQE AK+ LL+ILT+++VV + G + Sbjct: 365 DIFFRLRKLFNIEILYSNAKQNLDSLFKYQENVAAKKDSLLLLILTLYSVVGQMLGFTMI 424 Query: 430 IEDLKGKIEWRKMLEYSPFEYLALFVALTGIAVSIGLSLKQLWS-GIRSRRRKRY 483 DL + K+ SP E+ AL +A++GI +S L ++ L+ GI+ RRR+ + Sbjct: 425 --DLLRNTDSNKI--SSPLEFFALLIAISGIVISFILGVQSLYQWGIQHRRRQAW 475 >A9VQI7.1 A9VQI7_BACWK Group-specific protein Length = 491 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 198/476 (41%), Positives = 292/476 (61%), Gaps = 12/476 (2%) Query: 11 EPTLHTALLQFIFPFSLKEGEDMNLIRQLTQDGFTRFFLNNKELEDAYYGEGYCVSHEKM 70 E + TA+ QFIFPFS K G + N+ L ++ F F L++ E E+ YYG+ + VSH+ M Sbjct: 9 EKDVTTAIFQFIFPFSFKTGYEQNMFPFLQKNDFRPFRLDHLEDENTYYGK-FQVSHQNM 67 Query: 71 ERSYLPFAAHVLFPREKDRDSFRRFSRVNNLSCRLDMPAQSVHFQVLSTDVFICPFELGF 130 E YL F +LFP + + +R+S+ NL+ L SV F++ S DV +CP+ELGF Sbjct: 68 EAYYLSFTNKILFPHSEHQKGLQRYSKDLNLNGHLTTNLISVPFKIHSIDVTLCPYELGF 127 Query: 131 LTIRIRIEEEV-LPFSIALEFADRFRTLEDVSYQDKQTTIHCHDRSFKQVEDFVFRHLAR 189 LTIR I+ + S A+EFA RFR LE S + I C + + QVE +F L Sbjct: 128 LTIRTEIKTAPNMTLSEAIEFAARFRVLETKSDTTETICIECDGKKYSQVEKLIFGDLFH 187 Query: 190 GLEPFLDPSEINGAYFETLPFFVDERMLVQAFYGFDRREEAEGISEALRYRASQLDGLTP 249 GL F + + +YF+T PFF D+RM VQ ++ + I YRAS L GL+ Sbjct: 188 GLTDFFENKRLRSSYFQTFPFFEDQRMYVQTLLSINKESDLHIID---VYRASSLSGLSD 244 Query: 250 EGKPLISASDPDYIEDYCREHSYSRWGPDTYYMTNEQTFCCLSRAEPGIATQLVNQMYGE 309 +GKP ISA++ YI DY +HSY RW P+ Y++ E F C++ T+L +QMYGE Sbjct: 245 DGKPYISANNVPYIHDYLTKHSYQRWAPNRYFIMEEHIFTCITNEGEQAVTKLASQMYGE 304 Query: 310 YYYGLLLSIFHKIVLLKLANMHSRLRINHDYDEIEKLIFLINKFSAKFYFLELISQTQGR 369 +YY LLL++FHK+VLLK+AN ++ L I D +EIEKLI+ IN F+A ++ LEL+SQ+Q Sbjct: 305 FYYALLLNLFHKVVLLKMANAYAELNIEQDTNEIEKLIYSINSFTANYFSLELVSQSQSE 364 Query: 370 EIFFQLRKVYGNDALFEEVKMTLNDLFQYQEKFQAKRRDTLLMILTVFTVVSGIYGMNQV 429 +IFF+LRK++ + L+ K L+ LF+YQE +K+ LL+ILT+++VV + G + Sbjct: 365 DIFFRLRKLFNIEVLYTNAKQNLDSLFKYQENVASKKDSLLLLILTLYSVVGQMLGFTMI 424 Query: 430 IEDLKGKIEWRKMLEYSPFEYLALFVALTGIAVSIGLSLKQL--WSGIRSRRRKRY 483 DL + K+ SPFE+ AL +A++GI +S+ L ++ L WS ++ +RRK + Sbjct: 425 --DLLRNTDSNKI--SSPFEFFALLIAISGIVISLILGIQSLYQWS-VQHKRRKAW 475 >C3A4J0.1 C3A4J0_BACMY Putative uncharacterized protein Length = 491 Score = 361 bits (927), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 198/476 (41%), Positives = 292/476 (61%), Gaps = 12/476 (2%) Query: 11 EPTLHTALLQFIFPFSLKEGEDMNLIRQLTQDGFTRFFLNNKELEDAYYGEGYCVSHEKM 70 E + TA+ QFIFPFS K G + N+ L ++ F F L++ E E+ YYG+ + VSH+ M Sbjct: 9 EKDVTTAIFQFIFPFSFKTGYEQNMFPFLQKNDFRPFRLDHLEDENTYYGK-FQVSHQNM 67 Query: 71 ERSYLPFAAHVLFPREKDRDSFRRFSRVNNLSCRLDMPAQSVHFQVLSTDVFICPFELGF 130 E YL F +LFP + + +R+S+ NL+ L SV F++ S DV +CP+ELGF Sbjct: 68 EAYYLSFTNKILFPHSEHQKGLQRYSKDLNLNGHLTTNLISVPFKIHSIDVTLCPYELGF 127 Query: 131 LTIRIRIEEEV-LPFSIALEFADRFRTLEDVSYQDKQTTIHCHDRSFKQVEDFVFRHLAR 189 LTIR I+ + S A+EFA RFR LE S + I C + + QVE +F L Sbjct: 128 LTIRTEIKTAPNMTLSEAIEFAARFRVLETNSDTTETICIECDGKKYSQVEKLIFGDLFH 187 Query: 190 GLEPFLDPSEINGAYFETLPFFVDERMLVQAFYGFDRREEAEGISEALRYRASQLDGLTP 249 GL F + + +YF+T PFF D+RM VQ ++ + I YRAS L GL+ Sbjct: 188 GLTDFFENKRLRSSYFQTFPFFEDQRMYVQTLLSINKESDLHIID---VYRASSLSGLSD 244 Query: 250 EGKPLISASDPDYIEDYCREHSYSRWGPDTYYMTNEQTFCCLSRAEPGIATQLVNQMYGE 309 +GKP ISA++ YI DY +HSY RW P+ Y++ E F C++ T+L +QMYGE Sbjct: 245 DGKPYISANNVPYIHDYLTKHSYQRWAPNRYFIMEEHIFTCITNEGEQAVTKLASQMYGE 304 Query: 310 YYYGLLLSIFHKIVLLKLANMHSRLRINHDYDEIEKLIFLINKFSAKFYFLELISQTQGR 369 +YY LLL++FHK+VLLK+AN ++ L I D +EIEKLI+ IN F+A ++ LEL+SQ+Q Sbjct: 305 FYYALLLNLFHKVVLLKMANAYAELNIEQDTNEIEKLIYSINSFTANYFSLELVSQSQSE 364 Query: 370 EIFFQLRKVYGNDALFEEVKMTLNDLFQYQEKFQAKRRDTLLMILTVFTVVSGIYGMNQV 429 +IFF+LRK++ + L+ K L+ LF+YQE +K+ LL+ILT+++VV + G + Sbjct: 365 DIFFRLRKLFNIEVLYTNAKQNLDSLFKYQENVASKKDSLLLLILTLYSVVGQMLGFTMI 424 Query: 430 IEDLKGKIEWRKMLEYSPFEYLALFVALTGIAVSIGLSLKQL--WSGIRSRRRKRY 483 DL + K+ SPFE+ AL +A++GI +S+ L ++ L WS ++ +RRK + Sbjct: 425 --DLLRNTDSNKI--SSPFEFFALLIAISGIVISLILGIQSLYQWS-VQHKRRKAW 475 >C2UTX2.1 C2UTX2_BACCE Putative uncharacterized protein Length = 491 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 195/475 (41%), Positives = 290/475 (61%), Gaps = 10/475 (2%) Query: 11 EPTLHTALLQFIFPFSLKEGEDMNLIRQLTQDGFTRFFLNNKELEDAYYGEGYCVSHEKM 70 E + TA+ QFIFPFS K G + N+ L ++ F F L++ E E+ YYG+ + VSH+ M Sbjct: 9 EKDVTTAIFQFIFPFSFKTGYEQNMFPFLQKNNFRPFRLDHLEDENTYYGQ-FQVSHQNM 67 Query: 71 ERSYLPFAAHVLFPREKDRDSFRRFSRVNNLSCRLDMPAQSVHFQVLSTDVFICPFELGF 130 E YL F +LFP + + +R+S+ NL+ L SV F++ S DV +CP+ELGF Sbjct: 68 EAYYLSFTNKILFPHSEHQKGLQRYSKDLNLNGHLTTNLISVPFKIHSIDVTLCPYELGF 127 Query: 131 LTIRIRIEEEV-LPFSIALEFADRFRTLEDVSYQDKQTTIHCHDRSFKQVEDFVFRHLAR 189 LTIR ++ + S A+EFA RFR LE + + I C + + QVE +F L Sbjct: 128 LTIRTEVKTAPNMTLSEAIEFASRFRVLETRNDTTETICIECDGKKYSQVEKLIFGDLYH 187 Query: 190 GLEPFLDPSEINGAYFETLPFFVDERMLVQAFYGFDRREEAEGISEALRYRASQLDGLTP 249 GL F + + +YF+T PFF D+RM VQ +++ + + YRAS L GLT Sbjct: 188 GLTDFFENKRLRSSYFQTFPFFEDQRMYVQTLLSINKKSDLHVVD---VYRASSLSGLTD 244 Query: 250 EGKPLISASDPDYIEDYCREHSYSRWGPDTYYMTNEQTFCCLSRAEPGIATQLVNQMYGE 309 +GKP IS ++ YI DY +HSY RW P+ Y++ E F C++ T+L +QMYGE Sbjct: 245 DGKPYISTNNVPYIHDYLTKHSYQRWAPNRYFIMEEHIFTCITNEGEQEVTKLASQMYGE 304 Query: 310 YYYGLLLSIFHKIVLLKLANMHSRLRINHDYDEIEKLIFLINKFSAKFYFLELISQTQGR 369 +YY LLL++FHK+VLLK+AN ++ L I D +EIEKLI+ IN F+A ++ LEL+SQ+Q Sbjct: 305 FYYALLLNLFHKVVLLKMANAYAELNIEQDTNEIEKLIYSINSFTANYFSLELVSQSQSE 364 Query: 370 EIFFQLRKVYGNDALFEEVKMTLNDLFQYQEKFQAKRRDTLLMILTVFTVVSGIYGMNQV 429 +IFF+LRK++ + L+ K L+ LF+YQE AK+ LL+ILT+++VV + G + Sbjct: 365 DIFFRLRKLFNIEILYSNAKQNLDSLFKYQENVAAKKDSLLLLILTLYSVVGQMLGFTMI 424 Query: 430 IEDLKGKIEWRKMLEYSPFEYLALFVALTGIAVSIGLSLKQLWS-GIRSRRRKRY 483 DL + K+ SP E+ AL +A++GI +S L ++ L+ GI+ RRR+ + Sbjct: 425 --DLLRNTDSNKI--SSPLEFFALLIAISGIVISFILGVQSLYQWGIQHRRRQAW 475 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.325 0.141 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,829,126,079 Number of extensions: 117086461 Number of successful extensions: 330441 Number of sequences better than 1.0e-05: 75 Number of HSP's gapped: 330161 Number of HSP's successfully gapped: 75 Length of query: 487 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 347 Effective length of database: 1,741,754,103 Effective search space: 604388673741 Effective search space used: 604388673741 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 133 (55.8 bits)