BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0147.0024.p (312 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K4H0.1 B3K4H0_9BACI ABC transporter related 408 e-112 Q2B1G1.1 Q2B1G1_9BACI Probable ABC transporter, ATP-binding prot... 361 5e-98 A4IPR1.1 A4IPR1_GEOTN ABC transporter ATP-binding protein 341 5e-92 B4BNU0.1 B4BNU0_9BACI ABC transporter-related protein 341 5e-92 B1HZR9.1 B1HZR9_LYSSC ABC transporter (ATP-binding protein) 339 2e-91 >B3K4H0.1 B3K4H0_9BACI ABC transporter related Length = 304 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 208/304 (68%), Positives = 242/304 (79%) Query: 9 MTETVIETRDLLKEYRGRAAVEQLNLNIGKGEIYGFLGPNGAGKTTTIRMLLGLIKPTSG 68 MTE VI+T+ L K Y+ RAAV LNL I +G+IYGFLGPNGAGKTTTIRMLLGLI+PT G Sbjct: 1 MTELVIQTKGLYKIYKKRAAVVDLNLEIARGDIYGFLGPNGAGKTTTIRMLLGLIQPTRG 60 Query: 69 SINIFGQDLKRNKLQILRKVGSLVESPSYYGHLSALDNLEAIRRILDVPKSRIAEVLEIV 128 +I++FG+DLK K+ ILR+ GSLVE PSYYGHL+A++NLEAIRRI PKSRIAEVLE+V Sbjct: 61 AIHLFGKDLKSEKMDILRRTGSLVEYPSYYGHLTAVENLEAIRRITGGPKSRIAEVLEMV 120 Query: 129 SLTGEEKRPVKGFSLGMKQRLGIAAALLGSPELLILDEPTNGLDPSGIQEIRSLIKRLPV 188 SLT E KRPVKG+SLGMKQRLGIAAALL +PELLILDEPTNGLDPSGI EIR LIK +P Sbjct: 121 SLTKEAKRPVKGYSLGMKQRLGIAAALLNNPELLILDEPTNGLDPSGIHEIRELIKNMPR 180 Query: 189 EEGITVLVSSHLLSEIEQMAGTVGIIRAGRMVYQDTIAQLQQQAAGDLRLAVSEPEEALI 248 + GITVLVSSHLL E+EQMA VGIIR GRMV+QDTI L A+ RL+VSEPE AL Sbjct: 181 QYGITVLVSSHLLGEVEQMADKVGIIREGRMVFQDTIDNLVSTASSGFRLSVSEPEAALG 240 Query: 249 LANRRGCGGTLQEGRITLPRMSDVRVALLIKELVENGHAIYRVEEHRQSLEEFFLQVVEG 308 LA GC G L+ + L M D ++A L+K LVEN HA+YRVEE R+SLE+ F+Q+V Sbjct: 241 LALDLGCEGVLRNQMLELESMQDAKIAQLVKRLVENQHAVYRVEEQRRSLEDIFMQIVGE 300 Query: 309 GQSV 312 G V Sbjct: 301 GSRV 304 >Q2B1G1.1 Q2B1G1_9BACI Probable ABC transporter, ATP-binding protein; probable MrsF protein Length = 303 Score = 361 bits (927), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 186/302 (61%), Positives = 235/302 (77%), Gaps = 2/302 (0%) Query: 9 MTETVIETRDLLKEYRGRAAVEQLNLNIGKGEIYGFLGPNGAGKTTTIRMLLGLIKPTSG 68 M+E ++ET L K++ R+AVE ++L + KGEIYGFLGPNGAGKTTTIRMLLGL +PT G Sbjct: 1 MSELILETNGLTKKFGKRSAVENVDLRLAKGEIYGFLGPNGAGKTTTIRMLLGLARPTGG 60 Query: 69 SINIFGQDLKRNKLQILRKVGSLVESPSYYGHLSALDNLEAIRRILDVPKSRIAEVLEIV 128 SI+IFG+DLK+ KLQILRKVGSLVE PSYYGHL+A++NLEA+RRIL+VPKSRI EVL IV Sbjct: 61 SIHIFGRDLKKEKLQILRKVGSLVEYPSYYGHLTAIENLEALRRILEVPKSRIDEVLAIV 120 Query: 129 SLTGEEKRPVKGFSLGMKQRLGIAAALLGSPELLILDEPTNGLDPSGIQEIRSLIKRLPV 188 L+ E KRPVKGFSLGMKQRLGIAAALL +PELLILDEPTNGLDPSGI EIR LIK +P Sbjct: 121 RLSKEAKRPVKGFSLGMKQRLGIAAALLANPELLILDEPTNGLDPSGILEIRELIKSMPA 180 Query: 189 EEGITVLVSSHLLSEIEQMAGTVGIIRAGRMVYQDTIAQLQQQAAGDLRLAVSEPEEALI 248 + G+T+LVSSHLLSEI+QMA VGII G M++QD+I L+Q+A + + V+E E+A Sbjct: 181 QHGMTILVSSHLLSEIDQMATQVGIISKGSMIFQDSIHVLRQKANSQIAITVNETEKAWR 240 Query: 249 LANRRGCGGTLQEGRITLPRMSDVRVALLIKELVENGHAIYRVEEHRQSLEEFFLQVV-E 307 G + + L +D +VA ++ LV + ++YRV+E R++LE+ FL++ E Sbjct: 241 ALLSNGIQAEKKREHLLLDG-TDTQVAAAVETLVRHDVSVYRVQEQRKTLEDIFLELTGE 299 Query: 308 GG 309 GG Sbjct: 300 GG 301 >A4IPR1.1 A4IPR1_GEOTN ABC transporter ATP-binding protein Length = 303 Score = 341 bits (875), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 170/301 (56%), Positives = 223/301 (74%) Query: 11 ETVIETRDLLKEYRGRAAVEQLNLNIGKGEIYGFLGPNGAGKTTTIRMLLGLIKPTSGSI 70 E ++ET L K + AV LNL I +GE+YGFLGPNGAGK+TT+RMLLGL++PT+GSI Sbjct: 2 EYIVETHHLTKRFGKEIAVNALNLKIPRGEVYGFLGPNGAGKSTTLRMLLGLMRPTAGSI 61 Query: 71 NIFGQDLKRNKLQILRKVGSLVESPSYYGHLSALDNLEAIRRILDVPKSRIAEVLEIVSL 130 IFG+DLK+ ++ ILR VGSLVESPSYY HL+A +NLEA+R+IL PK +I EVL++V L Sbjct: 62 RIFGKDLKKERISILRNVGSLVESPSYYSHLTAYENLEAMRKILGSPKEKIDEVLDLVRL 121 Query: 131 TGEEKRPVKGFSLGMKQRLGIAAALLGSPELLILDEPTNGLDPSGIQEIRSLIKRLPVEE 190 + + VKGFSLGMKQRLGIA ALL P+LLILDEPTNGLDPSGI E+R+LIKRLP E+ Sbjct: 122 SNAADKKVKGFSLGMKQRLGIAMALLNDPKLLILDEPTNGLDPSGIIEMRNLIKRLPKEK 181 Query: 191 GITVLVSSHLLSEIEQMAGTVGIIRAGRMVYQDTIAQLQQQAAGDLRLAVSEPEEALILA 250 ITVL+SSHLLSEI+Q+A VG+I G++++QD+I ++ +A +RL VS+ A Sbjct: 182 DITVLISSHLLSEIDQVATYVGVISKGKLIFQDSIKAMRNKAQLKIRLKVSDANNAYRSL 241 Query: 251 NRRGCGGTLQEGRITLPRMSDVRVALLIKELVENGHAIYRVEEHRQSLEEFFLQVVEGGQ 310 +G Q+ I L SD VA +++ LV+ G+++YRVEE QSLE+ FL++ GG Sbjct: 242 LAKGIKTHYQDHIIYLYEQSDEAVAAVVETLVDEGYSVYRVEEEHQSLEDIFLKMTAGGD 301 Query: 311 S 311 Sbjct: 302 D 302 >B4BNU0.1 B4BNU0_9BACI ABC transporter-related protein Length = 303 Score = 341 bits (875), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 170/301 (56%), Positives = 223/301 (74%) Query: 11 ETVIETRDLLKEYRGRAAVEQLNLNIGKGEIYGFLGPNGAGKTTTIRMLLGLIKPTSGSI 70 E ++ET L K + AV LNL I +GE+YGFLGPNGAGK+TT+RMLLGL++PT+GSI Sbjct: 2 EYIVETHHLTKRFGKEIAVNALNLKIPRGEVYGFLGPNGAGKSTTLRMLLGLMRPTAGSI 61 Query: 71 NIFGQDLKRNKLQILRKVGSLVESPSYYGHLSALDNLEAIRRILDVPKSRIAEVLEIVSL 130 IFG+DLK+ ++ ILR VGSLVESPSYY HL+A +NLEA+R+IL PK +I EVL++V L Sbjct: 62 RIFGKDLKKERISILRNVGSLVESPSYYSHLTAYENLEAMRKILGSPKEKIDEVLDLVRL 121 Query: 131 TGEEKRPVKGFSLGMKQRLGIAAALLGSPELLILDEPTNGLDPSGIQEIRSLIKRLPVEE 190 + + VKGFSLGMKQRLGIA ALL P+LLILDEPTNGLDPSGI E+R+LIKRLP E+ Sbjct: 122 SNAADKKVKGFSLGMKQRLGIAMALLNDPKLLILDEPTNGLDPSGIIEMRNLIKRLPKEK 181 Query: 191 GITVLVSSHLLSEIEQMAGTVGIIRAGRMVYQDTIAQLQQQAAGDLRLAVSEPEEALILA 250 ITVL+SSHLLSEI+Q+A VG+I G++++QD+I ++ +A +RL VS+ A Sbjct: 182 DITVLISSHLLSEIDQVATYVGVISKGKLIFQDSIKAMRNKAQLKIRLKVSDANNAYRSL 241 Query: 251 NRRGCGGTLQEGRITLPRMSDVRVALLIKELVENGHAIYRVEEHRQSLEEFFLQVVEGGQ 310 +G Q+ I L SD VA +++ LV+ G+++YRVEE QSLE+ FL++ GG Sbjct: 242 LAKGIKTHYQDHIIYLYEQSDEAVAAVVETLVDEGYSVYRVEEEHQSLEDIFLKMTAGGD 301 Query: 311 S 311 Sbjct: 302 D 302 >B1HZR9.1 B1HZR9_LYSSC ABC transporter (ATP-binding protein) Length = 311 Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 176/310 (56%), Positives = 234/310 (75%), Gaps = 5/310 (1%) Query: 1 MLVTEVKKMTETVIETRDLLKEYRGRAAVEQLNLNIGKGEIYGFLGPNGAGKTTTIRMLL 60 M+V EV+K+ E +++T++L K + AV +NL I KGEIYGFLGPNGAGKTTTIRMLL Sbjct: 1 MIVKEVRKL-EYIVQTQNLSKNFGKEQAVSNINLQIRKGEIYGFLGPNGAGKTTTIRMLL 59 Query: 61 GLIKPTSGSINIFGQDLKRNKLQILRKVGSLVESPSYYGHLSALDNLEAIRRILDVPKSR 120 GL+KP+SG+I IF +D+ ++++QIL VGSLVE+PSYY HL+A +NLEA+R+IL VPK+R Sbjct: 60 GLMKPSSGTIKIFQKDIVKDRIQILANVGSLVENPSYYPHLTAYENLEALRKILGVPKTR 119 Query: 121 IAEVLEIVSLTGEEKRPVKGFSLGMKQRLGIAAALLGSPELLILDEPTNGLDPSGIQEIR 180 I EVL+ V L + VKGFSLGMKQRLGIAAALL +PELLILDEPTNGLDPSGI EIR Sbjct: 120 IDEVLQTVRLKEAANKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGIIEIR 179 Query: 181 SLIKRLPVEEGITVLVSSHLLSEIEQMAGTVGIIRAGRMVYQDTIAQLQQQAAGDLRLAV 240 +LIKRLP E G+T+++SSHLLSEI+QMA VGI+ G +++QD+I +++ A + V Sbjct: 180 NLIKRLPKEYGMTIIISSHLLSEIDQMATQVGIVSKGTLIFQDSIEGMRKFAQPKVTFKV 239 Query: 241 SEPEEAL--ILANRRGCGGTLQEGRITLPRMSDVRVALLIKELVENGHAIYRVEEHRQSL 298 S E+ +LAN G Q+ I L SD +VA +++ LV+ G +++RVEE ++SL Sbjct: 240 SNGEKGWRSLLAN--GIKANYQDDVIFLEECSDEKVAHIVQVLVQEGISVFRVEEEKRSL 297 Query: 299 EEFFLQVVEG 308 E+ FLQ+ G Sbjct: 298 EDIFLQMTAG 307 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.137 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,750,382,654 Number of extensions: 73213477 Number of successful extensions: 528727 Number of sequences better than 1.0e-05: 94461 Number of HSP's gapped: 423795 Number of HSP's successfully gapped: 102292 Length of query: 312 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 177 Effective length of database: 1,788,859,178 Effective search space: 316628074506 Effective search space used: 316628074506 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 131 (55.1 bits)