BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0147.0022.p (225 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K4H2.1 B3K4H2_9BACI Putative uncharacterized protein 237 6e-61 Q2B1G3.1 Q2B1G3_9BACI Putative uncharacterized protein 214 5e-54 A4IPR3.1 A4IPR3_GEOTN Putative uncharacterized protein 178 4e-43 B4BNT8.1 B4BNT8_9BACI Putative uncharacterized protein 178 4e-43 A3I6V3.1 A3I6V3_9BACI Putative uncharacterized protein 174 4e-42 >B3K4H2.1 B3K4H2_9BACI Putative uncharacterized protein Length = 244 Score = 237 bits (605), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 110/198 (55%), Positives = 138/198 (69%) Query: 28 WEVLLSVMSLFHAMFFLPVLSGVFAALICRAEHADGGWKQLLALPVTRTSVYLAKYTMIM 87 WE L+S+M + HAM LP+L+G+F+A++CR EH+ GGWKQLL LPV+R +VY AK++++ Sbjct: 47 WEYLISIMIVLHAMLLLPILTGIFSAMVCRYEHSGGGWKQLLVLPVSRGAVYFAKFSVVA 106 Query: 88 XXXXXXXXXXXXXXXGVGALRGVDVPIPWTMFLASSFGGWLACMPLAALQLAISQSWSSF 147 G G + VD PIPW M L GGW+AC+PLAALQL +S +WSSF Sbjct: 107 MLLAVVQLLFMGAVLGAGLIHKVDAPIPWEMLLRCLLGGWVACLPLAALQLGVSTAWSSF 166 Query: 148 GAPLALNVTLTMPNMLIANSSTYGPYDPWLQPMLAMSPFGEDRFGAFNLPLESLMTVVLG 207 APLALNV T+PNML+ANS TY PY PW QP LAM P G+ FGAFNLP ESLMTVV+G Sbjct: 167 AAPLALNVVFTIPNMLVANSQTYAPYYPWTQPFLAMMPAGQADFGAFNLPFESLMTVVVG 226 Query: 208 SLILFLAVGLLSFRRKAV 225 +LF G + F+RK V Sbjct: 227 GFLLFFLAGFVYFQRKEV 244 >Q2B1G3.1 Q2B1G3_9BACI Putative uncharacterized protein Length = 244 Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 140/218 (64%), Gaps = 5/218 (2%) Query: 13 IGALANMQEGGQP-----VTWEVLLSVMSLFHAMFFLPVLSGVFAALICRAEHADGGWKQ 67 + ALA E P + W LS M+ HA+ FLP+L+GVF+A +CR EH GGWKQ Sbjct: 27 LAALAGFGEADHPGMEGELQWLYTLSSMAFVHALLFLPLLTGVFSAFVCRYEHLGGGWKQ 86 Query: 68 LLALPVTRTSVYLAKYTMIMXXXXXXXXXXXXXXXGVGALRGVDVPIPWTMFLASSFGGW 127 LL+LPV+R +VY+ K++++M V L+G D PIPW + L S GGW Sbjct: 87 LLSLPVSRRNVYIVKFSLVMGLIAVSQLLFLGGLLLVAQLKGFDAPIPWKIILESIAGGW 146 Query: 128 LACMPLAALQLAISQSWSSFGAPLALNVTLTMPNMLIANSSTYGPYDPWLQPMLAMSPFG 187 +AC+P+AALQ+ +S +WSSF APLA+NV T+PN+L+ANS TYGP+ PW QP L M P Sbjct: 147 VACLPVAALQMFVSAAWSSFAAPLAINVVFTLPNILVANSETYGPFYPWAQPFLTMIPRM 206 Query: 188 EDRFGAFNLPLESLMTVVLGSLILFLAVGLLSFRRKAV 225 + FGA N +E+L+ V+LG +LF G+ F+RK + Sbjct: 207 GEEFGALNASMETLLIVILGGFVLFFLSGMTYFQRKEI 244 >A4IPR3.1 A4IPR3_GEOTN Putative uncharacterized protein Length = 247 Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 90/196 (45%), Positives = 121/196 (61%) Query: 28 WEVLLSVMSLFHAMFFLPVLSGVFAALICRAEHADGGWKQLLALPVTRTSVYLAKYTMIM 87 WE L++ +L +A+ FLP+ +G+ A LICR EH +GGWKQLLALPVTR+ V+LAKYT++M Sbjct: 49 WEFLIAFTTLLYALRFLPLTTGILAGLICRYEHQNGGWKQLLALPVTRSRVFLAKYTILM 108 Query: 88 XXXXXXXXXXXXXXXGVGALRGVDVPIPWTMFLASSFGGWLACMPLAALQLAISQSWSSF 147 G L+G + P P + S FGGW+A +PL ALQL +S + SF Sbjct: 109 LITLTIQLLYLLAIWTSGVLKGAEEPFPMMLLWKSIFGGWIATLPLLALQLWMSMLFKSF 168 Query: 148 GAPLALNVTLTMPNMLIANSSTYGPYDPWLQPMLAMSPFGEDRFGAFNLPLESLMTVVLG 207 AP A+NV T+P +L NS +GP PW QP L M G+ F +P E ++TV+ G Sbjct: 169 AAPFAVNVVFTLPAILAVNSEKFGPLYPWAQPFLMMYVSGDAENDIFFVPWEQVLTVIGG 228 Query: 208 SLILFLAVGLLSFRRK 223 S ++F GLL FRRK Sbjct: 229 SFLIFFFGGLLYFRRK 244 >B4BNT8.1 B4BNT8_9BACI Putative uncharacterized protein Length = 247 Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 90/196 (45%), Positives = 121/196 (61%) Query: 28 WEVLLSVMSLFHAMFFLPVLSGVFAALICRAEHADGGWKQLLALPVTRTSVYLAKYTMIM 87 WE L++ +L +A+ FLP+ +G+ A LICR EH +GGWKQLLALPVTR+ V+LAKYT++M Sbjct: 49 WEFLIAFTTLLYALRFLPLTTGILAGLICRYEHQNGGWKQLLALPVTRSRVFLAKYTILM 108 Query: 88 XXXXXXXXXXXXXXXGVGALRGVDVPIPWTMFLASSFGGWLACMPLAALQLAISQSWSSF 147 G L+G + P P + S FGGW+A +PL ALQL +S + SF Sbjct: 109 LITLTIQLLYLLAIWTSGVLKGAEEPFPMMLLWKSIFGGWIATLPLLALQLWMSMLFKSF 168 Query: 148 GAPLALNVTLTMPNMLIANSSTYGPYDPWLQPMLAMSPFGEDRFGAFNLPLESLMTVVLG 207 AP A+NV T+P +L NS +GP PW QP L M G+ F +P E ++TV+ G Sbjct: 169 AAPFAVNVVFTLPAILAVNSEKFGPLYPWAQPFLMMYVSGDAENDIFFVPWEQVLTVIGG 228 Query: 208 SLILFLAVGLLSFRRK 223 S ++F GLL FRRK Sbjct: 229 SFLIFFFGGLLYFRRK 244 >A3I6V3.1 A3I6V3_9BACI Putative uncharacterized protein Length = 245 Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 133/227 (58%), Gaps = 4/227 (1%) Query: 2 LVIGSPAVAIPIGALANMQEG--GQPVT-WEVLLSVMSLFHAMFFLPVLSGVFAALICRA 58 +++ P + + IG AN+++ G P+ W + L M+L +A+ FLP+++GVFA+LICR Sbjct: 20 IILAGPIIGLFIGLSANLEDNMSGVPINEWYIALFSMNLTYALLFLPLITGVFASLICRY 79 Query: 59 EHADGGWKQLLALPVTRTSVYLAKYTMIMXXXXXXXXXXXXXXXGVGALRGVDVPIPWTM 118 EH GGWKQLLALPVTR V++AKY +I+ VG ++G P P + Sbjct: 80 EHQSGGWKQLLALPVTRGKVFVAKYVLIVLLVMAMQILYLCSVFTVGMIKGYTDPFPMEI 139 Query: 119 FLASSFGGWLACMPLAALQLAISQSWSSFGAPLALNVTLTMPNMLIANSSTYGPYDPWLQ 178 S GGW+A +PL ALQL +S + SF AP A+NV T+P++ NS GPY PW Q Sbjct: 140 VWKSIVGGWVATLPLVALQLWMSIMFKSFAAPFAVNVVFTLPSIFAINSERIGPYYPWAQ 199 Query: 179 PMLAMSPFGEDRFGAFNLPLESLMTVVLGSLILFLAVGLLSFRRKAV 225 P +M G F +P E L+TVV G ILF G F+RKA+ Sbjct: 200 P-FSMMYIGGSTDDVFFVPWEQLLTVVGGGFILFFLGGYYYFQRKAI 245 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.326 0.139 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,255,433,729 Number of extensions: 46278357 Number of successful extensions: 162001 Number of sequences better than 1.0e-05: 59 Number of HSP's gapped: 161980 Number of HSP's successfully gapped: 59 Length of query: 225 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 94 Effective length of database: 1,826,543,238 Effective search space: 171695064372 Effective search space used: 171695064372 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 129 (54.3 bits)