BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0147.0014.p
         (71 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1YKJ2.1 B1YKJ2_EXIS2 Transglycosylase-associated protein              59   1e-07
B9CSM1.1 B9CSM1_STACP Transglycosylase-associated protein              55   3e-06
Q2BA51.1 Q2BA51_9BACI Putative uncharacterized protein                 54   5e-06

>B1YKJ2.1 B1YKJ2_EXIS2 Transglycosylase-associated protein
          Length = 83

 Score = 58.9 bits (141), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 44/65 (67%)

Query: 1  LAGLIMGRDIPGGVIGNIIAXXXXXXXXXXXXXXXXPKISDFYVFPSLIGAIVLIFIVSL 60
          +A LI+G+D+PGG+IGNI+A                P I+ F + P+++GAI+LIFIVSL
Sbjct: 16 VASLIIGKDVPGGIIGNIVAGFVGAMIGQAIFGSMGPDIAGFAIIPAILGAIILIFIVSL 75

Query: 61 ILRSV 65
          ILRSV
Sbjct: 76 ILRSV 80


>B9CSM1.1 B9CSM1_STACP Transglycosylase-associated protein
          Length = 84

 Score = 54.7 bits (130), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%)

Query: 6  MGRDIPGGVIGNIIAXXXXXXXXXXXXXXXXPKISDFYVFPSLIGAIVLIFIVSLILR 63
          MG+DIPGG++GNIIA                P++   ++FP+L+G+I+LIF++SL+LR
Sbjct: 22 MGKDIPGGILGNIIAGIVGSWVGTAILGHWGPQLGKIHIFPALLGSIILIFLISLVLR 79


>Q2BA51.1 Q2BA51_9BACI Putative uncharacterized protein
          Length = 85

 Score = 53.9 bits (128), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 40/60 (66%)

Query: 6  MGRDIPGGVIGNIIAXXXXXXXXXXXXXXXXPKISDFYVFPSLIGAIVLIFIVSLILRSV 65
          +GRDIPGGVIGNIIA                P ++DF + P++IGA+VL+F++SLI++ +
Sbjct: 22 VGRDIPGGVIGNIIAGFVGAWLGTLILGDWGPVVADFAIIPAIIGAVVLVFVLSLIMKGM 81


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.330    0.153    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 303,252,278
Number of extensions: 6841227
Number of successful extensions: 22969
Number of sequences better than 1.0e-05: 118
Number of HSP's gapped: 23068
Number of HSP's successfully gapped: 118
Length of query: 71
Length of database: 3,060,696,203
Length adjustment: 42
Effective length of query: 29
Effective length of database: 2,665,013,573
Effective search space: 77285393617
Effective search space used: 77285393617
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 126 (53.1 bits)