BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0147.0012.p (713 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DFM3.1 B1DFM3_9BACL Putative uncharacterized protein 563 e-158 C0GCF5.1 C0GCF5_9FIRM Putative uncharacterized protein 500 e-139 A6CHT1.1 A6CHT1_9BACI Putative secreted protein 415 e-114 A8VZ00.1 A8VZ00_9BACI Putative uncharacterized protein 393 e-107 A2TV12.1 A2TV12_9FLAO Putative secreted protein 337 3e-90 >B1DFM3.1 B1DFM3_9BACL Putative uncharacterized protein Length = 755 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 314/701 (44%), Positives = 406/701 (57%), Gaps = 22/701 (3%) Query: 7 LGIPTGLGTAADVMXXXXXXXXXXXXXGNILAVMLALTGLPIPRLYXXXXXXXXXXXXXX 66 LG+PTG GT DV ++A++L+L +P+PRL+ Sbjct: 60 LGMPTGFGTFIDVGAFVLANAVALLIASQLIAIILSLMYVPVPRLFAGFLIYVGFECYYI 119 Query: 67 FYYADXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRRF-TMGXXXXXXXXXXXXXXXTRGN 125 YY+D R R M + Sbjct: 120 LYYSDFEILNSILCAVFYTIIGAVVGILIGWFSRSRLRLMSGIILAALMVSGVFIWLKEP 179 Query: 126 GDTSPEASVSNGGP-------APIDAENPGEPGNYTYRSFTYGSGQDLHRSEYGDEAELT 178 A+V G A IDA+NPGEPG+Y+YR FTYGSG D R E+G AEL Sbjct: 180 YGGGHAAAVFAGAEETGASEVAAIDADNPGEPGSYSYRFFTYGSGTDKQRKEFGKGAELI 239 Query: 179 TATVDASAYITSWPKLRTLFWGFDHSSLPVNARVWMPDGEGPYPLVLMVHGNHMMEDYSE 238 +A+VDAS YI +W ++ FWGFD LP+N RVWMPDG+GP+PLVLMVHGNH+MED+S+ Sbjct: 240 SASVDASDYIKNWYWMKERFWGFDEEKLPLNGRVWMPDGDGPFPLVLMVHGNHLMEDFSD 299 Query: 239 GGYAYLGEQLASRGFIAVSLDENFLNYSAWSGIPDNDFKVRTWMILKHLQQIGIFAEQSG 298 GY YLG+ LASRG+IA+S+DENFLNYS WSGIPDNDFKVR WM+LKH+QQI F+E+ Sbjct: 300 AGYDYLGKLLASRGYIAISVDENFLNYSTWSGIPDNDFKVRAWMLLKHIQQIQTFSEKPD 359 Query: 299 NPFYQKVDYSRTALLGHSRGGQAVAMAADAGRWFKNDPALAA--AAQFHIASVIALAPTD 356 + FY KVD+S AL+GHSRGGQAVAMAAD WF D L + Q I +VIALAPTD Sbjct: 360 SAFYNKVDFSNIALIGHSRGGQAVAMAADPDTWFAGDRTLDSLNKEQVRIQTVIALAPTD 419 Query: 357 KAIDNQQARLEDVNYLTLQGARDGDVHDFYGDRQYIRSSFTGAASSFKSSLYIADANHSQ 416 KAIDN+ A L DVNYL LQGARDGDV+DFYGDRQYIR+SF+ + K+S+Y+++ANHS+ Sbjct: 420 KAIDNKSANLSDVNYLVLQGARDGDVNDFYGDRQYIRTSFSPGSGYMKASVYLSEANHSR 479 Query: 417 FNTSWGLYDQSLPAGLFLDRTDIMDGDAQRQITKVYVTAFLEATLDGKEVYQDLFRDYRS 476 FNT WG D+ P GLFL + +M+ Q++ +VYV+AFLE TL +E Y L +DYR+ Sbjct: 480 FNTEWGTMDERPPGGLFLSQRGMMEPSEQQEAAQVYVSAFLETTLHQQEEYIPLLQDYRT 539 Query: 477 GLQWLP-GTAYYNRFQSGGNIVVATFDEDRNKNTV-TGGTAEAAGL-AWREEVAKDRESK 533 GL WLP TAY +R++ +A +DEDRNK T+ GG E L +W E KDR+ Sbjct: 540 GLDWLPDSTAYVSRYEDSSFDAIARYDEDRNKTTLPEGGKLEEDNLKSWDELDVKDRDHN 599 Query: 534 SKATYGLVLEHSTKGGGEGYYRIRLKNSIXXXXXXXXXXXXTFSMANRNADSKETPDAVQ 593 +K T G +E + Y + L TFS+AN S+ PD Sbjct: 600 NKGTVGAQVEWLE----DSSYTLSLAEPFSLASAAEANRMFTFSLANLA--SQLDPD--H 651 Query: 594 AAASPDVEVELKDGNHAAARLPLKEVMDILPLPQTRFTLLPWLEERMSDGKYGDLSEAVF 653 + P +++EL LPL M + T +T++PWLE+ + GKY +E+VF Sbjct: 652 QDSVPQIQIELLSTEGDTIILPLNAYMPVQQPFVTTYTIIPWLEKTIKSGKYKHDTESVF 711 Query: 654 QTYELPFERFIEVEPGLDPDKLSEITFYLQGEGDKIMLDDI 694 QT+ +P F + D +SEITF G KIMLDDI Sbjct: 712 QTFRVPLNDFADAVDNKDL-SISEITFRFIGGPGKIMLDDI 751 >C0GCF5.1 C0GCF5_9FIRM Putative uncharacterized protein Length = 734 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 272/701 (38%), Positives = 373/701 (53%), Gaps = 13/701 (1%) Query: 5 AVLGIPTGLGTAADVMXXXXXXXXXXXXXGNILAVMLALTGLPIPRLYXXXXXXXXXXXX 64 A LG PTGLG D++ + A +L+L LP+PRL+ Sbjct: 41 AGLGNPTGLGLIPDLIIYFTLHIIGFFLLTRVTAFLLSLMHLPVPRLFVSSLLCTGFLTY 100 Query: 65 XXFYYADXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRRFTMGXXXXXXXXXXXXXXXTR- 123 Y R+ ++ Sbjct: 101 YILYLDKLGILFSAIIGVTYAVAGFLLGLFIFFLTSRKISLKQKTAFVMLPVAFYLIFLF 160 Query: 124 --GNGDTS-PEASVSNGGPAPIDAENPGEPGNYTYRSFTYGSGQDLHRSEYGDEAELTTA 180 GDT+ P S G P+ +P PG Y Y FTYGSG D HR E+ AEL + Sbjct: 161 WPPGGDTAHPGFSPDAGQIVPLSGNSPATPGGYPYHYFTYGSGGDKHRPEFNSGAELLST 220 Query: 181 TVDASAYITSWPKLRTLFWGFDHSSLPVNARVWMPDGEGPYPLVLMVHGNHMMEDYSEGG 240 +VDAS YI WP +R FWGFD +S+P+N RVWMP+GEGP+PLVL+VHGNH ME +S+ G Sbjct: 221 SVDASHYIDEWPWVRNFFWGFDETSIPLNGRVWMPEGEGPFPLVLIVHGNHRMEHFSDDG 280 Query: 241 YAYLGEQLASRGFIAVSLDENFLNYSAWSGIPDNDFKVRTWMILKHLQQIGIFAEQSGNP 300 Y YLG+ LASRGFIA+S+D+NFLNYS WSGIP D K+R W++++HL QI F P Sbjct: 281 YGYLGKLLASRGFIAISVDQNFLNYSGWSGIPKEDMKLRAWILMQHLLQIEDFQRMPDTP 340 Query: 301 FYQKVDYSRTALLGHSRGGQAVAMAADAGRWFKNDPALAAAAQFHIASVIALAPTDKAID 360 FY++VD AL+GHSRGGQA AM AD WF +DP ++ I +V+ +APTD+ I+ Sbjct: 341 FYRQVDLQNIALIGHSRGGQAAAMVADYTTWFTDDPTVSGMEDLGIQAVVGIAPTDRRIN 400 Query: 361 NQQARLEDVNYLTLQGARDGDVHDFYGDRQYIRSSFTGAASSFKSSLYIADANHSQFNTS 420 + A L D YL L GA+DGDV+ F GDRQY R+ F + FK+S+YI +ANHSQFN+ Sbjct: 401 GRAANLNDTFYLVLHGAQDGDVNSFVGDRQYARTDFEQGSRRFKASVYIGEANHSQFNSD 460 Query: 421 WGLYDQSLPAGLFLDRTDIMDGDAQRQITKVYVTAFLEATLDGKEVYQDLFRDYRSGLQW 480 WG D S P GLFL+ DIM+ Q+++T+VY+ AFLE L G + + LF+DYR G W Sbjct: 461 WGRMDSSPPRGLFLNLRDIMEPQEQQKVTQVYIAAFLETALRGNQQFIPLFKDYRFGANW 520 Query: 481 LPGTAYYNRFQSGGNIVVATFDEDRNKNTVTGGT-AEAAGLA-WREEVAKDRESKSKATY 538 LP Y +RF G + + F+ + ++ EA G + W + A DR ++K Y Sbjct: 521 LPDAKYISRFADGQIVPMTEFERNSDQTAFEYDVEVEAEGFSLWEIQEALDRRRRNKGFY 580 Query: 539 GLVLEHSTKGGGEGYYRIRLKNSIXXXXXXXXXXXXTFSMANRNADSKETPDAVQAAASP 598 G+ L EG Y L ++ SMAN + + D +P Sbjct: 581 GVTLAWED----EGRYSTILTDAYRAQLSGQPQSVIV-SMANLEREIAK--DYTFPLFAP 633 Query: 599 DVEVELKDGNHAAARLPLKEVMDILPLPQTRFTLLPWLEERMSDGKYGDLSEAVFQTYEL 658 +EVEL+ ++ A RLPL + M ++ + W + M GKY + +E VFQTYEL Sbjct: 634 VIEVELQTTDNIAVRLPLDQFMPFAEQIYIQYGKMSWFDSLMRSGKYEEAAEPVFQTYEL 693 Query: 659 PFERFIEVEPGLDPDKLSEITFYLQGEGDKIMLDDISFYLK 699 P + F E P L +K++ +T + K+M+D + F LK Sbjct: 694 PLQVFKEQNPDLQAEKIASVTLHFSSGPGKVMIDSLGFSLK 734 >A6CHT1.1 A6CHT1_9BACI Putative secreted protein Length = 749 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/570 (40%), Positives = 327/570 (57%), Gaps = 24/570 (4%) Query: 139 PAPIDAENPGEPGNYTYRSFTYGSGQDLHRSEYGDEAELTTATVDASAYITSWPKLRTLF 198 P P+ NP + G Y R+FTYGSG D R ++ + E T TV+AS W K RT F Sbjct: 196 PKPLQVGNPSQKGVYEVRTFTYGSGTDKRRPQFAEGVEYRTDTVNASFVTGGWDKYRTWF 255 Query: 199 WGFDHSSLPVNARVWMPDGEGPYPLVLMVHGNHMMEDYSEGGYAYLGEQLASRGFIAVSL 258 WGFD + +P+N VWMP+G G +PLVLMVHGNH+ME++S+ GYAYLGE LASRG+IAVS+ Sbjct: 256 WGFDRAEIPLNGTVWMPEGNGEFPLVLMVHGNHIMEEFSDEGYAYLGELLASRGYIAVSV 315 Query: 259 DENFLNYSAWSGIPDNDFKVRTWMILKHLQQIGIFAEQSGNPFYQKVDYSRTALLGHSRG 318 DENFLN S+WSG +N+ R W++LKHL Q F E P + KVD+ ALLGHSRG Sbjct: 316 DENFLNTSSWSGSLNNEISTRAWLMLKHLNQFEEFNEIKNMPLHNKVDFDNIALLGHSRG 375 Query: 319 GQAVAMAADAGRW--FKNDPALAAAAQFHIASVIALAPTDK-AIDNQQARLEDVNYLTLQ 375 GQAVA+A + + + N+ + + I S+IA+APTD + ++ +E+VNYL L Sbjct: 376 GQAVAVATEFNKLDRYPNNGIVTFNFDYKIKSIIAIAPTDYFTLSDKPVEMENVNYLLLH 435 Query: 376 GARDGDVHDFYGDRQYIRSSFTGAASSFKSSLYIADANHSQFNTSWGLYDQSLPAGLFLD 435 G+ D DV +F GDRQY +FT K+SLYI ANH QFNT WG D +LP LF++ Sbjct: 436 GSYDSDVSEFSGDRQYNDLTFTDENDWMKTSLYIHGANHGQFNTVWGDNDTTLPMNLFIN 495 Query: 436 RTDIMDGDAQRQITKVYVTAFLEATLDGKEVYQDLFRDYRSGLQWLPGTAYYNRFQSGGN 495 + +++G+ QRQI K Y++AFL+ATL K Y+ LF+DY LQWLP T Y NR+ Sbjct: 496 KKPLLEGEEQRQIAKTYISAFLDATLKEKTEYKPLFQDYSYALQWLPDTIYVNRYSDNDF 555 Query: 496 IVVATFDEDRNKNTVTGG--TAEAAGLA-WREEVAKDRESKSKATYGLVLEHSTKGGGEG 552 V+ ++ D + T T +A+ L W E + RE + +G+ L+ G Sbjct: 556 RVINDYENDYDLTTGNDSDITFKASRLKYWSEGELESREGNERKNHGVYLKWDESYSNSG 615 Query: 553 YYRIRLKNSIXXXXXXXXXXXXTFSMANRNADSKETPDAVQAAASPDVEVELKDGNHAAA 612 Y++ L + TFS A + + V+ AA D V LK N +A Sbjct: 616 LYQLTLPDGYFQKAGINEADSLTFSAA--------SIEEVEEAA--DFTVRLKMNNGQSA 665 Query: 613 RLPLKEVMDILPLPQTRFTLLPWLEERMSDGKYGDLSEAVFQTYELPFERFIEVEPGLDP 672 + L E + + P + T W ++ +YG+ E V QT+ +P +F GLD Sbjct: 666 EVSLSETLPLAPALHIQHT-KTWFYQK---SRYGNTHEPVLQTFHIPIAKF--TAQGLDI 719 Query: 673 DKLSEITFYL-QGEGDKIMLDDISFYLKGI 701 +++++I F + + KI LD+I LK I Sbjct: 720 NRVNKIEFVFDKTDQGKIFLDEIGV-LKAI 748 >A8VZ00.1 A8VZ00_9BACI Putative uncharacterized protein Length = 756 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 216/562 (38%), Positives = 325/562 (57%), Gaps = 13/562 (2%) Query: 143 DAENPGEPGNYTYRSFTYGSGQDLHRSEYGDEAELTTATVDASAYITSWPKLRTLFWGFD 202 D ++P G Y +FTYG G D+HR+E+ + ++ TA+VD S YI W + RT FWGFD Sbjct: 199 DLDDPLNSGVYGIETFTYGPGGDVHRTEFRHQMDVVTASVDGSHYIDDWSRGRTFFWGFD 258 Query: 203 HSSLPVNARVWMPDGEG--PYPLVLMVHGNHMMEDYSEGGYAYLGEQLASRGFIAVSLDE 260 S LP+N RVW+PD + +P+VLMVHGNH ME +S+ GY YLGE LAS+G+IAVS+D+ Sbjct: 259 ESELPLNGRVWLPDSDAGEKHPVVLMVHGNHRMEHFSDDGYTYLGETLASKGYIAVSVDQ 318 Query: 261 NFLNYSAWSGIPDNDFKVRTWMILKHLQQIGIFAEQSGNPFYQKVDYSRTALLGHSRGGQ 320 NFLN+S ++GIP ++ +R W++++HL + E+S + ++K+D +L+GHSRGGQ Sbjct: 319 NFLNFSGYTGIPSENYTLRPWILMQHLLEFKRHQEESKDNAFKKMDLDSVSLIGHSRGGQ 378 Query: 321 AVAMAADAGRWFKNDPALAAAAQFHIASVIALAPTDKAIDNQQARLEDVNYLTLQGARDG 380 AV+M AD R+F +D ++ + + +VIA+APTD+ +++Q+ RLE V+YLTL GA DG Sbjct: 379 AVSMVADYERFFADDDTVSGMEKIGLDAVIAIAPTDRQVNDQRPRLEGVHYLTLHGAHDG 438 Query: 381 DVHDFYGDRQYIRSSFTGAASS-FKSSLYIADANHSQFNTSWGLYDQSLPAGLFLDRTDI 439 DVH+F GDRQ++R++ A +K+S+Y + NHSQFN WG D SLP G+F++R + Sbjct: 439 DVHNFRGDRQFMRTNVDSAEEVLYKASVYFTEGNHSQFNEDWGRSDLSLPGGVFMNRRHL 498 Query: 440 MDGDAQRQITKVYVTAFLEATLDGKEVYQDLFRDYRSGLQWLPGTAYYNRFQSGGNIVVA 499 M D QR T +++ AFL+ T+ G+ + +F+D + WLP + + RF S + + Sbjct: 499 MSPDDQRDATALFIAAFLDLTVGGQADLELMFKD-PGTVPWLPDSGFLTRFDSSESETLV 557 Query: 500 TFDEDRNKNTVT-GGTAEAAGLAWREEV--AKDRESKSKATYGLVLEHSTKGGGEGYYRI 556 FD + + GG +E G + EV A+DR +KAT GLV+ G +R Sbjct: 558 AFDAGSDAASFRDGGESEFKGF-YETEVRNAEDRMRNTKATRGLVMGSRDNGS----WRA 612 Query: 557 RLKNSIXXXXXXXXXXXXTFSMANRNADSKETP-DAVQAAASPDVEVELKDGNHAAARLP 615 L + I S+AN + +E D SP + V L N + Sbjct: 613 ILSSRIKERVEEKDGGSIGISLANLGFELEEDGLDHWPWNTSPVIAVSLGLSNGERLTVR 672 Query: 616 LKEVMDILPLPQTRFTLLPWLEERMSDGKYGDLSEAVFQTYELPFERFIEVEPGLDPDKL 675 + + P T+++ P L+E M KY +E VF Y +P +RF E L Sbjct: 673 SDQFHHVYPPVFTQYSRYPGLDESMRGDKYSQPAEGVFHVYHVPIDRFQEQSDHFTLSAL 732 Query: 676 SEITFYLQGEGDKIMLDDISFY 697 + + KIM+D I +Y Sbjct: 733 ESLEIEVVDGPAKIMIDWIKWY 754 >A2TV12.1 A2TV12_9FLAO Putative secreted protein Length = 827 Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 179/426 (42%), Positives = 259/426 (60%), Gaps = 23/426 (5%) Query: 132 ASVSNGGPAPIDAENPGEPGNYTYRSFTYGSGQDLHRSEYGDEAELTTATVDASAYITSW 191 A++ I+A +P G+YT + TYGSG+D HR E+G + TT V ++ +W Sbjct: 209 AALHKSAVQKIEAPSPAARGDYTVKKITYGSGKDKHRPEFGKDVTFTTKPVSGVPFLDNW 268 Query: 192 PKL----RTLFWGFDHSSLPVNARVWMPDGEGPYPLVLMVHGNHMMEDYSEGGYAYLGEQ 247 L R FWGFD LP+N VW P+GEGP+ L L+VHGNH+M D+S+ GY YLGE Sbjct: 269 EGLSGWYREHFWGFDDKELPLNGYVWYPEGEGPFLLALIVHGNHLMSDFSDVGYEYLGEL 328 Query: 248 LASRGFIAVSLDENFLNYSAWSGIP---DNDFKVRTWMILKHLQQIGIFAEQSGNPFYQK 304 LASRG I VS+D+NFLN +W+ + D + R WM+L+HL+ + + +PFYQK Sbjct: 329 LASRGIITVSVDQNFLN-GSWADVTGGLDEENDARGWMLLEHLRVWHEWNKTEDHPFYQK 387 Query: 305 VDYSRTALLGHSRGGQAVAMAA--DAGRWFKNDPALAAAAQFHIASVIALAPTDKAID-- 360 +D + AL+GHSRGG+AV AA + ++ +D ++ F+I S++A+AP D Sbjct: 388 IDTTSIALMGHSRGGEAVGHAAFMNTLPYYADDASIPLDYNFNIKSIVAIAPVDGQYQPG 447 Query: 361 NQQARLEDVNYLTLQGARDGDVHDFYGDRQYIRSSFTGAASSFKSSLYIADANHSQFNTS 420 N L+DV+YLT+ G++DGDV F G +QY R +F+ + S FKS++Y+ ANH QFNTS Sbjct: 448 NAPNELKDVSYLTIHGSQDGDVTSFAGSKQYERITFSDSTSHFKSAVYVQGANHGQFNTS 507 Query: 421 WGLYDQSLPAGLFLDRTDIMDGDAQRQITKVYVTAFLEATLDGKEVYQDLFRDYRSGLQW 480 WG D S + FL+ ++ G+ QR+I +VY++AFLE TL K Y+ LF D R+G W Sbjct: 508 WGENDTSDASTYFLNNKQLLSGEEQREIARVYISAFLETTLTDKMSYKPLFADARTGADW 567 Query: 481 LPGTAYYNRFQSGGNIVVATFDEDRNKNTVTGGTAEAAGL------AWREEVAKDR--ES 532 LP T Y ++++ +AT+DED N VT GT ++ + WRE+ + E Sbjct: 568 LPETIYLSQYEDSSFTPLATYDEDFN---VTTGTKDSTTIKSTNVTVWREQEISLKWGEK 624 Query: 533 KSKATY 538 S+A Y Sbjct: 625 GSRAAY 630 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,002,300,954 Number of extensions: 170176453 Number of successful extensions: 396938 Number of sequences better than 1.0e-05: 37 Number of HSP's gapped: 396889 Number of HSP's successfully gapped: 37 Length of query: 713 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 570 Effective length of database: 1,713,491,058 Effective search space: 976689903060 Effective search space used: 976689903060 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 135 (56.6 bits)