BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0147.0009.p (258 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DIZ0.1 B1DIZ0_9BACL Sulfate ABC transporter, inner membrane su... 364 5e-99 C5CNV2.1 C5CNV2_VARPD Sulfate ABC transporter, inner membrane su... 352 2e-95 A2SBZ8.1 A2SBZ8_METPP ABC type transporter 348 3e-94 A9C3A6.1 A9C3A6_DELAS Sulfate ABC transporter, inner membrane su... 345 2e-93 Q2YBQ9.1 Q2YBQ9_NITMU Sulfate ABC transporter, permease protein ... 345 2e-93 >B1DIZ0.1 B1DIZ0_9BACL Sulfate ABC transporter, inner membrane subunit CysW Length = 294 Score = 364 bits (934), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 180/259 (69%), Positives = 208/259 (80%), Gaps = 3/259 (1%) Query: 2 LVAAAGLVLFWLIALPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLNT 61 L++ A L L +A+PL+ V EA K+G+DV+ AA+TDPDA SALRLTLLVA I VPLN Sbjct: 30 LISIAVLFLGLAVAMPLVSVFIEAFKKGFDVYKAAITDPDALSALRLTLLVALIAVPLNA 89 Query: 62 VFGVMAAWAVTKFRFRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDIK 121 VFG+ AAWA++KFRF+GK FLITLIDLPFAVSPVI GLI++L+FG+ G+ G WL HDIK Sbjct: 90 VFGIAAAWAISKFRFKGKNFLITLIDLPFAVSPVISGLIYILMFGAQGFLGPWLDEHDIK 149 Query: 122 IVFALPGIMLATLFVTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKW 181 IVFALPGI+LAT+FVT PFVARELIPLM+ QG QEEEAA +LGA GWQIFWR+TLPNIKW Sbjct: 150 IVFALPGIVLATIFVTVPFVARELIPLMQAQGVQEEEAAASLGAKGWQIFWRITLPNIKW 209 Query: 182 GLLYGIILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYQXXXXXXXXXXXXXX 241 GLLYGIIL NARAMGEFGAVSVVSGHIRGETNTLPLH+EILYNEYQ Sbjct: 210 GLLYGIILSNARAMGEFGAVSVVSGHIRGETNTLPLHIEILYNEYQFSASFAVASLLVML 269 Query: 242 XXXTMIVKS---WLTRKNA 257 T++VK+ W T +NA Sbjct: 270 AVLTLLVKALFEWKTNQNA 288 >C5CNV2.1 C5CNV2_VARPD Sulfate ABC transporter, inner membrane subunit CysW Length = 297 Score = 352 bits (903), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 168/250 (67%), Positives = 199/250 (79%) Query: 1 VLVAAAGLVLFWLIALPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLN 60 +L+ A +F + LPL V TEAL++G D +L AL +PDA SA+RLTL+ AAI VPLN Sbjct: 24 LLIGVALAFMFLFLVLPLAAVATEALRKGLDAYLEALKEPDAWSAIRLTLITAAIAVPLN 83 Query: 61 TVFGVMAAWAVTKFRFRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDI 120 VFGV AAWA+ KF FRGK FL TL+DLPFAVSPV+ GLI+VLVFG+ GW G WL+ HDI Sbjct: 84 LVFGVAAAWAIAKFEFRGKAFLTTLVDLPFAVSPVVAGLIYVLVFGAQGWLGPWLAEHDI 143 Query: 121 KIVFALPGIMLATLFVTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIK 180 KI+FA+PGI+LAT+FVTFPF+AREL+PLM+ QGT EE+AAI LGA GWQ FWRVTLPNIK Sbjct: 144 KIIFAVPGIVLATVFVTFPFIARELVPLMQAQGTDEEQAAIVLGATGWQTFWRVTLPNIK 203 Query: 181 WGLLYGIILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYQXXXXXXXXXXXXX 240 WGLLYG+ILCNARAMGEFGAVSVVSGHIRG+TNT+PLHVE+LYNEYQ Sbjct: 204 WGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTMPLHVEVLYNEYQSVAAFAVASLLAI 263 Query: 241 XXXXTMIVKS 250 T+++KS Sbjct: 264 LALVTLVIKS 273 >A2SBZ8.1 A2SBZ8_METPP ABC type transporter Length = 304 Score = 348 bits (892), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 163/240 (67%), Positives = 193/240 (80%) Query: 16 LPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLNTVFGVMAAWAVTKFR 75 +PL V EALK+GWDV+LAA+ +PDA SA+RLTLL AA+++PLN VFGV AAW + KF Sbjct: 51 VPLFAVFYEALKKGWDVYLAAIVEPDALSAIRLTLLAAAVSLPLNLVFGVAAAWCIAKFN 110 Query: 76 FRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDIKIVFALPGIMLATLF 135 FRGK L+TLIDLPF+VSPVI GLIFVLVFG GW G WL HD+KI+FALPGI+LAT+F Sbjct: 111 FRGKNILLTLIDLPFSVSPVIAGLIFVLVFGLQGWLGGWLREHDLKIIFALPGIVLATVF 170 Query: 136 VTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKWGLLYGIILCNARAM 195 +TFPF+ARELIPLM+ QG ++EEAA LGA GWQIFWRVTLPNIKW LLYG+ILCNARAM Sbjct: 171 ITFPFIARELIPLMQAQGVEQEEAARVLGASGWQIFWRVTLPNIKWALLYGVILCNARAM 230 Query: 196 GEFGAVSVVSGHIRGETNTLPLHVEILYNEYQXXXXXXXXXXXXXXXXXTMIVKSWLTRK 255 GEFGAVSVVSGHIRG+TNT+PLH+EILYNEYQ T+++K + R+ Sbjct: 231 GEFGAVSVVSGHIRGQTNTMPLHIEILYNEYQFAASFAVASLLAGLALVTLVLKYLVERR 290 >A9C3A6.1 A9C3A6_DELAS Sulfate ABC transporter, inner membrane subunit CysW Length = 335 Score = 345 bits (886), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 158/214 (73%), Positives = 189/214 (88%) Query: 14 IALPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLNTVFGVMAAWAVTK 73 + LPL V TEAL++GWD ++A L +PDA SA++LTL+ A I VP+N VFGV AAW + K Sbjct: 62 LVLPLAAVFTEALRKGWDAYVAGLQEPDAWSAIKLTLITALIAVPVNLVFGVAAAWCIAK 121 Query: 74 FRFRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDIKIVFALPGIMLAT 133 F FRGK FLITLIDLPF++SPV+ GL++VLVFG++GWFG WL+ HDIKI+FA+PGI+LAT Sbjct: 122 FEFRGKAFLITLIDLPFSISPVVAGLMYVLVFGAHGWFGPWLAEHDIKIIFAVPGIVLAT 181 Query: 134 LFVTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKWGLLYGIILCNAR 193 +FVTFPF+ARELIPLM+ QG+ EE+AAI LGA GWQ FW+VTLPNIKWGLLYG+ILCNAR Sbjct: 182 IFVTFPFIARELIPLMQAQGSDEEQAAIVLGATGWQTFWKVTLPNIKWGLLYGVILCNAR 241 Query: 194 AMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYQ 227 AMGEFGAVSVVSGHIRG+TNT+PLHVEILYNEYQ Sbjct: 242 AMGEFGAVSVVSGHIRGQTNTIPLHVEILYNEYQ 275 >Q2YBQ9.1 Q2YBQ9_NITMU Sulfate ABC transporter, permease protein CysW Length = 293 Score = 345 bits (885), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 161/212 (75%), Positives = 187/212 (88%) Query: 16 LPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLNTVFGVMAAWAVTKFR 75 +PLI V EALK+GWDV++AA+T+PDA SA++LTL AAI VPLN VFG+ AAWAV KF Sbjct: 42 VPLISVFYEALKKGWDVYIAAITEPDAVSAIQLTLTAAAIAVPLNLVFGIAAAWAVAKFE 101 Query: 76 FRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDIKIVFALPGIMLATLF 135 FRGK L+TLIDLPF+VSPV+ GLI+VL+FG GW G WL+ HDIKI+FA+PGI+LAT+F Sbjct: 102 FRGKNLLVTLIDLPFSVSPVVSGLIYVLIFGLQGWLGPWLAEHDIKIIFAVPGIVLATIF 161 Query: 136 VTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKWGLLYGIILCNARAM 195 VT PF+ARELIPLM+ QG +EEEAA+ LGA+GWQIF+RVTLPNIKWGLLYG+ILCNARAM Sbjct: 162 VTVPFIARELIPLMQSQGAEEEEAAVVLGANGWQIFFRVTLPNIKWGLLYGVILCNARAM 221 Query: 196 GEFGAVSVVSGHIRGETNTLPLHVEILYNEYQ 227 GEFGAVSVVSGHIRG TNTLPLHVEILYNEY Sbjct: 222 GEFGAVSVVSGHIRGSTNTLPLHVEILYNEYN 253 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.328 0.142 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,431,504,427 Number of extensions: 57252937 Number of successful extensions: 233101 Number of sequences better than 1.0e-05: 5559 Number of HSP's gapped: 233771 Number of HSP's successfully gapped: 5608 Length of query: 258 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 125 Effective length of database: 1,807,701,208 Effective search space: 225962651000 Effective search space used: 225962651000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 130 (54.7 bits)