BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0145.0002.p
         (443 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A4Z3C8.1 A4Z3C8_BRASO Putative uncharacterized protein                363   1e-98
Q07TG4.1 Q07TG4_RHOP5 Putative uncharacterized protein                348   5e-94

>A4Z3C8.1 A4Z3C8_BRASO Putative uncharacterized protein
          Length = 415

 Score =  363 bits (933), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 192/411 (46%), Positives = 259/411 (63%), Gaps = 12/411 (2%)

Query: 35  AIGAIMGGGNF-TNGSTTQMNCFQALNTIGIGMTRVNLYPQYYYADNAPTPERLDSMMLQ 93
           AI   +GGGN  T+ +      +QAL+ +G GM R++ Y     A   PTP   D+ ML+
Sbjct: 5   AIRDRIGGGNLVTHLAGRSAQLYQALHGVGAGMGRMDSYGWRTLA-RVPTPHDFDAAMLE 63

Query: 94  SYQHGITPMILFEYYGSYE--KNGQLLGNYDKWYSIGQAFADRFRPNGKWAQANGIQNWG 151
           ++Q+GITP+IL EY GSY+     Q +G+Y  W++ G+A A RFRP G W Q NGI +WG
Sbjct: 64  AHQNGITPVILLEYEGSYQTLDPPQPIGSYQDWFAAGKAMAQRFRPGGDWGQENGIPDWG 123

Query: 152 VTIYTALNEPDVENLISKTDYHNALEGLADGVHSVDKSLKVNPGGFAKANSNSDYTLGGY 211
            TI+TA+NEPDV+  I   DYH+AL GLADGVHSVD  L+V PGGFA  NS+ D TL GY
Sbjct: 124 ATIFTAINEPDVQATIPHRDYHDALAGLADGVHSVDSELRVVPGGFATCNSHGDATLRGY 183

Query: 212 GPAIADLYNSGKLDGIDLHTYYDIQYAPMKGTYKYSAQSNFDSVKRASGITADVNFYATE 271
           GPAIADL   G+LDGIDLHTYY+ ++ PM     +S Q+ FD +K+A G+T +V FY+TE
Sbjct: 184 GPAIADLLADGRLDGIDLHTYYNDRWYPMSRGRAFSVQTCFDRIKQAMGLTREVKFYSTE 243

Query: 272 FNFKK--RLITEEEAAKGFFTAIWDNLGVVKNDGKTPATQFAFPWSLFNSATTDTF-YGL 328
           FN  +     +EE  AK F +AIWD L VV  DG+TP +  AFPW+L ++   D   Y +
Sbjct: 244 FNVARAGAWESEETTAKLFLSAIWDQLAVVGTDGRTPVSVIAFPWNLGDTPDVDGLAYAM 303

Query: 329 SSSPDSWVPVTRGKTLENVIEKTKGMSFVSLDPKKTGEYVLNGSRKKLWVWQNLDYWTNH 388
           +S  D WVP  R   L+ V++    M  VS+D ++   Y L+G+   L VWQN+  WT+ 
Sbjct: 304 ASGKDPWVPEARSAVLKTVLQLAGHMKIVSID-RRLALYTLSGADADLIVWQNIAGWTDR 362

Query: 389 PGTSYTINGLPNGTYKLEVIGWNGVRQTI-AISGKTSYTINNLAVGETYMF 438
           PG +  I  LP     +EV GWNG+++ I A  G+    ++ L+  ETYMF
Sbjct: 363 PGRAVEIE-LPAWARSVEVWGWNGLQRRIDAAPGR--LFVDGLSGNETYMF 410


>Q07TG4.1 Q07TG4_RHOP5 Putative uncharacterized protein
          Length = 438

 Score =  348 bits (894), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 181/428 (42%), Positives = 258/428 (60%), Gaps = 10/428 (2%)

Query: 18  LITLFSGQNAFGSASNQAIGAIMGGGNFTN--GSTTQMNCFQALNTIGIGMTRVNLYPQY 75
           L+ +    +A  + +N  +   +GGGN             + AL  +G    R++ Y  +
Sbjct: 7   LLPVVRAASADTAVANARLRDRIGGGNIVTHLAGAPSKQIYAALRGVGATSGRMDSY-GW 65

Query: 76  YYADNAPTPERLDSMMLQSYQHGITPMILFEYYGSYE--KNGQLLGNYDKWYSIGQAFAD 133
                 PTP   D+ M +++ +GITP+IL EY GSY+  +  QL+G+YD W++ GQA+A 
Sbjct: 66  RDLGRVPTPHDFDAAMREAHHNGITPIILLEYDGSYQSLQPPQLVGSYDDWFAAGQAYAR 125

Query: 134 RFRPNGKWAQANGIQNWGVTIYTALNEPDVENLISKTDYHNALEGLADGVHSVDKSLKVN 193
           RFRP+G+W   NGI  WGV+++TA+NEPDV+  I +  Y +AL GLADGVHS+D +L+V 
Sbjct: 126 RFRPDGEWGLENGISGWGVSVFTAINEPDVQASIPREAYRDALAGLADGVHSIDAALRVV 185

Query: 194 PGGFAKANSNSDYTLGGYGPAIADLYNSGKLDGIDLHTYYDIQYAPMKGTYKYSAQSNFD 253
           PGGFA  NS  D TL GYGPAIA L   G+LDGIDLHTYY+ ++ P+    ++S Q+ FD
Sbjct: 186 PGGFATCNSAGDATLRGYGPAIAGLLEDGRLDGIDLHTYYNARWYPITRGREFSVQTCFD 245

Query: 254 SVKRASGITADVNFYATEFNFKK--RLITEEEAAKGFFTAIWDNLGVVKNDGKTPATQFA 311
            VK+A G+  +VNFYATEFN  +       + AA+ F TA WD +GVV+ DG+T A   A
Sbjct: 246 RVKQAMGLRREVNFYATEFNVARDGEWQDPKLAARLFLTAFWDQVGVVRGDGRTSALALA 305

Query: 312 FPWSLFNSATTD-TFYGLSSSPDSWVPVTRGKTLENVIEKTKGMSFVSLDPKKTGEYVLN 370
           FPW+L ++   +   Y +++S   W P  R K L  V++    M+  SLDP + G  +L 
Sbjct: 306 FPWNLADTGRIEGPAYAMAASESPWKPDPRAKVLRTVLDLAGDMALKSLDP-RAGLTLLE 364

Query: 371 GSRKKLWVWQNLDYWTNHPGTSYTINGLPNGTYKLEVIGWNGVRQTIAISGKTSYTINNL 430
           G   +L VWQNL  WT+ PG +  +  LP+    LEV  WNG+R+ I++ G  S TI +L
Sbjct: 365 GDSGQLIVWQNLPGWTDRPGPALQLT-LPDWARTLEVWAWNGLRRRISVRGGGSLTIGDL 423

Query: 431 AVGETYMF 438
              +T M 
Sbjct: 424 DENQTTMI 431


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.316    0.133    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 2,890,542,062
Number of extensions: 132480169
Number of successful extensions: 299213
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 299202
Number of HSP's successfully gapped: 2
Length of query: 443
Length of database: 3,060,696,203
Length adjustment: 139
Effective length of query: 304
Effective length of database: 1,751,175,118
Effective search space: 532357235872
Effective search space used: 532357235872
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 133 (55.8 bits)