BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0137.0016.p
         (138 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KK40.1 B3KK40_9BACI Putative uncharacterized protein                196   4e-49
B1DM85.1 B1DM85_9BACL Putative uncharacterized protein                186   7e-46
C0ZC00.1 C0ZC00_BREBN Putative uncharacterized protein yqhY           134   2e-30
B0TEI4.1 B0TEI4_HELMI Putative uncharacterized protein                130   5e-29
A1HQ70.1 A1HQ70_9FIRM Putative uncharacterized protein                128   2e-28

>B3KK40.1 B3KK40_9BACI Putative uncharacterized protein
          Length = 137

 Score =  196 bits (499), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 104/136 (76%), Positives = 111/136 (81%), Gaps = 2/136 (1%)

Query: 3   TLPTEYERTEIGEIQIAPEVIEVIAGLATVEVKXXXXXXXXXXXXIVELLGRKNLSKGVK 62
           TLPTE+ERT+IGEIQIAPEVIEVIAGLATVEV+            I ELLGRKNLSKGVK
Sbjct: 4   TLPTEFERTDIGEIQIAPEVIEVIAGLATVEVRGVAGMSGGFAGGIAELLGRKNLSKGVK 63

Query: 63  VEVGQREAAVDVSVIIEYGNRLPEVAAEIQRNVKRSIETMTGLTVVEVNVHIHDVQFRSN 122
           VEVGQREAAVDVSVI+EYG+RLPEVA EIQRNVKRSIE MTGLTV+EVNVHIHDV F   
Sbjct: 64  VEVGQREAAVDVSVIVEYGHRLPEVAGEIQRNVKRSIENMTGLTVIEVNVHIHDVHFM-- 121

Query: 123 NTAEKTEETDAVLRVK 138
            + EKTEE D   RVK
Sbjct: 122 KSVEKTEELDLAQRVK 137


>B1DM85.1 B1DM85_9BACL Putative uncharacterized protein
          Length = 135

 Score =  186 bits (471), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 96/138 (69%), Positives = 109/138 (78%), Gaps = 3/138 (2%)

Query: 1   MSTLPTEYERTEIGEIQIAPEVIEVIAGLATVEVKXXXXXXXXXXXXIVELLGRKNLSKG 60
           MST+  +YERT+IG IQIAPEVIEVIAGLA VEVK            I ELLGRKNLSKG
Sbjct: 1   MSTIAADYERTDIGTIQIAPEVIEVIAGLAAVEVKGVAGMSGGFAGGIAELLGRKNLSKG 60

Query: 61  VKVEVGQREAAVDVSVIIEYGNRLPEVAAEIQRNVKRSIETMTGLTVVEVNVHIHDVQFR 120
           VKVEVGQREAAVDVS+I+EYGNR+PE+A+EIQ NVKRSIE MTGL V+EVNVHIHDV F+
Sbjct: 61  VKVEVGQREAAVDVSIIVEYGNRIPEIASEIQLNVKRSIEMMTGLNVIEVNVHIHDVHFK 120

Query: 121 SNNTAEKTEETDAVLRVK 138
           + +   K EE D+  RVK
Sbjct: 121 AES---KPEEEDSNFRVK 135


>C0ZC00.1 C0ZC00_BREBN Putative uncharacterized protein yqhY
          Length = 138

 Score =  134 bits (337), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 92/121 (76%)

Query: 1   MSTLPTEYERTEIGEIQIAPEVIEVIAGLATVEVKXXXXXXXXXXXXIVELLGRKNLSKG 60
           M     + +RTE+G++QIAPEV+EVIAG+A  EV+            I E LGRKN+++G
Sbjct: 1   MEEFTPDLDRTELGKVQIAPEVLEVIAGMAASEVEGVAQMSGGFVGEIAERLGRKNIARG 60

Query: 61  VKVEVGQREAAVDVSVIIEYGNRLPEVAAEIQRNVKRSIETMTGLTVVEVNVHIHDVQFR 120
           V+VEVG REAAVDVS+I++YG+R+PEVA  IQ +V+ +IE+MTGL+VVEVNVHI DV+ +
Sbjct: 61  VRVEVGSREAAVDVSIIVKYGHRIPEVARNIQDSVRNAIESMTGLSVVEVNVHIVDVELK 120

Query: 121 S 121
           +
Sbjct: 121 A 121


>B0TEI4.1 B0TEI4_HELMI Putative uncharacterized protein
          Length = 132

 Score =  130 bits (326), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/117 (55%), Positives = 86/117 (73%)

Query: 10  RTEIGEIQIAPEVIEVIAGLATVEVKXXXXXXXXXXXXIVELLGRKNLSKGVKVEVGQRE 69
           + +IG ++IA EV+  IAGLA  EV+            I E+LGRKNL++GVKVEVG+RE
Sbjct: 11  KQDIGHVRIAQEVVATIAGLAATEVEGVAAMSGGLGGGIAEMLGRKNLTRGVKVEVGERE 70

Query: 70  AAVDVSVIIEYGNRLPEVAAEIQRNVKRSIETMTGLTVVEVNVHIHDVQFRSNNTAE 126
           AA+D+++I+ +G+R+PEVA  +Q NVKRSIE+MTGLTVVEVNVHI  V F +  T E
Sbjct: 71  AAIDMNIIVNFGSRIPEVAKRVQENVKRSIESMTGLTVVEVNVHIQGVNFPTPETKE 127


>A1HQ70.1 A1HQ70_9FIRM Putative uncharacterized protein
          Length = 134

 Score =  128 bits (321), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 82/111 (73%)

Query: 9   ERTEIGEIQIAPEVIEVIAGLATVEVKXXXXXXXXXXXXIVELLGRKNLSKGVKVEVGQR 68
           ER ++G I+IA EV+ +IAGLA  EV             I E+LG+KNLSKGVKVEVG+R
Sbjct: 12  ERNDVGSIRIADEVVGIIAGLAATEVPGVAGMSGGLVGGIAEMLGKKNLSKGVKVEVGER 71

Query: 69  EAAVDVSVIIEYGNRLPEVAAEIQRNVKRSIETMTGLTVVEVNVHIHDVQF 119
           EAAVD+ +I+EYG R+P+VA  +Q NVKR+IE+MTGL VVEVN+H+  V F
Sbjct: 72  EAAVDLYIIVEYGVRIPDVALRVQENVKRAIESMTGLDVVEVNIHVQGVGF 122


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.312    0.130    0.334 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 599,290,341
Number of extensions: 17404095
Number of successful extensions: 38742
Number of sequences better than 1.0e-05: 911
Number of HSP's gapped: 38399
Number of HSP's successfully gapped: 911
Length of query: 138
Length of database: 3,060,696,203
Length adjustment: 102
Effective length of query: 36
Effective length of database: 2,099,752,673
Effective search space: 75591096228
Effective search space used: 75591096228
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 125 (52.8 bits)