BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0137.0015.p (181 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KK39.1 B3KK39_9BACI Acetyl-CoA carboxylase, biotin carboxylase 328 1e-88 B1DM86.1 B1DM86_9BACL Acetyl-CoA carboxylase, biotin carboxylase 325 8e-88 C0ZD10.1 C0ZD10_BREBN Probable biotin carboxylase EC=6.3.4.14 295 1e-78 B7GHF6.1 B7GHF6_ANOFW Biotin carboxylase 286 8e-76 C5D475.1 C5D475_9BACI Acetyl-CoA carboxylase, biotin carboxylase 281 2e-74 >B3KK39.1 B3KK39_9BACI Acetyl-CoA carboxylase, biotin carboxylase Length = 447 Score = 328 bits (841), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 153/181 (84%), Positives = 168/181 (92%) Query: 1 VNYSGAGTLEFLLGPDGQFYFMEMNTRIQVEHPVTEMVTGVDLIKEMISVAEGNPLSFTQ 60 VNYSGAGTLEFLLG DGQFYFMEMNTRIQVEHPVTEMVTGVDLI+EMISVAEGN LSF+Q Sbjct: 267 VNYSGAGTLEFLLGQDGQFYFMEMNTRIQVEHPVTEMVTGVDLIQEMISVAEGNTLSFSQ 326 Query: 61 EDIKINGWSMECRINAEDPERNFMPSPGKIGFYLPPGGLGVRVDSAAYPGYTISPFYDSM 120 ED+ INGWS+ECRINAE+P++ FMP+PG I FYLPPGG GVRVDSAAYPGYTISP+YDSM Sbjct: 327 EDVVINGWSIECRINAENPDKGFMPAPGTIQFYLPPGGPGVRVDSAAYPGYTISPYYDSM 386 Query: 121 IAKLIVWAPTRREAIAKMKRALSEFAVEGIHTTISFHQKLLEHPVFLDGNFDIKFLEEYE 180 IAKLIVWAPTR EAIAKMKRAL+EF +EGI++TI FHQKLL+HP FL G+FDIKFLEE E Sbjct: 387 IAKLIVWAPTRDEAIAKMKRALAEFEIEGIYSTIPFHQKLLKHPTFLKGDFDIKFLEENE 446 Query: 181 I 181 I Sbjct: 447 I 447 >B1DM86.1 B1DM86_9BACL Acetyl-CoA carboxylase, biotin carboxylase Length = 454 Score = 325 bits (834), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 151/180 (83%), Positives = 163/180 (90%) Query: 2 NYSGAGTLEFLLGPDGQFYFMEMNTRIQVEHPVTEMVTGVDLIKEMISVAEGNPLSFTQE 61 Y+GAGTLEFLLGPDG FYFMEMNTRIQVEHPVTEM+T VDLIKEMISVAEGNPLSF QE Sbjct: 268 QYAGAGTLEFLLGPDGNFYFMEMNTRIQVEHPVTEMITNVDLIKEMISVAEGNPLSFKQE 327 Query: 62 DIKINGWSMECRINAEDPERNFMPSPGKIGFYLPPGGLGVRVDSAAYPGYTISPFYDSMI 121 D++INGW++ECRINAED ERNFMPSPG I FYLPPGG GVRVDSA YPGYTISP YDSMI Sbjct: 328 DLQINGWAIECRINAEDSERNFMPSPGLIPFYLPPGGTGVRVDSAVYPGYTISPHYDSMI 387 Query: 122 AKLIVWAPTRREAIAKMKRALSEFAVEGIHTTISFHQKLLEHPVFLDGNFDIKFLEEYEI 181 AKLIVW TR EAIA+MKRALSEFA++GI TTI FHQKLL HPVF+ GNFDIKFLEEY++ Sbjct: 388 AKLIVWGRTRDEAIARMKRALSEFAIDGIKTTIPFHQKLLNHPVFVKGNFDIKFLEEYDV 447 >C0ZD10.1 C0ZD10_BREBN Probable biotin carboxylase EC=6.3.4.14 Length = 448 Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 133/177 (75%), Positives = 153/177 (86%) Query: 2 NYSGAGTLEFLLGPDGQFYFMEMNTRIQVEHPVTEMVTGVDLIKEMISVAEGNPLSFTQE 61 +Y GAGT+EFLL GQFYFMEMNTRIQVEHPVTEM+TG+DLIKE ISVA GNPLSF+QE Sbjct: 267 SYHGAGTVEFLLDKHGQFYFMEMNTRIQVEHPVTEMITGIDLIKEQISVAVGNPLSFSQE 326 Query: 62 DIKINGWSMECRINAEDPERNFMPSPGKIGFYLPPGGLGVRVDSAAYPGYTISPFYDSMI 121 D+KINGW++ECRINAE+P +NFMPSPGK+ YLPPGG GVRVDSA YPGY ISPFYDSM+ Sbjct: 327 DVKINGWAIECRINAENPAKNFMPSPGKVVNYLPPGGYGVRVDSAVYPGYEISPFYDSMV 386 Query: 122 AKLIVWAPTRREAIAKMKRALSEFAVEGIHTTISFHQKLLEHPVFLDGNFDIKFLEE 178 AKLIVW R EA+A+MKRAL EF +EG+HTT+ FH+KLLEHP F+ GNF FLE+ Sbjct: 387 AKLIVWGTDRNEALARMKRALGEFVIEGVHTTVPFHEKLLEHPDFVAGNFATNFLEK 443 >B7GHF6.1 B7GHF6_ANOFW Biotin carboxylase Length = 450 Score = 286 bits (731), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 134/180 (74%), Positives = 152/180 (84%), Gaps = 1/180 (0%) Query: 3 YSGAGTLEFLLG-PDGQFYFMEMNTRIQVEHPVTEMVTGVDLIKEMISVAEGNPLSFTQE 61 Y+GAGT+EF+ + QFYFMEMNTRIQVEHPVTEMVTGVDLIKE I VA G L+ QE Sbjct: 268 YTGAGTVEFIYDYRNRQFYFMEMNTRIQVEHPVTEMVTGVDLIKEQIRVASGEKLTLKQE 327 Query: 62 DIKINGWSMECRINAEDPERNFMPSPGKIGFYLPPGGLGVRVDSAAYPGYTISPFYDSMI 121 D+K NGWS+ECRINAE+P +NFMPS GKI YLPPGG GVRVDSAAYPGYTI P+YDSMI Sbjct: 328 DVKFNGWSIECRINAENPAKNFMPSAGKIQMYLPPGGFGVRVDSAAYPGYTIPPYYDSMI 387 Query: 122 AKLIVWAPTRREAIAKMKRALSEFAVEGIHTTISFHQKLLEHPVFLDGNFDIKFLEEYEI 181 AKLIV APTR EAIA+MKRALSEF +EG+HTTI FH KLLEH F++GNF+ KFLE Y++ Sbjct: 388 AKLIVHAPTREEAIARMKRALSEFVIEGVHTTIPFHLKLLEHEKFVEGNFNTKFLETYDV 447 >C5D475.1 C5D475_9BACI Acetyl-CoA carboxylase, biotin carboxylase Length = 450 Score = 281 bits (718), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 131/181 (72%), Positives = 153/181 (84%), Gaps = 1/181 (0%) Query: 2 NYSGAGTLEFLLG-PDGQFYFMEMNTRIQVEHPVTEMVTGVDLIKEMISVAEGNPLSFTQ 60 NY+GAGT+EF+ + +FYFMEMNTRIQVEHPVTE++TGVDLIKE I +A G LS TQ Sbjct: 267 NYTGAGTVEFIYDHNEKKFYFMEMNTRIQVEHPVTELITGVDLIKEQIRIASGEKLSLTQ 326 Query: 61 EDIKINGWSMECRINAEDPERNFMPSPGKIGFYLPPGGLGVRVDSAAYPGYTISPFYDSM 120 +++ NGW++ECRINAE+PE+NFMPSPGKI YLPPGGLGVRVDSAAYPGYTI P+YDSM Sbjct: 327 DEVTFNGWAIECRINAENPEKNFMPSPGKINMYLPPGGLGVRVDSAAYPGYTIPPYYDSM 386 Query: 121 IAKLIVWAPTRREAIAKMKRALSEFAVEGIHTTISFHQKLLEHPVFLDGNFDIKFLEEYE 180 IAKLIV APTR EAIA+MKRALSEF ++GIHTTI FH KL EH F+ G F+ KFLE Y+ Sbjct: 387 IAKLIVHAPTREEAIARMKRALSEFIIDGIHTTIPFHIKLFEHEKFVKGEFNTKFLELYD 446 Query: 181 I 181 I Sbjct: 447 I 447 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.139 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,156,126,517 Number of extensions: 46138173 Number of successful extensions: 100916 Number of sequences better than 1.0e-05: 3937 Number of HSP's gapped: 95284 Number of HSP's successfully gapped: 3943 Length of query: 181 Length of database: 3,060,696,203 Length adjustment: 127 Effective length of query: 54 Effective length of database: 1,864,227,298 Effective search space: 100668274092 Effective search space used: 100668274092 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)