BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0137.0014.p (274 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KK39.1 B3KK39_9BACI Acetyl-CoA carboxylase, biotin carboxylase 449 e-124 B1DM86.1 B1DM86_9BACL Acetyl-CoA carboxylase, biotin carboxylase 424 e-117 B7GHF6.1 B7GHF6_ANOFW Biotin carboxylase 374 e-102 C5D475.1 C5D475_9BACI Acetyl-CoA carboxylase, biotin carboxylase 372 e-101 A6CNF7.1 A6CNF7_9BACI Acetyl-CoA carboxylase EC=6.4.1.2 370 e-101 >B3KK39.1 B3KK39_9BACI Acetyl-CoA carboxylase, biotin carboxylase Length = 447 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 222/249 (89%), Positives = 236/249 (94%) Query: 1 MNIQKVLIANRGEIAVRIIRACRELGISTVAVYSEPDRDSLHVRLADEAYCIGPMPSKDS 60 M QKVLIANRGEIAVRIIRACRELGI+TVAVYSEPDR+SLHVRLADEAYCIGP SKDS Sbjct: 1 MTFQKVLIANRGEIAVRIIRACRELGIATVAVYSEPDRESLHVRLADEAYCIGPTLSKDS 60 Query: 61 YLNFTNIMSVATLTECDAVHPGYGFLAENADFAEICESCNITFIGPSPEAITRMGDKAVA 120 YLNFTNIMSVATLTECDA+HPGYGFLAENADFAEICESCNITFIGPS +AI RMGDKAVA Sbjct: 61 YLNFTNIMSVATLTECDAIHPGYGFLAENADFAEICESCNITFIGPSADAINRMGDKAVA 120 Query: 121 KETMKRAGVPIIPGSDGLVGDVEEAVMLGRDIGYPIIVKATAGGGGKGIRIAEDEESLVK 180 K+TMK AGVP+IPGSDGLV D++EAVML RDIGYP+I+KATAGGGGKGIRIAEDEESL+K Sbjct: 121 KQTMKDAGVPVIPGSDGLVEDLDEAVMLARDIGYPVIIKATAGGGGKGIRIAEDEESLIK 180 Query: 181 QITAAQQEAQKAFGNAGVYLEKFLTGMKHVEIQIIADNHGNVVHLGERDCSVQRRRQKLI 240 QIT AQQEAQKAFGNAGVYLEK+LTGMKHVEIQIIAD HGN VHLGERDCSVQRRRQKL+ Sbjct: 181 QITNAQQEAQKAFGNAGVYLEKYLTGMKHVEIQIIADKHGNAVHLGERDCSVQRRRQKLV 240 Query: 241 EEAPCSVLT 249 EEAPC VL+ Sbjct: 241 EEAPCPVLS 249 >B1DM86.1 B1DM86_9BACL Acetyl-CoA carboxylase, biotin carboxylase Length = 454 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 211/250 (84%), Positives = 228/250 (91%) Query: 1 MNIQKVLIANRGEIAVRIIRACRELGISTVAVYSEPDRDSLHVRLADEAYCIGPMPSKDS 60 M QKVLIANRGEIAVRIIRACRELGISTVAVYSE DRDSLHVRLADEAYCIGP SKDS Sbjct: 1 MKFQKVLIANRGEIAVRIIRACRELGISTVAVYSEADRDSLHVRLADEAYCIGPTASKDS 60 Query: 61 YLNFTNIMSVATLTECDAVHPGYGFLAENADFAEICESCNITFIGPSPEAITRMGDKAVA 120 YLN TN+MSVAT+T CDAVHPGYGFL+ENADFAEICESCNI FIGPSPEAI++MGDKAVA Sbjct: 61 YLNLTNLMSVATITGCDAVHPGYGFLSENADFAEICESCNIAFIGPSPEAISKMGDKAVA 120 Query: 121 KETMKRAGVPIIPGSDGLVGDVEEAVMLGRDIGYPIIVKATAGGGGKGIRIAEDEESLVK 180 K+TMK A VP+IPGSDGLV +++EAV + IGYP+I+KATAGGGGKGIRIAEDEESLV+ Sbjct: 121 KQTMKEADVPVIPGSDGLVENMDEAVRVASSIGYPVIIKATAGGGGKGIRIAEDEESLVQ 180 Query: 181 QITAAQQEAQKAFGNAGVYLEKFLTGMKHVEIQIIADNHGNVVHLGERDCSVQRRRQKLI 240 QIT AQQEA K FGNAGVYLEK+LTGMKHVEIQI+AD HGN VHL ERDCSVQRRRQKL+ Sbjct: 181 QITTAQQEALKNFGNAGVYLEKYLTGMKHVEIQIMADKHGNAVHLFERDCSVQRRRQKLV 240 Query: 241 EEAPCSVLTP 250 EEAPC VLTP Sbjct: 241 EEAPCPVLTP 250 >B7GHF6.1 B7GHF6_ANOFW Biotin carboxylase Length = 450 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 176/246 (71%), Positives = 217/246 (88%) Query: 3 IQKVLIANRGEIAVRIIRACRELGISTVAVYSEPDRDSLHVRLADEAYCIGPMPSKDSYL 62 I+K+LIANRGEIAVRIIRAC+ELGI TVAV+SE DR++LHV+LADEAYCIGP SKDSYL Sbjct: 2 IKKLLIANRGEIAVRIIRACKELGIETVAVFSEADREALHVQLADEAYCIGPKTSKDSYL 61 Query: 63 NFTNIMSVATLTECDAVHPGYGFLAENADFAEICESCNITFIGPSPEAITRMGDKAVAKE 122 NFTNIMSVATLT+CDA+HPGYGFLAENADFAE+C CN+TF+GPSPEAIT+MG K VA+E Sbjct: 62 NFTNIMSVATLTQCDAIHPGYGFLAENADFAELCRECNVTFVGPSPEAITKMGTKDVARE 121 Query: 123 TMKRAGVPIIPGSDGLVGDVEEAVMLGRDIGYPIIVKATAGGGGKGIRIAEDEESLVKQI 182 TM++AGVPI+PGS G++ ++EA+ L +IGYP+I+KATAGGGGKGIR+A +E+ L+K I Sbjct: 122 TMRQAGVPIVPGSQGIIESMDEAIALANEIGYPVIIKATAGGGGKGIRVARNEQELIKGI 181 Query: 183 TAAQQEAQKAFGNAGVYLEKFLTGMKHVEIQIIADNHGNVVHLGERDCSVQRRRQKLIEE 242 T QQEA AFGN GVY+EK++ +HVEIQ++AD++GNV+HLGERDC++QRR QKL+EE Sbjct: 182 TITQQEAATAFGNPGVYIEKYIEDFRHVEIQVLADSYGNVIHLGERDCTIQRRLQKLLEE 241 Query: 243 APCSVL 248 P VL Sbjct: 242 TPSPVL 247 >C5D475.1 C5D475_9BACI Acetyl-CoA carboxylase, biotin carboxylase Length = 450 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 180/246 (73%), Positives = 213/246 (86%) Query: 3 IQKVLIANRGEIAVRIIRACRELGISTVAVYSEPDRDSLHVRLADEAYCIGPMPSKDSYL 62 I+KVLIANRGEIAVRIIRAC+ELGI TVAV+SE DRD+LHV+LADEAYCIGP SKDSYL Sbjct: 2 IKKVLIANRGEIAVRIIRACKELGIETVAVFSEADRDALHVQLADEAYCIGPTASKDSYL 61 Query: 63 NFTNIMSVATLTECDAVHPGYGFLAENADFAEICESCNITFIGPSPEAITRMGDKAVAKE 122 NFTNIMSVATLT CDA+HPGYGFLAENA FAE+C CNITFIGPSPEAIT+MG K VA+E Sbjct: 62 NFTNIMSVATLTGCDAIHPGYGFLAENAAFAELCRECNITFIGPSPEAITKMGIKDVARE 121 Query: 123 TMKRAGVPIIPGSDGLVGDVEEAVMLGRDIGYPIIVKATAGGGGKGIRIAEDEESLVKQI 182 TM+ AGVPI+PGS G++ V+EA+ L +IGYP+I+KATAGGGGKGIR+A +E+ LVK I Sbjct: 122 TMREAGVPIVPGSKGIIESVDEAIALANEIGYPVIIKATAGGGGKGIRVARNEQELVKGI 181 Query: 183 TAAQQEAQKAFGNAGVYLEKFLTGMKHVEIQIIADNHGNVVHLGERDCSVQRRRQKLIEE 242 QQEA AFGN GVY+EK++ +HVEIQ++AD++GN++HLGERDCS+QRR QKL+EE Sbjct: 182 NITQQEAATAFGNPGVYIEKYIEDFRHVEIQVLADSYGNIIHLGERDCSIQRRLQKLVEE 241 Query: 243 APCSVL 248 AP L Sbjct: 242 APSPAL 247 >A6CNF7.1 A6CNF7_9BACI Acetyl-CoA carboxylase EC=6.4.1.2 Length = 450 Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust. Identities = 176/246 (71%), Positives = 211/246 (85%) Query: 3 IQKVLIANRGEIAVRIIRACRELGISTVAVYSEPDRDSLHVRLADEAYCIGPMPSKDSYL 62 I+K+LIANRGEIAVR+IRACRE+GI +VAVYSE DR++LHV+LADEAYCIGP SKDSYL Sbjct: 2 IKKLLIANRGEIAVRVIRACREMGIESVAVYSEADREALHVQLADEAYCIGPTASKDSYL 61 Query: 63 NFTNIMSVATLTECDAVHPGYGFLAENADFAEICESCNITFIGPSPEAITRMGDKAVAKE 122 NFTNI+SVA LT+CDA+HPGYGFLAENADFAE+C CNITF+GPSPEAI++MG K VA+E Sbjct: 62 NFTNIISVAKLTDCDAIHPGYGFLAENADFAELCRECNITFVGPSPEAISKMGTKDVARE 121 Query: 123 TMKRAGVPIIPGSDGLVGDVEEAVMLGRDIGYPIIVKATAGGGGKGIRIAEDEESLVKQI 182 TM++AGVPI+PGS G+V D EEAV L IGYP+I+KATAGGGGKGIR+A+ E+ L+K + Sbjct: 122 TMRKAGVPIVPGSQGIVKDAEEAVSLAEKIGYPVIIKATAGGGGKGIRVAKTEQELIKGV 181 Query: 183 TAAQQEAQKAFGNAGVYLEKFLTGMKHVEIQIIADNHGNVVHLGERDCSVQRRRQKLIEE 242 QQEA AFGN GVY+EKF+ +HVEIQ++ DN GNV+HLGERDC++QRR QKLIEE Sbjct: 182 NITQQEAATAFGNPGVYIEKFIEDFRHVEIQVLGDNFGNVIHLGERDCTIQRRLQKLIEE 241 Query: 243 APCSVL 248 P L Sbjct: 242 TPSPAL 247 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,578,032,655 Number of extensions: 64068771 Number of successful extensions: 189985 Number of sequences better than 1.0e-05: 5220 Number of HSP's gapped: 189573 Number of HSP's successfully gapped: 5553 Length of query: 274 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 140 Effective length of database: 1,798,280,193 Effective search space: 251759227020 Effective search space used: 251759227020 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)